| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485332
Identifier: 124485332
GI number: 124485332
Start: 478138
End: 479259
Strand: Reverse
Name: 124485332
Synonym: Mlab_0507
Alternate gene names: NA
Gene position: 479259-478138 (Counterclockwise)
Preceding gene: 124485333
Following gene: 124485331
Centisome position: 26.55
GC content: 50.27
Gene sequence:
>1122_bases ATGTGCGCAAAAGCTAAACATATGAGGCAGAAACAACCCGGTTCCCAGATCGACCGAATAACGATCCGCGGATTTCGTTC GATTCGGTCCTGCGATCTCAAGCTTCGCGACATAAATATTCTGATTGGAGCGAACGGTGCGGGAAAATCGAATTTTCTCG CGGTATTCTGCATGATGGAACAGATGTTTGCCAAACGTCTGCAGAAGTACGTTACCTATAACGGCGGTCCTGACTCCCTC CTCTGGTTTGGGAGACAGGAAACCGAGAAGATAAGTGTCGGCATATACTTCGGAAATAACGGATACGGGTTCGATCTCAA ACCAACCAAAGACAATCGGCTGATGTTCGAGGATGAATGGTTCTCCTGGAACCTCCTCAAAGAGAATAGATCGCTTGGCT CAGGACATCTGGAGTCTCTGTATGATGCCGGAACCGGGACATTCATCGATAAATACGTGTTGAAACACGTGCATCAGTGG ATCGTCTACCACTTCCACGACACCGGAGACAATGCAAAAGTCAAACAGATCCATGCGATCAATGATAACATTTGTCTCAG ACCGGATGCAGGAAATCTTGCCGCATATCTCTATCTGATAAAACTGACTGCTCCAAACAATTATCAGAGGATCAGAAAAG TGATCCAGCTTGCGGCTCCCTTCTTTGATGACTTCATCCTGCGGCCAAAACCAGACAATCCCGAAATGATCGAGCTCGAA TGGTGTTCGACCCATGGGAAAACGCCGTTCAAAGCCGCCGACTTCTCCGACGGGACTCTGCGGTTCATCTGCCTTGCAAC CCTGCTTCTTCAGCCGGTCGAGAACATCCCGGAAACCGTGCTGCTCGAGGAGCCTGAGTTAGGTCTGCACCCGTATGCCC TCTCGCTGCTTGCAGCCCTGATAAGATCAGCCGGGCTTGTCAAACAGATCATCGTCTCGACACAGTCGGCTCTGCTCCTC AGCGAGTTTGAGCCAAAGGATATCATCGTTGTCGACTGGCAAAATGACGCCTCCACATTCCGCAGACTCGAGGACGATGA AGATCTCCAGAACTGGATCGCACAGGATTATTCGCTTGGGGAACTCTGGGAAAAGAACATCTTTGGCGGGAGACCGCAGT AG
Upstream 100 bases:
>100_bases ATCTTTGATTTGCGAGTGTGCAGTGCTTTTCGAGCACTGTTATATTTCACCGGTCATTTCCGATCCGCGTTCATGTCTGT GGAAGATATCCTTATCACTC
Downstream 100 bases:
>100_bases GCATGGTCACCCTGTTCATCTCCTGCGAAGGGTATACCGAAGAGGTTTTTATCAAACGCCTGATGGCAAAGGAACTGGCG CATCTGGGAATCACGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMMEQMFAKRLQKYVTYNGGPDSL LWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEWFSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQW IVYHFHDTGDNAKVKQIHAINDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAALIRSAGLVKQIIVSTQSALLL SEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLGELWEKNIFGGRPQ
Sequences:
>Translated_373_residues MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMMEQMFAKRLQKYVTYNGGPDSL LWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEWFSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQW IVYHFHDTGDNAKVKQIHAINDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAALIRSAGLVKQIIVSTQSALLL SEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLGELWEKNIFGGRPQ >Mature_373_residues MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMMEQMFAKRLQKYVTYNGGPDSL LWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEWFSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQW IVYHFHDTGDNAKVKQIHAINDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAALIRSAGLVKQIIVSTQSALLL SEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLGELWEKNIFGGRPQ
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42609; Mature: 42609
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMME CCCCHHHHHHCCCCCHHCEEEHHHHHHHHHCCEEEEEEEEEEECCCCCCCHHHHHHHHHH QMFAKRLQKYVTYNGGPDSLLWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEW HHHHHHHHHHEECCCCCCCEEEECCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCC FSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQWIVYHFHDTGDNAKVKQIHAI CEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEE NDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE CCCEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAAL EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH IRSAGLVKQIIVSTQSALLLSEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLG HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHCCCCHH ELWEKNIFGGRPQ HHHHHHCCCCCCC >Mature Secondary Structure MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMME CCCCHHHHHHCCCCCHHCEEEHHHHHHHHHCCEEEEEEEEEEECCCCCCCHHHHHHHHHH QMFAKRLQKYVTYNGGPDSLLWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEW HHHHHHHHHHEECCCCCCCEEEECCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCC FSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQWIVYHFHDTGDNAKVKQIHAI CEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEE NDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE CCCEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAAL EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH IRSAGLVKQIIVSTQSALLLSEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLG HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHCCCCHH ELWEKNIFGGRPQ HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA