Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124485332

Identifier: 124485332

GI number: 124485332

Start: 478138

End: 479259

Strand: Reverse

Name: 124485332

Synonym: Mlab_0507

Alternate gene names: NA

Gene position: 479259-478138 (Counterclockwise)

Preceding gene: 124485333

Following gene: 124485331

Centisome position: 26.55

GC content: 50.27

Gene sequence:

>1122_bases
ATGTGCGCAAAAGCTAAACATATGAGGCAGAAACAACCCGGTTCCCAGATCGACCGAATAACGATCCGCGGATTTCGTTC
GATTCGGTCCTGCGATCTCAAGCTTCGCGACATAAATATTCTGATTGGAGCGAACGGTGCGGGAAAATCGAATTTTCTCG
CGGTATTCTGCATGATGGAACAGATGTTTGCCAAACGTCTGCAGAAGTACGTTACCTATAACGGCGGTCCTGACTCCCTC
CTCTGGTTTGGGAGACAGGAAACCGAGAAGATAAGTGTCGGCATATACTTCGGAAATAACGGATACGGGTTCGATCTCAA
ACCAACCAAAGACAATCGGCTGATGTTCGAGGATGAATGGTTCTCCTGGAACCTCCTCAAAGAGAATAGATCGCTTGGCT
CAGGACATCTGGAGTCTCTGTATGATGCCGGAACCGGGACATTCATCGATAAATACGTGTTGAAACACGTGCATCAGTGG
ATCGTCTACCACTTCCACGACACCGGAGACAATGCAAAAGTCAAACAGATCCATGCGATCAATGATAACATTTGTCTCAG
ACCGGATGCAGGAAATCTTGCCGCATATCTCTATCTGATAAAACTGACTGCTCCAAACAATTATCAGAGGATCAGAAAAG
TGATCCAGCTTGCGGCTCCCTTCTTTGATGACTTCATCCTGCGGCCAAAACCAGACAATCCCGAAATGATCGAGCTCGAA
TGGTGTTCGACCCATGGGAAAACGCCGTTCAAAGCCGCCGACTTCTCCGACGGGACTCTGCGGTTCATCTGCCTTGCAAC
CCTGCTTCTTCAGCCGGTCGAGAACATCCCGGAAACCGTGCTGCTCGAGGAGCCTGAGTTAGGTCTGCACCCGTATGCCC
TCTCGCTGCTTGCAGCCCTGATAAGATCAGCCGGGCTTGTCAAACAGATCATCGTCTCGACACAGTCGGCTCTGCTCCTC
AGCGAGTTTGAGCCAAAGGATATCATCGTTGTCGACTGGCAAAATGACGCCTCCACATTCCGCAGACTCGAGGACGATGA
AGATCTCCAGAACTGGATCGCACAGGATTATTCGCTTGGGGAACTCTGGGAAAAGAACATCTTTGGCGGGAGACCGCAGT
AG

Upstream 100 bases:

>100_bases
ATCTTTGATTTGCGAGTGTGCAGTGCTTTTCGAGCACTGTTATATTTCACCGGTCATTTCCGATCCGCGTTCATGTCTGT
GGAAGATATCCTTATCACTC

Downstream 100 bases:

>100_bases
GCATGGTCACCCTGTTCATCTCCTGCGAAGGGTATACCGAAGAGGTTTTTATCAAACGCCTGATGGCAAAGGAACTGGCG
CATCTGGGAATCACGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMMEQMFAKRLQKYVTYNGGPDSL
LWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEWFSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQW
IVYHFHDTGDNAKVKQIHAINDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE
WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAALIRSAGLVKQIIVSTQSALLL
SEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLGELWEKNIFGGRPQ

Sequences:

>Translated_373_residues
MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMMEQMFAKRLQKYVTYNGGPDSL
LWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEWFSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQW
IVYHFHDTGDNAKVKQIHAINDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE
WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAALIRSAGLVKQIIVSTQSALLL
SEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLGELWEKNIFGGRPQ
>Mature_373_residues
MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMMEQMFAKRLQKYVTYNGGPDSL
LWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEWFSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQW
IVYHFHDTGDNAKVKQIHAINDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE
WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAALIRSAGLVKQIIVSTQSALLL
SEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLGELWEKNIFGGRPQ

Specific function: Unknown

COG id: COG4637

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42609; Mature: 42609

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMME
CCCCHHHHHHCCCCCHHCEEEHHHHHHHHHCCEEEEEEEEEEECCCCCCCHHHHHHHHHH
QMFAKRLQKYVTYNGGPDSLLWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEW
HHHHHHHHHHEECCCCCCCEEEECCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCC
FSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQWIVYHFHDTGDNAKVKQIHAI
CEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEE
NDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE
CCCEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAAL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
IRSAGLVKQIIVSTQSALLLSEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLG
HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHCCCCHH
ELWEKNIFGGRPQ
HHHHHHCCCCCCC
>Mature Secondary Structure
MCAKAKHMRQKQPGSQIDRITIRGFRSIRSCDLKLRDINILIGANGAGKSNFLAVFCMME
CCCCHHHHHHCCCCCHHCEEEHHHHHHHHHCCEEEEEEEEEEECCCCCCCHHHHHHHHHH
QMFAKRLQKYVTYNGGPDSLLWFGRQETEKISVGIYFGNNGYGFDLKPTKDNRLMFEDEW
HHHHHHHHHHEECCCCCCCEEEECCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEECCC
FSWNLLKENRSLGSGHLESLYDAGTGTFIDKYVLKHVHQWIVYHFHDTGDNAKVKQIHAI
CEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEE
NDNICLRPDAGNLAAYLYLIKLTAPNNYQRIRKVIQLAAPFFDDFILRPKPDNPEMIELE
CCCEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
WCSTHGKTPFKAADFSDGTLRFICLATLLLQPVENIPETVLLEEPELGLHPYALSLLAAL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
IRSAGLVKQIIVSTQSALLLSEFEPKDIIVVDWQNDASTFRRLEDDEDLQNWIAQDYSLG
HHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHCCCCHH
ELWEKNIFGGRPQ
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA