| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485298
Identifier: 124485298
GI number: 124485298
Start: 449573
End: 450604
Strand: Reverse
Name: 124485298
Synonym: Mlab_0473
Alternate gene names: NA
Gene position: 450604-449573 (Counterclockwise)
Preceding gene: 124485299
Following gene: 124485297
Centisome position: 24.96
GC content: 52.23
Gene sequence:
>1032_bases ATGAGCGAAGCACAGAAGATCCTTGTTTCAATGACCTGTCCGTCATGCGGAGGTCAGGTTCAGTGCGAAGAAGGAGAGGA TCTAGTCCTCTGCAAGTTCTGTGAATCCGTGTTCGCACTGACAACAGACGAAGGGGCAAATAAGGTCATGTACAAAATGA CCGTCGATAAGGACAAGGCCCTTGCGAAAGTCAATGCATGGTTTGGAACAGGACCGAAGGCAAAAGATCTGCAGAAGACA GCGGCGATTACCGAAGCATACCCCATGTATCTTCCGTTCTGGCGTCTGATCGCCAGAGGAAAGGCCTGTGTCTGCGGTAT CGAAGAACAGAGAACCGGAAAGGATAATCAGAAGGTCGAGATCCCTCGCGAGGCACTCATCAACCGCGAGTACATCTACT CGGAAATTGCCTGCGAAGCAGGAGATCTTGGTATCCAAAGCATCGTGATTCCGGACAGAGCCGAGGCAATCTCCTATGAT GATCAGGAGATCGTCACATTCGGCGTGACCTCCTCTCGTGATGCCGCATTTGATGAAGGCGGCAGAGCGATCCGGAAGAC GGCAGTCGAAGACGGCAGTGCCCGGATGGACAAGGTCCACTTCTCGCAGTCGTTCTGTTTCCCCAAAGCCTTCACCTTAG TCTACTATCCGTTTTGGATTGTGAGGTATACATATGAAGGCAGAACCTACTTTGCCACCGTCGACGGCATCACGGCACGG GTCGTTTCAGGCAGAGCGCCGGGAGATGCGGGCAGTCAAAGTACGGCAGCAGGTATCGGCGGAGCGCTTTCCGGCGGAGC AGTGGGTCTTGGAATTGGACTCGCCATCGTTACCGAAGGTACGGACATCGGGATTGGTGTTCTCGTGGTCGGATTCATCG CGGCCGTCGCACTCCTTGGATACTTCTACAACAGATTCAGATATGGAGACGAAATCTTAGAAGGAGCGCTGAACGGAAAA GGCCTCAAATCAGGCAGAACCCAGAAAAAAGTACAGCCCATCTACAATGAAACATATGACTACTTCAAATGA
Upstream 100 bases:
>100_bases CGATATTTTTCGTTCTGATCATTGCCGGATTTTTCGCAGGAAAACTTCTTGCAGGCAAAGTGGTCGAACGGCAGAAACCC GCTAAGGAGGTGAAGGCAGA
Downstream 100 bases:
>100_bases AGGTGATCCAAGATGCTGTTAAAAGAACTTAAATGCCCAGGATGCGGTGCACCTCTCAAATCCAAGGAACGCGACATGAT GCTGGCCTGCAGTCACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSEAQKILVSMTCPSCGGQVQCEEGEDLVLCKFCESVFALTTDEGANKVMYKMTVDKDKALAKVNAWFGTGPKAKDLQKT AAITEAYPMYLPFWRLIARGKACVCGIEEQRTGKDNQKVEIPREALINREYIYSEIACEAGDLGIQSIVIPDRAEAISYD DQEIVTFGVTSSRDAAFDEGGRAIRKTAVEDGSARMDKVHFSQSFCFPKAFTLVYYPFWIVRYTYEGRTYFATVDGITAR VVSGRAPGDAGSQSTAAGIGGALSGGAVGLGIGLAIVTEGTDIGIGVLVVGFIAAVALLGYFYNRFRYGDEILEGALNGK GLKSGRTQKKVQPIYNETYDYFK
Sequences:
>Translated_343_residues MSEAQKILVSMTCPSCGGQVQCEEGEDLVLCKFCESVFALTTDEGANKVMYKMTVDKDKALAKVNAWFGTGPKAKDLQKT AAITEAYPMYLPFWRLIARGKACVCGIEEQRTGKDNQKVEIPREALINREYIYSEIACEAGDLGIQSIVIPDRAEAISYD DQEIVTFGVTSSRDAAFDEGGRAIRKTAVEDGSARMDKVHFSQSFCFPKAFTLVYYPFWIVRYTYEGRTYFATVDGITAR VVSGRAPGDAGSQSTAAGIGGALSGGAVGLGIGLAIVTEGTDIGIGVLVVGFIAAVALLGYFYNRFRYGDEILEGALNGK GLKSGRTQKKVQPIYNETYDYFK >Mature_342_residues SEAQKILVSMTCPSCGGQVQCEEGEDLVLCKFCESVFALTTDEGANKVMYKMTVDKDKALAKVNAWFGTGPKAKDLQKTA AITEAYPMYLPFWRLIARGKACVCGIEEQRTGKDNQKVEIPREALINREYIYSEIACEAGDLGIQSIVIPDRAEAISYDD QEIVTFGVTSSRDAAFDEGGRAIRKTAVEDGSARMDKVHFSQSFCFPKAFTLVYYPFWIVRYTYEGRTYFATVDGITARV VSGRAPGDAGSQSTAAGIGGALSGGAVGLGIGLAIVTEGTDIGIGVLVVGFIAAVALLGYFYNRFRYGDEILEGALNGKG LKSGRTQKKVQPIYNETYDYFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37256; Mature: 37125
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAQKILVSMTCPSCGGQVQCEEGEDLVLCKFCESVFALTTDEGANKVMYKMTVDKDKA CCCHHEEEEEEECCCCCCEEEECCCCCEEHHHHHHHHHEEECCCCCCEEEEEEEECCCHH LAKVNAWFGTGPKAKDLQKTAAITEAYPMYLPFWRLIARGKACVCGIEEQRTGKDNQKVE HHEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCCEEE IPREALINREYIYSEIACEAGDLGIQSIVIPDRAEAISYDDQEIVTFGVTSSRDAAFDEG CCHHHHHCHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCCCCEEEEEECCCCCCCCCCCC GRAIRKTAVEDGSARMDKVHFSQSFCFPKAFTLVYYPFWIVRYTYEGRTYFATVDGITAR CHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEECCEEEEEEECCCEEE VVSGRAPGDAGSQSTAAGIGGALSGGAVGLGIGLAIVTEGTDIGIGVLVVGFIAAVALLG EECCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH YFYNRFRYGDEILEGALNGKGLKSGRTQKKVQPIYNETYDYFK HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHCC >Mature Secondary Structure SEAQKILVSMTCPSCGGQVQCEEGEDLVLCKFCESVFALTTDEGANKVMYKMTVDKDKA CCHHEEEEEEECCCCCCEEEECCCCCEEHHHHHHHHHEEECCCCCCEEEEEEEECCCHH LAKVNAWFGTGPKAKDLQKTAAITEAYPMYLPFWRLIARGKACVCGIEEQRTGKDNQKVE HHEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCCEEE IPREALINREYIYSEIACEAGDLGIQSIVIPDRAEAISYDDQEIVTFGVTSSRDAAFDEG CCHHHHHCHHHHHHHHHCCCCCCCCEEEECCCCHHHCCCCCCEEEEEECCCCCCCCCCCC GRAIRKTAVEDGSARMDKVHFSQSFCFPKAFTLVYYPFWIVRYTYEGRTYFATVDGITAR CHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEECCEEEEEEECCCEEE VVSGRAPGDAGSQSTAAGIGGALSGGAVGLGIGLAIVTEGTDIGIGVLVVGFIAAVALLG EECCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH YFYNRFRYGDEILEGALNGKGLKSGRTQKKVQPIYNETYDYFK HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA