Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485299

Identifier: 124485299

GI number: 124485299

Start: 450601

End: 451371

Strand: Reverse

Name: 124485299

Synonym: Mlab_0474

Alternate gene names: NA

Gene position: 451371-450601 (Counterclockwise)

Preceding gene: 124485300

Following gene: 124485298

Centisome position: 25.01

GC content: 52.4

Gene sequence:

>771_bases
ATGCCCGATTTTCAGTGTCCAAAGTGCGGCGCAGCACTTCAGGTCAAACCAGGCACACAGATGGCGACCTGCTCATTCTG
TGGCACGGTCACTTATATCGATCGAAGTTCTGCGCTGTTCTTTTATCTGCTCCCCTTCTCCATAAACGAGGGTGCAGCAA
AAGGGATTTTTAAACGCTGGACTGCCGGCCCGGCGCAGGCAAAAGATCTCGAGTCAGCAGCCAGGATTACGAAACTCACC
AAAGAGTTCTTCCCGGTGTTCCGGTTCCGCCGGACAATAAACGGCAGGGAAACCGTTTTTGCAAAACCTGCGAAAGGGAC
ACTCCTTCCTGGAATGCAGGACCTCACGATTCCTCCGGGAAACGTTGTCGTCTATGATGCGAAAGCCTCGACCGGGGACG
CAGACGTGATCCAGCCGGATATTGCAATCGATTCGTATCTTCCGGAACTCGCCGGAACCCCCATCGACCAGGCACTCGTG
TATTTCCCGATTTACGAAATCTCCTATGAATATCAGGGAGCTTCCTACCAGGCAGTCATCGACGGATCATCCGGAGCAGT
CTATACTACCTCGTCTCCCACCCGCAGTTCCAGTGCATACATCGCGGTCATGGGACTTGCCTTCACCTTAGGCCTTCTTG
GAAGTATTCTCGGCGTAATGGTGAATCCGATATTTTTCGTTCTGATCATTGCCGGATTTTTCGCAGGAAAACTTCTTGCA
GGCAAAGTGGTCGAACGGCAGAAACCCGCTAAGGAGGTGAAGGCAGAATGA

Upstream 100 bases:

>100_bases
TGGTGCTGTTGAGAAAAAAACGGCCTGCATTCTCCGAATCAACGATCTGTAGAGCGTATCGGGAAGATATCCTTATCCTC
TAAGACACCAAGAAAAATAT

Downstream 100 bases:

>100_bases
GCGAAGCACAGAAGATCCTTGTTTCAATGACCTGTCCGTCATGCGGAGGTCAGGTTCAGTGCGAAGAAGGAGAGGATCTA
GTCCTCTGCAAGTTCTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPDFQCPKCGAALQVKPGTQMATCSFCGTVTYIDRSSALFFYLLPFSINEGAAKGIFKRWTAGPAQAKDLESAARITKLT
KEFFPVFRFRRTINGRETVFAKPAKGTLLPGMQDLTIPPGNVVVYDAKASTGDADVIQPDIAIDSYLPELAGTPIDQALV
YFPIYEISYEYQGASYQAVIDGSSGAVYTTSSPTRSSSAYIAVMGLAFTLGLLGSILGVMVNPIFFVLIIAGFFAGKLLA
GKVVERQKPAKEVKAE

Sequences:

>Translated_256_residues
MPDFQCPKCGAALQVKPGTQMATCSFCGTVTYIDRSSALFFYLLPFSINEGAAKGIFKRWTAGPAQAKDLESAARITKLT
KEFFPVFRFRRTINGRETVFAKPAKGTLLPGMQDLTIPPGNVVVYDAKASTGDADVIQPDIAIDSYLPELAGTPIDQALV
YFPIYEISYEYQGASYQAVIDGSSGAVYTTSSPTRSSSAYIAVMGLAFTLGLLGSILGVMVNPIFFVLIIAGFFAGKLLA
GKVVERQKPAKEVKAE
>Mature_255_residues
PDFQCPKCGAALQVKPGTQMATCSFCGTVTYIDRSSALFFYLLPFSINEGAAKGIFKRWTAGPAQAKDLESAARITKLTK
EFFPVFRFRRTINGRETVFAKPAKGTLLPGMQDLTIPPGNVVVYDAKASTGDADVIQPDIAIDSYLPELAGTPIDQALVY
FPIYEISYEYQGASYQAVIDGSSGAVYTTSSPTRSSSAYIAVMGLAFTLGLLGSILGVMVNPIFFVLIIAGFFAGKLLAG
KVVERQKPAKEVKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27515; Mature: 27384

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFQCPKCGAALQVKPGTQMATCSFCGTVTYIDRSSALFFYLLPFSINEGAAKGIFKRW
CCCCCCCCCCCEEEECCCCCEEEEECCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHH
TAGPAQAKDLESAARITKLTKEFFPVFRFRRTINGRETVFAKPAKGTLLPGMQDLTIPPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
NVVVYDAKASTGDADVIQPDIAIDSYLPELAGTPIDQALVYFPIYEISYEYQGASYQAVI
CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEEEEEEEEECCCEEEEEE
DGSSGAVYTTSSPTRSSSAYIAVMGLAFTLGLLGSILGVMVNPIFFVLIIAGFFAGKLLA
ECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKVVERQKPAKEVKAE
HHHHHHCCCHHHHCCC
>Mature Secondary Structure 
PDFQCPKCGAALQVKPGTQMATCSFCGTVTYIDRSSALFFYLLPFSINEGAAKGIFKRW
CCCCCCCCCCEEEECCCCCEEEEECCCEEEEEECCCEEEEEEEEEECCCCHHHHHHHHH
TAGPAQAKDLESAARITKLTKEFFPVFRFRRTINGRETVFAKPAKGTLLPGMQDLTIPPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
NVVVYDAKASTGDADVIQPDIAIDSYLPELAGTPIDQALVYFPIYEISYEYQGASYQAVI
CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEEEEEEEEEECCCEEEEEE
DGSSGAVYTTSSPTRSSSAYIAVMGLAFTLGLLGSILGVMVNPIFFVLIIAGFFAGKLLA
ECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKVVERQKPAKEVKAE
HHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA