| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485195
Identifier: 124485195
GI number: 124485195
Start: 346055
End: 346810
Strand: Reverse
Name: 124485195
Synonym: Mlab_0368
Alternate gene names: NA
Gene position: 346810-346055 (Counterclockwise)
Preceding gene: 124485196
Following gene: 124485194
Centisome position: 19.21
GC content: 48.54
Gene sequence:
>756_bases ATGACATTATCTGAGATCCTAAGAGAACATTCACCGGCTTTAGTAGCTCTCTCCGGCGGGACCGACAGTATGACCCTTCT CGCGGCATTCGTCAAAGAGGGGGGACCAGTCTCTGCAGCCACCATAAGATCAGAGTTCACTCCTCCAGATGAAGTCACAA GAGCGGAGCATTTCGCCCGCAGACTTGGGGTAAACTGGACGGTTATCGATGTATCTGTTTTATCCAAAGAGAACCTGCGA TTCAATCCGCAGGACAGGTGCTATATCTGCAAAAAACTCATCATGAAAAAAATGCTCGAAGCTGCCGACGGAAAAACCGT CTGTGACGGGACCCATGCAGATGATGCAGCAGAGGAACGGCCCGGAAGAAAAGCCCTCAAAGAACTTGGAATCGTCAGCC CGTTTGCATTGGCAGGAATCGGAAAAAAAGAGATATACGCACTCGCGAAGGAGCTTGGTGTGCCGGTAATTCCCTCATCA TCGTGTCTTGCCACACGGATCCCGTTCGGCGAAAAAATCACAGAAGACGACCTGAAAAAGATCGCAGACTCTGAGTCTTT CCTGCGAAAGAAAGGAATTAGAGGGATGCTTCGGGTACGTCTTTCATCCGGGCATGCCGTCATCGAAACCGAAAAAAATG AGATGGCCAATGCAGAATTATATGCAGATGATCTGAAGGCCTTCGGGTTTTCCACAATATCGGTCTCAGAATACAAAACA GGAGGTTCACAGACATGGAACAAAATAGAGCAGTAA
Upstream 100 bases:
>100_bases AAAACGAAGATATATGGTCACCTGAATTCACCTTCTTCCTGTCGGCATACTTTGCAAAAAGCTCTCATGCGGTCAGAAAA CTCCGGGTACTTGAACACCA
Downstream 100 bases:
>100_bases TGGTCAGGATCGGGGAGCTTTGGCTCAAAAGCGAGCCGGTCAAAAAACAGTTCATGCTTGCGCTAACGCGAAATATCAAA GCAGCTCTGGATACGCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTLSEILREHSPALVALSGGTDSMTLLAAFVKEGGPVSAATIRSEFTPPDEVTRAEHFARRLGVNWTVIDVSVLSKENLR FNPQDRCYICKKLIMKKMLEAADGKTVCDGTHADDAAEERPGRKALKELGIVSPFALAGIGKKEIYALAKELGVPVIPSS SCLATRIPFGEKITEDDLKKIADSESFLRKKGIRGMLRVRLSSGHAVIETEKNEMANAELYADDLKAFGFSTISVSEYKT GGSQTWNKIEQ
Sequences:
>Translated_251_residues MTLSEILREHSPALVALSGGTDSMTLLAAFVKEGGPVSAATIRSEFTPPDEVTRAEHFARRLGVNWTVIDVSVLSKENLR FNPQDRCYICKKLIMKKMLEAADGKTVCDGTHADDAAEERPGRKALKELGIVSPFALAGIGKKEIYALAKELGVPVIPSS SCLATRIPFGEKITEDDLKKIADSESFLRKKGIRGMLRVRLSSGHAVIETEKNEMANAELYADDLKAFGFSTISVSEYKT GGSQTWNKIEQ >Mature_250_residues TLSEILREHSPALVALSGGTDSMTLLAAFVKEGGPVSAATIRSEFTPPDEVTRAEHFARRLGVNWTVIDVSVLSKENLRF NPQDRCYICKKLIMKKMLEAADGKTVCDGTHADDAAEERPGRKALKELGIVSPFALAGIGKKEIYALAKELGVPVIPSSS CLATRIPFGEKITEDDLKKIADSESFLRKKGIRGMLRVRLSSGHAVIETEKNEMANAELYADDLKAFGFSTISVSEYKTG GSQTWNKIEQ
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Synechocystis PCC 6803 slr1717 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 27391; Mature: 27260
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSEILREHSPALVALSGGTDSMTLLAAFVKEGGPVSAATIRSEFTPPDEVTRAEHFAR CCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHH RLGVNWTVIDVSVLSKENLRFNPQDRCYICKKLIMKKMLEAADGKTVCDGTHADDAAEER HHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHC PGRKALKELGIVSPFALAGIGKKEIYALAKELGVPVIPSSSCLATRIPFGEKITEDDLKK CHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHH IADSESFLRKKGIRGMLRVRLSSGHAVIETEKNEMANAELYADDLKAFGFSTISVSEYKT HHCHHHHHHHHCCCEEEEEEECCCCEEEEECCCHHHCHHHHHHHHHHHCCCEEEHHHHCC GGSQTWNKIEQ CCHHHHHHHCC >Mature Secondary Structure TLSEILREHSPALVALSGGTDSMTLLAAFVKEGGPVSAATIRSEFTPPDEVTRAEHFAR CHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHH RLGVNWTVIDVSVLSKENLRFNPQDRCYICKKLIMKKMLEAADGKTVCDGTHADDAAEER HHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHC PGRKALKELGIVSPFALAGIGKKEIYALAKELGVPVIPSSSCLATRIPFGEKITEDDLKK CHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHH IADSESFLRKKGIRGMLRVRLSSGHAVIETEKNEMANAELYADDLKAFGFSTISVSEYKT HHCHHHHHHHHCCCEEEEEEECCCCEEEEECCCHHHCHHHHHHHHHHHCCCEEEHHHHCC GGSQTWNKIEQ CCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]