Click here to switch to the map view.

The map label for this gene is hypC [H]

Identifier: 124485193

GI number: 124485193

Start: 344431

End: 344667

Strand: Reverse

Name: hypC [H]

Synonym: Mlab_0366

Alternate gene names: 124485193

Gene position: 344667-344431 (Counterclockwise)

Preceding gene: 124485194

Following gene: 124485192

Centisome position: 19.1

GC content: 48.1

Gene sequence:

>237_bases
ATGTGTATTGCAGTTCCCGCTGAAATTCTTGAGATACGCGATGGAAATATCGCACTTGTTGATTACGGCGAACTCCAGCA
GGAGGTCCGCATCGATTTGGTTGACGTAAAAGTCGGCGAGTTCGTTCTTGTACATGTAGGTTTTGCCATTCAGCGGCTTT
CGCGTGAGGAAGGGTTGGAAACGCGGGAACTGTTTAAAGAAGTCTACAAAGCGATGGAAGAAGCGGACCATGCATGA

Upstream 100 bases:

>100_bases
GGTAGTAATACCTCGGGAGTTCAAATCTCCCTCTCGGCGCCATTTTGAACCGGTCTCTTTTCGCTTTCTTTATCACTCAT
ATCAACCAATATACCATCAT

Downstream 100 bases:

>100_bases
ATCCGGCATTGCCTATGACGTTTATGTGACCTCAAAGCGGGCAGCAGAAGAGAATCACGCAAAACTGGTGAAGACCATTT
ATGTGGATGTCGGATCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MCIAVPAEILEIRDGNIALVDYGELQQEVRIDLVDVKVGEFVLVHVGFAIQRLSREEGLETRELFKEVYKAMEEADHA

Sequences:

>Translated_78_residues
MCIAVPAEILEIRDGNIALVDYGELQQEVRIDLVDVKVGEFVLVHVGFAIQRLSREEGLETRELFKEVYKAMEEADHA
>Mature_78_residues
MCIAVPAEILEIRDGNIALVDYGELQQEVRIDLVDVKVGEFVLVHVGFAIQRLSREEGLETRELFKEVYKAMEEADHA

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8858; Mature: 8858

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIAVPAEILEIRDGNIALVDYGELQQEVRIDLVDVKVGEFVLVHVGFAIQRLSREEGLE
CEEECCHHHHEECCCCEEEEEHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
TRELFKEVYKAMEEADHA
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCIAVPAEILEIRDGNIALVDYGELQQEVRIDLVDVKVGEFVLVHVGFAIQRLSREEGLE
CEEECCHHHHEECCCCEEEEEHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
TRELFKEVYKAMEEADHA
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]