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The map label for this gene is hypA [H]

Identifier: 124485192

GI number: 124485192

Start: 344094

End: 344438

Strand: Reverse

Name: hypA [H]

Synonym: Mlab_0365

Alternate gene names: 124485192

Gene position: 344438-344094 (Counterclockwise)

Preceding gene: 124485193

Following gene: 124485191

Centisome position: 19.08

GC content: 48.7

Gene sequence:

>345_bases
ATGCATGAATCCGGCATTGCCTATGACGTTTATGTGACCTCAAAGCGGGCAGCAGAAGAGAATCACGCAAAACTGGTGAA
GACCATTTATGTGGATGTCGGATCCATGGCGATGGTAAACCCGGAACAGGTGGAGTTCATGTTCCGGACTTTTATCACCG
ACGATCCGATTTTTGCAGAGACAAAACTCGTTTTTAACACCATTCTCCCGATAGCCGAGTGTGCCTGCGGATACAAGGGG
CCTGAGATTTTTGTATGTCCCAACTGCGGGAAACTGCCCCATATGGTCCAGGGAAGAGAGATCGTCGTCAAGAATCTGGA
GATCGAAACAGGTGAATCAGCATGA

Upstream 100 bases:

>100_bases
GTACATGTAGGTTTTGCCATTCAGCGGCTTTCGCGTGAGGAAGGGTTGGAAACGCGGGAACTGTTTAAAGAAGTCTACAA
AGCGATGGAAGAAGCGGACC

Downstream 100 bases:

>100_bases
AAAAAGATACCGAAGTAAATATGATGCACGGAGCCGGCGGGGAGGTCATGGGAGAACTTCTCCAGACACTCACGGCGTTC
AAAAACAATAATGCCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MHESGIAYDVYVTSKRAAEENHAKLVKTIYVDVGSMAMVNPEQVEFMFRTFITDDPIFAETKLVFNTILPIAECACGYKG
PEIFVCPNCGKLPHMVQGREIVVKNLEIETGESA

Sequences:

>Translated_114_residues
MHESGIAYDVYVTSKRAAEENHAKLVKTIYVDVGSMAMVNPEQVEFMFRTFITDDPIFAETKLVFNTILPIAECACGYKG
PEIFVCPNCGKLPHMVQGREIVVKNLEIETGESA
>Mature_114_residues
MHESGIAYDVYVTSKRAAEENHAKLVKTIYVDVGSMAMVNPEQVEFMFRTFITDDPIFAETKLVFNTILPIAECACGYKG
PEIFVCPNCGKLPHMVQGREIVVKNLEIETGESA

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 12688; Mature: 12688

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESGIAYDVYVTSKRAAEENHAKLVKTIYVDVGSMAMVNPEQVEFMFRTFITDDPIFAE
CCCCCEEEEEEEECCCCCCHHHHHHHHHEEEECCCEEEECHHHHHHHHHHHCCCCCCCHH
TKLVFNTILPIAECACGYKGPEIFVCPNCGKLPHMVQGREIVVKNLEIETGESA
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MHESGIAYDVYVTSKRAAEENHAKLVKTIYVDVGSMAMVNPEQVEFMFRTFITDDPIFAE
CCCCCEEEEEEEECCCCCCHHHHHHHHHEEEECCCEEEECHHHHHHHHHHHCCCCCCCHH
TKLVFNTILPIAECACGYKGPEIFVCPNCGKLPHMVQGREIVVKNLEIETGESA
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA