Click here to switch to the map view.

The map label for this gene is hypE [C]

Identifier: 124485191

GI number: 124485191

Start: 343072

End: 344097

Strand: Reverse

Name: hypE [C]

Synonym: Mlab_0364

Alternate gene names: 124485191

Gene position: 344097-343072 (Counterclockwise)

Preceding gene: 124485192

Following gene: 124485190

Centisome position: 19.06

GC content: 53.9

Gene sequence:

>1026_bases
ATGAAAAAAGATACCGAAGTAAATATGATGCACGGAGCCGGCGGGGAGGTCATGGGAGAACTTCTCCAGACACTCACGGC
GTTCAAAAACAATAATGCCGGCGGAATCGGCCTTGAGTCTCTGGATGACGGATCGACATTCACAATCGGGGGAAAGACTA
CCGTTTTAACCACCGACTCGCACGTGGTCAAGCCGATCTTTTTTCCGGGCGGGGACATCGGCAGGGTCGCGGTCTCTGGA
ACAATCAATGATCTTGCCGTGATGGGTGCACGGCCGATCGCCCTGACCTGTGCAATGGTCATTGAAGAAGGATTTCCGAT
CACTGATCTTGAAAAGATCGTTGCTTCGATGGATGAAGCCTTAGGAGAGGTCGGAGCAGCAGTCATCACCGGCGATACGA
AAGTCGTTGAGAAAGGAAGTCTTGACGGAATCGTGATCAATACTGCCGGAGTTGGCGTGATCGAGGAGGAAGGATTTCTG
ATTCGCGACAAAAATCTCTCGGTCGGAGACAAGATCATCGTATCCGGTACGCTCGGAGATCACGGACTTGCCATCGTTTC
GTTTAGAGAAGGGTTCGATCTTGGGGATCAGCTGAAGTCCGACGTTGCCCCGCTCTGGACGATGATCGAAGCAGCGATGA
AGGCGGCCGGTACTAATAATATTCACGCAATGAAGGATCCGACACGTGGAGGATTTGCAGCCTGCATCAACGAGATGGCC
CGCAAAGCCGGCGTAAAGGTCGTCGTCAGCGAAGAAAAAGTTCCCATCAGGGAAAGCGTTGCCTCCGCAGGATCCCTTCT
TGGAATCGACCCGCTGCAGGTCGCAAATGAGGGTAAATGCGTGATGGGCGTTGCTCCCGAAGCAGCGGACCGCGTGCTTG
CCGCCCTGAAAAACCACCCGTACGGGAAAAATGCCGCAATCATCGGCGAAGTGATTGAAGGTTCCGGGGTTGTCATGCAG
ACACGTATCGGCGGCGAACGATTCATCGAACCGCCGCTTGGCGATCCGGTTCCAAGAGTTTGCTGA

Upstream 100 bases:

>100_bases
CTGAGATTTTTGTATGTCCCAACTGCGGGAAACTGCCCCATATGGTCCAGGGAAGAGAGATCGTCGTCAAGAATCTGGAG
ATCGAAACAGGTGAATCAGC

Downstream 100 bases:

>100_bases
AATATGTCTGAACTGGTTCTTTCAAATGCCCGGCTGCCTGACGGAAGGATCGCAGACATCTCCATAGATCAGGGAATCAT
CACCCACATCGGGAGTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKKDTEVNMMHGAGGEVMGELLQTLTAFKNNNAGGIGLESLDDGSTFTIGGKTTVLTTDSHVVKPIFFPGGDIGRVAVSG
TINDLAVMGARPIALTCAMVIEEGFPITDLEKIVASMDEALGEVGAAVITGDTKVVEKGSLDGIVINTAGVGVIEEEGFL
IRDKNLSVGDKIIVSGTLGDHGLAIVSFREGFDLGDQLKSDVAPLWTMIEAAMKAAGTNNIHAMKDPTRGGFAACINEMA
RKAGVKVVVSEEKVPIRESVASAGSLLGIDPLQVANEGKCVMGVAPEAADRVLAALKNHPYGKNAAIIGEVIEGSGVVMQ
TRIGGERFIEPPLGDPVPRVC

Sequences:

>Translated_341_residues
MKKDTEVNMMHGAGGEVMGELLQTLTAFKNNNAGGIGLESLDDGSTFTIGGKTTVLTTDSHVVKPIFFPGGDIGRVAVSG
TINDLAVMGARPIALTCAMVIEEGFPITDLEKIVASMDEALGEVGAAVITGDTKVVEKGSLDGIVINTAGVGVIEEEGFL
IRDKNLSVGDKIIVSGTLGDHGLAIVSFREGFDLGDQLKSDVAPLWTMIEAAMKAAGTNNIHAMKDPTRGGFAACINEMA
RKAGVKVVVSEEKVPIRESVASAGSLLGIDPLQVANEGKCVMGVAPEAADRVLAALKNHPYGKNAAIIGEVIEGSGVVMQ
TRIGGERFIEPPLGDPVPRVC
>Mature_341_residues
MKKDTEVNMMHGAGGEVMGELLQTLTAFKNNNAGGIGLESLDDGSTFTIGGKTTVLTTDSHVVKPIFFPGGDIGRVAVSG
TINDLAVMGARPIALTCAMVIEEGFPITDLEKIVASMDEALGEVGAAVITGDTKVVEKGSLDGIVINTAGVGVIEEEGFL
IRDKNLSVGDKIIVSGTLGDHGLAIVSFREGFDLGDQLKSDVAPLWTMIEAAMKAAGTNNIHAMKDPTRGGFAACINEMA
RKAGVKVVVSEEKVPIRESVASAGSLLGIDPLQVANEGKCVMGVAPEAADRVLAALKNHPYGKNAAIIGEVIEGSGVVMQ
TRIGGERFIEPPLGDPVPRVC

Specific function: Unknown

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=337, Percent_Identity=41.2462908011869, Blast_Score=255, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 35334; Mature: 35334

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDTEVNMMHGAGGEVMGELLQTLTAFKNNNAGGIGLESLDDGSTFTIGGKTTVLTTDS
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEECCC
HVVKPIFFPGGDIGRVAVSGTINDLAVMGARPIALTCAMVIEEGFPITDLEKIVASMDEA
CEEEEEEECCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGEVGAAVITGDTKVVEKGSLDGIVINTAGVGVIEEEGFLIRDKNLSVGDKIIVSGTLGD
HHHHCCEEEECCCCEEECCCCCEEEEECCCCEEEECCCEEEEECCCCCCCEEEEEECCCC
HGLAIVSFREGFDLGDQLKSDVAPLWTMIEAAMKAAGTNNIHAMKDPTRGGFAACINEMA
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHH
RKAGVKVVVSEEKVPIRESVASAGSLLGIDPLQVANEGKCVMGVAPEAADRVLAALKNHP
HHCCCEEEEECCCCCHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHCCC
YGKNAAIIGEVIEGSGVVMQTRIGGERFIEPPLGDPVPRVC
CCCCCEEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MKKDTEVNMMHGAGGEVMGELLQTLTAFKNNNAGGIGLESLDDGSTFTIGGKTTVLTTDS
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEECCC
HVVKPIFFPGGDIGRVAVSGTINDLAVMGARPIALTCAMVIEEGFPITDLEKIVASMDEA
CEEEEEEECCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGEVGAAVITGDTKVVEKGSLDGIVINTAGVGVIEEEGFLIRDKNLSVGDKIIVSGTLGD
HHHHCCEEEECCCCEEECCCCCEEEEECCCCEEEECCCEEEEECCCCCCCEEEEEECCCC
HGLAIVSFREGFDLGDQLKSDVAPLWTMIEAAMKAAGTNNIHAMKDPTRGGFAACINEMA
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHH
RKAGVKVVVSEEKVPIRESVASAGSLLGIDPLQVANEGKCVMGVAPEAADRVLAALKNHP
HHCCCEEEEECCCCCHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHCCC
YGKNAAIIGEVIEGSGVVMQTRIGGERFIEPPLGDPVPRVC
CCCCCEEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]