| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is obg [H]
Identifier: 124485163
GI number: 124485163
Start: 317542
End: 318501
Strand: Reverse
Name: obg [H]
Synonym: Mlab_0336
Alternate gene names: 124485163
Gene position: 318501-317542 (Counterclockwise)
Preceding gene: 124485164
Following gene: 124485162
Centisome position: 17.65
GC content: 51.15
Gene sequence:
>960_bases ATGACAGAAAACCATATCTTCGGGCCGGTCATGTCCCGCAGACTCGGAAGGTCACTTGGGATCGATCTTCTGCCCTTCAA GACCTGTTCATATGACTGTGTCTACTGTGAATGCGGAGCGACCACCCATATCACGACAAAAAGGGCCGAGTTTTTTCCAA CTGAAGAGGTGATCTCCCAGCTGGATGCAGTCCTCAGAGAAAGACCTACTTTGGATTACATAACATTTGCCGGATCCGGT GAACCGACCCTTTCCCTGTCGATCGGAAAAATCATCAGACATCTGAAAACAACCTATCCGCAGTATAAGGTCGCCGTCCT CACGAACGGGAGCCTGCTGGGTAATAAGGAGGTCATTGCGGATTTGTCCAGTGCGGATCTGGTTATCCCTACCCTGACCA GCACATCGCAGGAAACGTTTGAAAAAATCCATCGCCCAGATACCTGCCTCTTAATAAAAACGATCATCAGTGACATACTG GAGTTTCGAAAGGAATTCCATGGTGAGATCTGGCTGGAGATCTTCCTCATACCGGATCTGAACACCAGCTTAGAAGAACT GGCATCACTTCGAGACGTTATAGATAAAATCCAACCTGCACGCATCCAGCTGAACACGCTTGACCGGCCGGCAGCAGAGG ACTGGGTCACGGCCCCGGATCCGGACGAGCTGGAAAATTTCAGGAAATACTTTGCCGAACTCAAGATCCCTGTAGATGTG GCCGGAGTCTGCTGTGAGCAGCCCGATGTCTGCAGAGCCGGAGAAAGCACGCATGAACATATCCTGAAAACCCTCCGCAT CCGGCCTTCGACGGTTGAAGATCTGGCATCCATGACCGGCTTACATCATCATGAGGTGGCAAAGTACCTCTCCGGCCTTC TTGAAGAGGGAACGGTCCATATCCAGAGGGGAAAAAGAGGCGTGTTCTACTCTGCAGGCCCGGATATGACCCGGAAATAA
Upstream 100 bases:
>100_bases CTATCAGCACGACCCTCAAAAAATTCTATTATTATCTTTTAGCACTAAATGAGATACCAATGACGAAAAACGCCCCTTGG CACAGATACGGGGGATTGAA
Downstream 100 bases:
>100_bases TACCGGCCGACGACAAAACGAAACCCCGCATCTCAGTTTTGGGAGTGAACGGCAAAACCGCTGATTCGAAAAAAAACATA AATTCAAATAAAAAGCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: GTP-binding protein obg [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTENHIFGPVMSRRLGRSLGIDLLPFKTCSYDCVYCECGATTHITTKRAEFFPTEEVISQLDAVLRERPTLDYITFAGSG EPTLSLSIGKIIRHLKTTYPQYKVAVLTNGSLLGNKEVIADLSSADLVIPTLTSTSQETFEKIHRPDTCLLIKTIISDIL EFRKEFHGEIWLEIFLIPDLNTSLEELASLRDVIDKIQPARIQLNTLDRPAAEDWVTAPDPDELENFRKYFAELKIPVDV AGVCCEQPDVCRAGESTHEHILKTLRIRPSTVEDLASMTGLHHHEVAKYLSGLLEEGTVHIQRGKRGVFYSAGPDMTRK
Sequences:
>Translated_319_residues MTENHIFGPVMSRRLGRSLGIDLLPFKTCSYDCVYCECGATTHITTKRAEFFPTEEVISQLDAVLRERPTLDYITFAGSG EPTLSLSIGKIIRHLKTTYPQYKVAVLTNGSLLGNKEVIADLSSADLVIPTLTSTSQETFEKIHRPDTCLLIKTIISDIL EFRKEFHGEIWLEIFLIPDLNTSLEELASLRDVIDKIQPARIQLNTLDRPAAEDWVTAPDPDELENFRKYFAELKIPVDV AGVCCEQPDVCRAGESTHEHILKTLRIRPSTVEDLASMTGLHHHEVAKYLSGLLEEGTVHIQRGKRGVFYSAGPDMTRK >Mature_318_residues TENHIFGPVMSRRLGRSLGIDLLPFKTCSYDCVYCECGATTHITTKRAEFFPTEEVISQLDAVLRERPTLDYITFAGSGE PTLSLSIGKIIRHLKTTYPQYKVAVLTNGSLLGNKEVIADLSSADLVIPTLTSTSQETFEKIHRPDTCLLIKTIISDILE FRKEFHGEIWLEIFLIPDLNTSLEELASLRDVIDKIQPARIQLNTLDRPAAEDWVTAPDPDELENFRKYFAELKIPVDVA GVCCEQPDVCRAGESTHEHILKTLRIRPSTVEDLASMTGLHHHEVAKYLSGLLEEGTVHIQRGKRGVFYSAGPDMTRK
Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t
COG id: COG0731
COG function: function code C; Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR014100 - InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR006169 - InterPro: IPR002917 - InterPro: IPR007197 [H]
Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 35810; Mature: 35679
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENHIFGPVMSRRLGRSLGIDLLPFKTCSYDCVYCECGATTHITTKRAEFFPTEEVISQ CCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCEEEECCHHHCCCHHHHHHH LDAVLRERPTLDYITFAGSGEPTLSLSIGKIIRHLKTTYPQYKVAVLTNGSLLGNKEVIA HHHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHH DLSSADLVIPTLTSTSQETFEKIHRPDTCLLIKTIISDILEFRKEFHGEIWLEIFLIPDL CCCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCC NTSLEELASLRDVIDKIQPARIQLNTLDRPAAEDWVTAPDPDELENFRKYFAELKIPVDV CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH AGVCCEQPDVCRAGESTHEHILKTLRIRPSTVEDLASMTGLHHHEVAKYLSGLLEEGTVH HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE IQRGKRGVFYSAGPDMTRK EECCCCCEEEECCCCCCCC >Mature Secondary Structure TENHIFGPVMSRRLGRSLGIDLLPFKTCSYDCVYCECGATTHITTKRAEFFPTEEVISQ CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCEEEECCHHHCCCHHHHHHH LDAVLRERPTLDYITFAGSGEPTLSLSIGKIIRHLKTTYPQYKVAVLTNGSLLGNKEVIA HHHHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHH DLSSADLVIPTLTSTSQETFEKIHRPDTCLLIKTIISDILEFRKEFHGEIWLEIFLIPDL CCCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCC NTSLEELASLRDVIDKIQPARIQLNTLDRPAAEDWVTAPDPDELENFRKYFAELKIPVDV CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH AGVCCEQPDVCRAGESTHEHILKTLRIRPSTVEDLASMTGLHHHEVAKYLSGLLEEGTVH HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE IQRGKRGVFYSAGPDMTRK EECCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA