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The map label for this gene is 124485152

Identifier: 124485152

GI number: 124485152

Start: 307304

End: 307537

Strand: Reverse

Name: 124485152

Synonym: Mlab_0325

Alternate gene names: NA

Gene position: 307537-307304 (Counterclockwise)

Preceding gene: 124485153

Following gene: 124485151

Centisome position: 17.04

GC content: 46.58

Gene sequence:

>234_bases
ATGGTATCCAGCATTGTCCTTCCGATAAAAAAAGTCAACTCACTCGTTGACTCAAAAATTTCCGTGGAAATAAAAGATGA
GGGATGTAAATTCGAGGGACGGCTCGTCGCAATGGACGAGTATCTCAATCTTCACCTCGAAGAAACCGTTGAGATCACCG
CAAACGGTCGAAGAAACATCGGCACCGTCGTCATCCGCGGAAACAACATCCTCACCATCTCTCCGCTGAACTAA

Upstream 100 bases:

>100_bases
ATGACAGAGCCGCGATCACGATATGTCTCCGTATGACAACAGCCCATGTCCAGTCTCAAAAGAACAGATTAATTACGTCA
TATAACTAACACTTAGAGAT

Downstream 100 bases:

>100_bases
ATATGTCCAGAGAAGCTGAACTAAACGAAGCGGACGAAAAAACATTTGCCTATCTCAAGGAGCATCCGAAAGGAGTTCTG
CAGAGCGACCTCTGGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Small Nucleolar RNP Sm Protein

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MVSSIVLPIKKVNSLVDSKISVEIKDEGCKFEGRLVAMDEYLNLHLEETVEITANGRRNIGTVVIRGNNILTISPLN

Sequences:

>Translated_77_residues
MVSSIVLPIKKVNSLVDSKISVEIKDEGCKFEGRLVAMDEYLNLHLEETVEITANGRRNIGTVVIRGNNILTISPLN
>Mature_77_residues
MVSSIVLPIKKVNSLVDSKISVEIKDEGCKFEGRLVAMDEYLNLHLEETVEITANGRRNIGTVVIRGNNILTISPLN

Specific function: Unknown

COG id: COG1958

COG function: function code K; Small nuclear ribonucleoprotein (snRNP) homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8509; Mature: 8509

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSIVLPIKKVNSLVDSKISVEIKDEGCKFEGRLVAMDEYLNLHLEETVEITANGRRNI
CCCCEEECHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCE
GTVVIRGNNILTISPLN
EEEEEECCCEEEEEECC
>Mature Secondary Structure
MVSSIVLPIKKVNSLVDSKISVEIKDEGCKFEGRLVAMDEYLNLHLEETVEITANGRRNI
CCCCEEECHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCE
GTVVIRGNNILTISPLN
EEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA