Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124485151

Identifier: 124485151

GI number: 124485151

Start: 306939

End: 307301

Strand: Reverse

Name: 124485151

Synonym: Mlab_0324

Alternate gene names: NA

Gene position: 307301-306939 (Counterclockwise)

Preceding gene: 124485152

Following gene: 124485150

Centisome position: 17.03

GC content: 51.52

Gene sequence:

>363_bases
ATGTCCAGAGAAGCTGAACTAAACGAAGCGGACGAAAAAACATTTGCCTATCTCAAGGAGCATCCGAAAGGAGTTCTGCA
GAGCGACCTCTGGAAAGCAATCGAGGTGGACAGCCGCACCTGTTCGCGCATCCTCAAAAAACTGGAGGATGCAGGCCTCA
TCGCCCGGGAGGAGACGAAAAAAGACGGAACACGCACCTATCTTATCACCGTCGTCCATACATCCCAGGCAGTCGATCCA
AGCCTTTTGATGGCCGGCGAGTACATCGTTCCATGCGTAGCATGCGATGAAGAGTGTACCGTCGAACACTGTAAGATGCT
CGAAGACTGGATCTATGAGCTGGTCTTCGACGAACTCGAATAA

Upstream 100 bases:

>100_bases
TCGAAGAAACCGTTGAGATCACCGCAAACGGTCGAAGAAACATCGGCACCGTCGTCATCCGCGGAAACAACATCCTCACC
ATCTCTCCGCTGAACTAAAT

Downstream 100 bases:

>100_bases
CCTTCTTTTTTTCTCTGTCAATCAATAACGAAACCTATTTCTCCATAGCCTACAGATTCAGTGTATTATGTCGGCAGGTT
TTTTTGACCGGTTCTCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETKKDGTRTYLITVVHTSQAVDP
SLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE

Sequences:

>Translated_120_residues
MSREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETKKDGTRTYLITVVHTSQAVDP
SLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE
>Mature_119_residues
SREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETKKDGTRTYLITVVHTSQAVDPS
LLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13727; Mature: 13596

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETK
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
KDGTRTYLITVVHTSQAVDPSLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE
CCCCEEEEEEEEECCCCCCHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETK
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
KDGTRTYLITVVHTSQAVDPSLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE
CCCCEEEEEEEEECCCCCCHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA