| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485151
Identifier: 124485151
GI number: 124485151
Start: 306939
End: 307301
Strand: Reverse
Name: 124485151
Synonym: Mlab_0324
Alternate gene names: NA
Gene position: 307301-306939 (Counterclockwise)
Preceding gene: 124485152
Following gene: 124485150
Centisome position: 17.03
GC content: 51.52
Gene sequence:
>363_bases ATGTCCAGAGAAGCTGAACTAAACGAAGCGGACGAAAAAACATTTGCCTATCTCAAGGAGCATCCGAAAGGAGTTCTGCA GAGCGACCTCTGGAAAGCAATCGAGGTGGACAGCCGCACCTGTTCGCGCATCCTCAAAAAACTGGAGGATGCAGGCCTCA TCGCCCGGGAGGAGACGAAAAAAGACGGAACACGCACCTATCTTATCACCGTCGTCCATACATCCCAGGCAGTCGATCCA AGCCTTTTGATGGCCGGCGAGTACATCGTTCCATGCGTAGCATGCGATGAAGAGTGTACCGTCGAACACTGTAAGATGCT CGAAGACTGGATCTATGAGCTGGTCTTCGACGAACTCGAATAA
Upstream 100 bases:
>100_bases TCGAAGAAACCGTTGAGATCACCGCAAACGGTCGAAGAAACATCGGCACCGTCGTCATCCGCGGAAACAACATCCTCACC ATCTCTCCGCTGAACTAAAT
Downstream 100 bases:
>100_bases CCTTCTTTTTTTCTCTGTCAATCAATAACGAAACCTATTTCTCCATAGCCTACAGATTCAGTGTATTATGTCGGCAGGTT TTTTTGACCGGTTCTCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETKKDGTRTYLITVVHTSQAVDP SLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE
Sequences:
>Translated_120_residues MSREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETKKDGTRTYLITVVHTSQAVDP SLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE >Mature_119_residues SREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETKKDGTRTYLITVVHTSQAVDPS LLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE
Specific function: Unknown
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13727; Mature: 13596
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETK CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC KDGTRTYLITVVHTSQAVDPSLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE CCCCEEEEEEEEECCCCCCHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SREAELNEADEKTFAYLKEHPKGVLQSDLWKAIEVDSRTCSRILKKLEDAGLIAREETK CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC KDGTRTYLITVVHTSQAVDPSLLMAGEYIVPCVACDEECTVEHCKMLEDWIYELVFDELE CCCCEEEEEEEEECCCCCCHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA