| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485150
Identifier: 124485150
GI number: 124485150
Start: 305381
End: 306871
Strand: Reverse
Name: 124485150
Synonym: Mlab_0323
Alternate gene names: NA
Gene position: 306871-305381 (Counterclockwise)
Preceding gene: 124485151
Following gene: 124485149
Centisome position: 17.0
GC content: 52.85
Gene sequence:
>1491_bases ATGTCGGCAGGTTTTTTTGACCGGTTCTCTGCAAAGAAACCCTGGATCGTCGAGAGTGTACCGCCGCCCTCGACCGGTCA CGGGGCAGGAATGCAGGTACCCGAATACAAATCGCACCCCTATTTTATCGTCGCATCCGTAGAGATGGGAAACACCACTA CCAAATGTATTCTGACGGGTACAAGCCTTGATGACGGGAAATCCTACATCATCAACAAAACCGTGTCCATGAGCAGAGAC GTCAGAAAACCCAAAAACGGAGAAGAGATTTTCGGAGCTACACTTGACGGGACGGAGCTCACCAGAGAGTCCGTCACCGA ACTTGTCAGAGACACACTGATAAAATGCCATAAAGATGCAGATCTGAGCATCAAAGACGAACTTGATTTCGTTGTGAGAA GCACGGGAGTCGTGGCCGCAATGGACTCACCCGATCAGGTCGGCGAGTTCGTCAAGGCGCTCGCTAACGGATGCCTGCTC GCCGGCGTCCCGCCGAAAAAGATGACGCCCCCGATGGGAATCAACAGCCTCCCAAAAAAACTCCGGGACTTTTCCTACGC CGACCGGCTCGTTTTTACCGGGGCGATCGCCGGCGTAATGCCTCCAATCGGATCCACCGGTGTTGAGATGGTTGCAAACG AGATGGAGGGAGAGCTCGCAATGGCCGGAATCAAGGAAGGCGCCAAATGGACCGGCGTAGACTTCAGGAATCCCTGTATC TCCATGGACTTTGGGACAACGCTTGATGGACGAATCACCAGCGACGTTGATCCAAAAGCTGAAAATCCTTTTGCAAAAAC GATTGGAAACTTCTGCGGCCTCGCCGGCGCAATACCCGATGCAATCATTCGCGGAACCGGCCTCGTCGATAAAAAGAAAG GTACCGCGCTTGACCTGTTCGGAGAAAAATGCAAACCTTCCTCGACCCGTGCGACGAAAAAAGCCCAGCCCTATGTTGAC CGCTGCATGGAAATTATCGACATCACCGAAGTCCCGCGGGACCGGACGCATTTCGGCAAAGTGCCGGTCTGTGCCGACGT TGCCGAGGATTCCGGCATCGTTCTGATAGGTGTCGATATCGGTGTAAACGGAGACCGGACGGCAGATCTTGAAGCGATCG GAGCAGAAATCGCCAAAAACGAAAACAAAGAAGTAATCAAAGAGGTTATCGACAGGGTATGTGCAAACGTCGCGCTCAAA ATCATAGATATCTGCGTCAAGAGAAACTTCCTGCCGAAAAACAGCTCGATAGGATTCACCGGACGTGCGATCATCTCAGG CAATAAACCCCAATATATCCTCGAGGGCGTAATGGAGCGCGGGATCTATGACGATCCGGTCGATCATCTCGTCTTCGTAG ACGACGGACTCGCCCGCGGAGCGGCACTGATGGGCCGTTGTATGAACAGTCTTGGAAATCCAAAGTGCCCGATCGGCGGG GTTCGGGGCGGACATTGTATTATGGCAAAACGCCAAAAGATAGGTAAGTAA
Upstream 100 bases:
>100_bases ATCTATGAGCTGGTCTTCGACGAACTCGAATAACCTTCTTTTTTTCTCTGTCAATCAATAACGAAACCTATTTCTCCATA GCCTACAGATTCAGTGTATT
Downstream 100 bases:
>100_bases TATGGAAGACGAAGAATTTGATTTAGTCATTCCTCCGGGAACGCCGAGAACGATCATCCGCGACGCCGCACTCAAGTTCG ACGTAGAACTCGTGAGTGTC
Product: cobalt transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSAGFFDRFSAKKPWIVESVPPPSTGHGAGMQVPEYKSHPYFIVASVEMGNTTTKCILTGTSLDDGKSYIINKTVSMSRD VRKPKNGEEIFGATLDGTELTRESVTELVRDTLIKCHKDADLSIKDELDFVVRSTGVVAAMDSPDQVGEFVKALANGCLL AGVPPKKMTPPMGINSLPKKLRDFSYADRLVFTGAIAGVMPPIGSTGVEMVANEMEGELAMAGIKEGAKWTGVDFRNPCI SMDFGTTLDGRITSDVDPKAENPFAKTIGNFCGLAGAIPDAIIRGTGLVDKKKGTALDLFGEKCKPSSTRATKKAQPYVD RCMEIIDITEVPRDRTHFGKVPVCADVAEDSGIVLIGVDIGVNGDRTADLEAIGAEIAKNENKEVIKEVIDRVCANVALK IIDICVKRNFLPKNSSIGFTGRAIISGNKPQYILEGVMERGIYDDPVDHLVFVDDGLARGAALMGRCMNSLGNPKCPIGG VRGGHCIMAKRQKIGK
Sequences:
>Translated_496_residues MSAGFFDRFSAKKPWIVESVPPPSTGHGAGMQVPEYKSHPYFIVASVEMGNTTTKCILTGTSLDDGKSYIINKTVSMSRD VRKPKNGEEIFGATLDGTELTRESVTELVRDTLIKCHKDADLSIKDELDFVVRSTGVVAAMDSPDQVGEFVKALANGCLL AGVPPKKMTPPMGINSLPKKLRDFSYADRLVFTGAIAGVMPPIGSTGVEMVANEMEGELAMAGIKEGAKWTGVDFRNPCI SMDFGTTLDGRITSDVDPKAENPFAKTIGNFCGLAGAIPDAIIRGTGLVDKKKGTALDLFGEKCKPSSTRATKKAQPYVD RCMEIIDITEVPRDRTHFGKVPVCADVAEDSGIVLIGVDIGVNGDRTADLEAIGAEIAKNENKEVIKEVIDRVCANVALK IIDICVKRNFLPKNSSIGFTGRAIISGNKPQYILEGVMERGIYDDPVDHLVFVDDGLARGAALMGRCMNSLGNPKCPIGG VRGGHCIMAKRQKIGK >Mature_495_residues SAGFFDRFSAKKPWIVESVPPPSTGHGAGMQVPEYKSHPYFIVASVEMGNTTTKCILTGTSLDDGKSYIINKTVSMSRDV RKPKNGEEIFGATLDGTELTRESVTELVRDTLIKCHKDADLSIKDELDFVVRSTGVVAAMDSPDQVGEFVKALANGCLLA GVPPKKMTPPMGINSLPKKLRDFSYADRLVFTGAIAGVMPPIGSTGVEMVANEMEGELAMAGIKEGAKWTGVDFRNPCIS MDFGTTLDGRITSDVDPKAENPFAKTIGNFCGLAGAIPDAIIRGTGLVDKKKGTALDLFGEKCKPSSTRATKKAQPYVDR CMEIIDITEVPRDRTHFGKVPVCADVAEDSGIVLIGVDIGVNGDRTADLEAIGAEIAKNENKEVIKEVIDRVCANVALKI IDICVKRNFLPKNSSIGFTGRAIISGNKPQYILEGVMERGIYDDPVDHLVFVDDGLARGAALMGRCMNSLGNPKCPIGGV RGGHCIMAKRQKIGK
Specific function: Unknown
COG id: COG4065
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1153 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008303 [H]
Pfam domain/function: PF09887 DUF2114 [H]
EC number: NA
Molecular weight: Translated: 53176; Mature: 53045
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGFFDRFSAKKPWIVESVPPPSTGHGAGMQVPEYKSHPYFIVASVEMGNTTTKCILTG CCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEC TSLDDGKSYIINKTVSMSRDVRKPKNGEEIFGATLDGTELTRESVTELVRDTLIKCHKDA CCCCCCCEEEEECHHHHHHHHCCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCC DLSIKDELDFVVRSTGVVAAMDSPDQVGEFVKALANGCLLAGVPPKKMTPPMGINSLPKK CCEEHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHH LRDFSYADRLVFTGAIAGVMPPIGSTGVEMVANEMEGELAMAGIKEGAKWTGVDFRNPCI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHCCCCEECCCCCCCCEE SMDFGTTLDGRITSDVDPKAENPFAKTIGNFCGLAGAIPDAIIRGTGLVDKKKGTALDLF ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCEECCCCCEEECC GEKCKPSSTRATKKAQPYVDRCMEIIDITEVPRDRTHFGKVPVCADVAEDSGIVLIGVDI CCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCCEEEECCCCCCEEEEEEEE GVNGDRTADLEAIGAEIAKNENKEVIKEVIDRVCANVALKIIDICVKRNFLPKNSSIGFT CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GRAIISGNKPQYILEGVMERGIYDDPVDHLVFVDDGLARGAALMGRCMNSLGNPKCPIGG EEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC VRGGHCIMAKRQKIGK CCCCEEEEEHHHHCCC >Mature Secondary Structure SAGFFDRFSAKKPWIVESVPPPSTGHGAGMQVPEYKSHPYFIVASVEMGNTTTKCILTG CCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEC TSLDDGKSYIINKTVSMSRDVRKPKNGEEIFGATLDGTELTRESVTELVRDTLIKCHKDA CCCCCCCEEEEECHHHHHHHHCCCCCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCC DLSIKDELDFVVRSTGVVAAMDSPDQVGEFVKALANGCLLAGVPPKKMTPPMGINSLPKK CCEEHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHH LRDFSYADRLVFTGAIAGVMPPIGSTGVEMVANEMEGELAMAGIKEGAKWTGVDFRNPCI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHCCCCEECCCCCCCCEE SMDFGTTLDGRITSDVDPKAENPFAKTIGNFCGLAGAIPDAIIRGTGLVDKKKGTALDLF ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCEECCCCCEEECC GEKCKPSSTRATKKAQPYVDRCMEIIDITEVPRDRTHFGKVPVCADVAEDSGIVLIGVDI CCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHCCCCCEEEECCCCCCEEEEEEEE GVNGDRTADLEAIGAEIAKNENKEVIKEVIDRVCANVALKIIDICVKRNFLPKNSSIGFT CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GRAIISGNKPQYILEGVMERGIYDDPVDHLVFVDDGLARGAALMGRCMNSLGNPKCPIGG EEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC VRGGHCIMAKRQKIGK CCCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]