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The map label for this gene is rps3Ae

Identifier: 124485114

GI number: 124485114

Start: 268882

End: 269502

Strand: Reverse

Name: rps3Ae

Synonym: Mlab_0287

Alternate gene names: 124485114

Gene position: 269502-268882 (Counterclockwise)

Preceding gene: 124485115

Following gene: 124485111

Centisome position: 14.93

GC content: 50.89

Gene sequence:

>621_bases
ATGGCAAGAAAAAAGCAGAGTGGCGGACGCAAAGTCGAGGGCTGGAAGGCAAAGAACTGGTATAAAGTTCATGCACCGGA
GTTCCTCGGCAAGCAGTTCATTGGAGAGATCATCTCTTCAAATCCGGAAAACGTTCCGGGCCGTGTATTGACGGTTAGTC
TGGGCGAACTTATCCAGGACTATTCCAAACAGAATGTTCGTGCATCCTTTAAGATCATGAATGTTGCAGGCGATGCAGCA
TACACCCAGTTCAATGGTCACGAGATGACCAAAGAGTTCGTTCGTGCAATGGTAAAGAAACGGGCCTCCCGCGTCGACAG
CACGATCACGGTCACGCCCCTTGGCAGTACCCGCGAACTTCAGGTCACGATCACCGCATTCACTATCAACCACGCAAGAC
TTTCCCAGGTTCAGGAGCTTCGTGCAAAGATGGTGAAGGTCGTTGAAGATTCCGCAAAGGAAGCCGACTTCGAGTCCTTT
GTTTCTGCTATGCTGAAAGGCGAACTTTCCAAGAAGATGTTCGCAGAATGCAAGCCAATCTTCCCGGTCCGCAGAATCGA
GATCATCAAATCCGAGTCGGTCAGCTCTGCAGCAGACCGCGCAGCAGCTCTTATCCGTTAA

Upstream 100 bases:

>100_bases
GACAGTTGATGATTATCTGATGAATCTCTCGGTTGCAGAACGGCTCATCGAGACGATCTGCGAAGAGAATACGTTAAAAA
ATACTACAGGTGAATAAACC

Downstream 100 bases:

>100_bases
ATTCGGATAAACACATTTTTTTACCGATACGCTCTTACTGAATTTTTATCAGCATGCTAACCGTTTTCCAAAAGAGAGGG
ACGGGGCCTGTAAAGGATAA

Product: 30S ribosomal protein S3Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MARKKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNPENVPGRVLTVSLGELIQDYSKQNVRASFKIMNVAGDAA
YTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQVTITAFTINHARLSQVQELRAKMVKVVEDSAKEADFESF
VSAMLKGELSKKMFAECKPIFPVRRIEIIKSESVSSAADRAAALIR

Sequences:

>Translated_206_residues
MARKKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNPENVPGRVLTVSLGELIQDYSKQNVRASFKIMNVAGDAA
YTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQVTITAFTINHARLSQVQELRAKMVKVVEDSAKEADFESF
VSAMLKGELSKKMFAECKPIFPVRRIEIIKSESVSSAADRAAALIR
>Mature_205_residues
ARKKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNPENVPGRVLTVSLGELIQDYSKQNVRASFKIMNVAGDAAY
TQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQVTITAFTINHARLSQVQELRAKMVKVVEDSAKEADFESFV
SAMLKGELSKKMFAECKPIFPVRRIEIIKSESVSSAADRAAALIR

Specific function: Unknown

COG id: COG1890

COG function: function code J; Ribosomal protein S3AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S3Ae family

Homologues:

Organism=Homo sapiens, GI4506723, Length=202, Percent_Identity=23.7623762376238, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17553700, Length=208, Percent_Identity=25.4807692307692, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17864162, Length=202, Percent_Identity=23.2673267326733, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS3A_METLZ (A2SQ57)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001029730.1
- STRING:   A2SQ57
- GeneID:   4795355
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_0287
- eggNOG:   arNOG07959
- HOGENOM:   HBG402643
- OMA:   GHDTTRE
- PhylomeDB:   A2SQ57
- ProtClustDB:   PRK04057
- BioCyc:   MLAB410358:MLAB_0287-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00359
- InterPro:   IPR001593
- PANTHER:   PTHR11830

Pfam domain/function: PF01015 Ribosomal_S3Ae

EC number: NA

Molecular weight: Translated: 22996; Mature: 22865

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS01191 RIBOSOMAL_S3AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNPENVPGRVLTVSLGELIQD
CCCCCCCCCCCCCCEECCCEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHH
YSKQNVRASFKIMNVAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTREL
HHHCCHHHHEEEEEECCCHHHEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEE
QVTITAFTINHARLSQVQELRAKMVKVVEDSAKEADFESFVSAMLKGELSKKMFAECKPI
EEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
FPVRRIEIIKSESVSSAADRAAALIR
CCHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ARKKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNPENVPGRVLTVSLGELIQD
CCCCCCCCCCCCCEECCCEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHH
YSKQNVRASFKIMNVAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTREL
HHHCCHHHHEEEEEECCCHHHEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEE
QVTITAFTINHARLSQVQELRAKMVKVVEDSAKEADFESFVSAMLKGELSKKMFAECKPI
EEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
FPVRRIEIIKSESVSSAADRAAALIR
CCHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA