| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is ywoG [H]
Identifier: 124485111
GI number: 124485111
Start: 266815
End: 267990
Strand: Reverse
Name: ywoG [H]
Synonym: Mlab_0284
Alternate gene names: 124485111
Gene position: 267990-266815 (Counterclockwise)
Preceding gene: 124485114
Following gene: 124485108
Centisome position: 14.85
GC content: 49.49
Gene sequence:
>1176_bases ATGTCAGAAGATACTATACAAAAAAAGTTCATCATCTACTTCTGCATAATCGGCTGCTTCGCGATATTCTCGACAACGAT TTCAAAAAATCCCGTTCTCCCCTTATATGCAGCGTCTCTTGGAGCAAATGATGCCTACCTCGGCCTTATCGCCGCCGTAT CCCCTCTCGCCGGCATTCTCTTCAGTTTTCCCGTAGGCCTGATCTCCGACAGGCTTGGCCGAAGAAAACTCCTTATCGTC TCAGGATGCATATTTCTTATAGCTCCCCTGCTTTATCTTCTGATAACGGACCCGGTATTTCTTATCCCCATCAGATTCTT TCACGGCTTGGCGACGGCGATCCTTGGACCGGTGGTAGGAGCGGCGATCGCAGAAAAATTCGGCAACAGAAAAGGCGTAA TGATGGGGACATACAGTTCTGCCACACTCGTCGGCAGGACGGCAGCTCCGCTGATTGGCGGAACAATTATCACATTATTT GCCTTGGCACCGGGATTCACCGCCTATCATATGGTGTATCTCGCAGCGTTTTGTGCTGCAGTACCGGTGTTTATTCTGAT CCTTTTCTTCCGTGATACGCATGGGAGCGTGCAAAAAGTAACCGTTGCCGATTTTACAAACAGTCTGAAGACATTTCTCT CGAACAAAGGGCTTCGTGCTGCATCCACAGCAGAGATGATAACCTACTTCTGTTTTGGCACGTTTGAAACATTCTTGCCT GTCTATCTGCTCCTGATCGGCGTTCCTGCCTGGCAGACCGGCGTCATTTTTGCCGTGCAGGTGGTGGTCATCGCACTCAC CAAGCCGTTCTTCGGCAGACGTGCAGACACGGGAAATCCACAAAAACAGATCGCAGCGGGTATGCTCATAACAGGTATCT CGCTTGGAATCATGGGTTTAACAATAAACTTCTGGATCCTCCTCGTTCTAAGCAGTATTTTTGGGATCGGGATGTCGCTC TCTACAGTAGCGACCAACGTGTATGCTGCTAACACTGCAGAAAAGAACGAACTCGGCGCATCTCTCGGGGCCCTTTCCTC GATCATGGACATCGGTCATACATCGGGCCCTCTTGTCAGCGGGATCGTAATAACGCTTGCAGGATACCAGATTGGTTTTG GTCTTTGCCTTGCCCTGTCGGTACTGACGTCAGTATTTGTGCTGATAACCAGATAA
Upstream 100 bases:
>100_bases CCGCCTGCTGAACACATAATGCATTTTTTGGGCGGGAAAGATATTATGCGTGTCGGTGGATAGCCAAACCTATATAACAT GCCGATAAATATCAACACAA
Downstream 100 bases:
>100_bases AAAAAAGAAAAGAGAGGGGATTAGCTGTGGTAGTGACTCAGCGGTTCGACGGTGATCGTGTTGGTCTTCATCGACTCGAT TGCCTGCACGGCCGCCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSEDTIQKKFIIYFCIIGCFAIFSTTISKNPVLPLYAASLGANDAYLGLIAAVSPLAGILFSFPVGLISDRLGRRKLLIV SGCIFLIAPLLYLLITDPVFLIPIRFFHGLATAILGPVVGAAIAEKFGNRKGVMMGTYSSATLVGRTAAPLIGGTIITLF ALAPGFTAYHMVYLAAFCAAVPVFILILFFRDTHGSVQKVTVADFTNSLKTFLSNKGLRAASTAEMITYFCFGTFETFLP VYLLLIGVPAWQTGVIFAVQVVVIALTKPFFGRRADTGNPQKQIAAGMLITGISLGIMGLTINFWILLVLSSIFGIGMSL STVATNVYAANTAEKNELGASLGALSSIMDIGHTSGPLVSGIVITLAGYQIGFGLCLALSVLTSVFVLITR
Sequences:
>Translated_391_residues MSEDTIQKKFIIYFCIIGCFAIFSTTISKNPVLPLYAASLGANDAYLGLIAAVSPLAGILFSFPVGLISDRLGRRKLLIV SGCIFLIAPLLYLLITDPVFLIPIRFFHGLATAILGPVVGAAIAEKFGNRKGVMMGTYSSATLVGRTAAPLIGGTIITLF ALAPGFTAYHMVYLAAFCAAVPVFILILFFRDTHGSVQKVTVADFTNSLKTFLSNKGLRAASTAEMITYFCFGTFETFLP VYLLLIGVPAWQTGVIFAVQVVVIALTKPFFGRRADTGNPQKQIAAGMLITGISLGIMGLTINFWILLVLSSIFGIGMSL STVATNVYAANTAEKNELGASLGALSSIMDIGHTSGPLVSGIVITLAGYQIGFGLCLALSVLTSVFVLITR >Mature_390_residues SEDTIQKKFIIYFCIIGCFAIFSTTISKNPVLPLYAASLGANDAYLGLIAAVSPLAGILFSFPVGLISDRLGRRKLLIVS GCIFLIAPLLYLLITDPVFLIPIRFFHGLATAILGPVVGAAIAEKFGNRKGVMMGTYSSATLVGRTAAPLIGGTIITLFA LAPGFTAYHMVYLAAFCAAVPVFILILFFRDTHGSVQKVTVADFTNSLKTFLSNKGLRAASTAEMITYFCFGTFETFLPV YLLLIGVPAWQTGVIFAVQVVVIALTKPFFGRRADTGNPQKQIAAGMLITGISLGIMGLTINFWILLVLSSIFGIGMSLS TVATNVYAANTAEKNELGASLGALSSIMDIGHTSGPLVSGIVITLAGYQIGFGLCLALSVLTSVFVLITR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41429; Mature: 41298
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDTIQKKFIIYFCIIGCFAIFSTTISKNPVLPLYAASLGANDAYLGLIAAVSPLAGIL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH FSFPVGLISDRLGRRKLLIVSGCIFLIAPLLYLLITDPVFLIPIRFFHGLATAILGPVVG HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AAIAEKFGNRKGVMMGTYSSATLVGRTAAPLIGGTIITLFALAPGFTAYHMVYLAAFCAA HHHHHHHCCCCCEEEECCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VPVFILILFFRDTHGSVQKVTVADFTNSLKTFLSNKGLRAASTAEMITYFCFGTFETFLP HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VYLLLIGVPAWQTGVIFAVQVVVIALTKPFFGRRADTGNPQKQIAAGMLITGISLGIMGL HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TINFWILLVLSSIFGIGMSLSTVATNVYAANTAEKNELGASLGALSSIMDIGHTSGPLVS HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH GIVITLAGYQIGFGLCLALSVLTSVFVLITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEDTIQKKFIIYFCIIGCFAIFSTTISKNPVLPLYAASLGANDAYLGLIAAVSPLAGIL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH FSFPVGLISDRLGRRKLLIVSGCIFLIAPLLYLLITDPVFLIPIRFFHGLATAILGPVVG HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AAIAEKFGNRKGVMMGTYSSATLVGRTAAPLIGGTIITLFALAPGFTAYHMVYLAAFCAA HHHHHHHCCCCCEEEECCCCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VPVFILILFFRDTHGSVQKVTVADFTNSLKTFLSNKGLRAASTAEMITYFCFGTFETFLP HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VYLLLIGVPAWQTGVIFAVQVVVIALTKPFFGRRADTGNPQKQIAAGMLITGISLGIMGL HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TINFWILLVLSSIFGIGMSLSTVATNVYAANTAEKNELGASLGALSSIMDIGHTSGPLVS HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH GIVITLAGYQIGFGLCLALSVLTSVFVLITR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]