Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485049

Identifier: 124485049

GI number: 124485049

Start: 209957

End: 210241

Strand: Reverse

Name: 124485049

Synonym: Mlab_0222

Alternate gene names: NA

Gene position: 210241-209957 (Counterclockwise)

Preceding gene: 124485050

Following gene: 124485048

Centisome position: 11.65

GC content: 47.72

Gene sequence:

>285_bases
ATGGGCTGTCTTGAAAATATGAACTACGAGATTCTGGCAAAGAACTGCAGTTTCAAAGAAGCACGGGAGATCATCAGAAA
AAATAGTACGGAAAAATACGAAGTCCCTCCCGGATTCAAACTGCTCGAAAAAGCTCTCATCGGGATACCGCCGCTTATCG
TCGGCGTTGCCAATGAAAAACTCGTTTATGCCTACACGAAACCCTGTCACGGCACGTTTGTCGTCGTCGTCGAGGATCCT
GAGGGCGTCGATCATGTTCGCCGAAACGGAAAACCCGTCTTTTAA

Upstream 100 bases:

>100_bases
ATGATCTCGCTGAAGAGATCGAATATCCAACAGAAAAAGTCGTGGCTCCGGTGACGCACAACACCCGGCCCCTTCTCATA
AAATTAGATGAGGTACTCGA

Downstream 100 bases:

>100_bases
TGACCGATCTTCTCCTCTCATCACTGGTCATCGCGGTCGGCCTCGCGATGGATTCGTTCTCCGTATCGCTCGCCGGCGGT
GCAGCGCTCAAAGATAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MGCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEKLVYAYTKPCHGTFVVVVEDP
EGVDHVRRNGKPVF

Sequences:

>Translated_94_residues
MGCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEKLVYAYTKPCHGTFVVVVEDP
EGVDHVRRNGKPVF
>Mature_93_residues
GCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEKLVYAYTKPCHGTFVVVVEDPE
GVDHVRRNGKPVF

Specific function: Unknown

COG id: COG4033

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012031
- ProDom:   PD028584 [H]

Pfam domain/function: PF08979 DUF1894 [H]

EC number: NA

Molecular weight: Translated: 10563; Mature: 10432

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEK
CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEEEECCCE
LVYAYTKPCHGTFVVVVEDPEGVDHVRRNGKPVF
EEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure 
GCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEK
CCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEEEECCCE
LVYAYTKPCHGTFVVVVEDPEGVDHVRRNGKPVF
EEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]