| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485049
Identifier: 124485049
GI number: 124485049
Start: 209957
End: 210241
Strand: Reverse
Name: 124485049
Synonym: Mlab_0222
Alternate gene names: NA
Gene position: 210241-209957 (Counterclockwise)
Preceding gene: 124485050
Following gene: 124485048
Centisome position: 11.65
GC content: 47.72
Gene sequence:
>285_bases ATGGGCTGTCTTGAAAATATGAACTACGAGATTCTGGCAAAGAACTGCAGTTTCAAAGAAGCACGGGAGATCATCAGAAA AAATAGTACGGAAAAATACGAAGTCCCTCCCGGATTCAAACTGCTCGAAAAAGCTCTCATCGGGATACCGCCGCTTATCG TCGGCGTTGCCAATGAAAAACTCGTTTATGCCTACACGAAACCCTGTCACGGCACGTTTGTCGTCGTCGTCGAGGATCCT GAGGGCGTCGATCATGTTCGCCGAAACGGAAAACCCGTCTTTTAA
Upstream 100 bases:
>100_bases ATGATCTCGCTGAAGAGATCGAATATCCAACAGAAAAAGTCGTGGCTCCGGTGACGCACAACACCCGGCCCCTTCTCATA AAATTAGATGAGGTACTCGA
Downstream 100 bases:
>100_bases TGACCGATCTTCTCCTCTCATCACTGGTCATCGCGGTCGGCCTCGCGATGGATTCGTTCTCCGTATCGCTCGCCGGCGGT GCAGCGCTCAAAGATAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MGCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEKLVYAYTKPCHGTFVVVVEDP EGVDHVRRNGKPVF
Sequences:
>Translated_94_residues MGCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEKLVYAYTKPCHGTFVVVVEDP EGVDHVRRNGKPVF >Mature_93_residues GCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEKLVYAYTKPCHGTFVVVVEDPE GVDHVRRNGKPVF
Specific function: Unknown
COG id: COG4033
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012031 - ProDom: PD028584 [H]
Pfam domain/function: PF08979 DUF1894 [H]
EC number: NA
Molecular weight: Translated: 10563; Mature: 10432
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEK CCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEEEECCCE LVYAYTKPCHGTFVVVVEDPEGVDHVRRNGKPVF EEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCC >Mature Secondary Structure GCLENMNYEILAKNCSFKEAREIIRKNSTEKYEVPPGFKLLEKALIGIPPLIVGVANEK CCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEEEECCCE LVYAYTKPCHGTFVVVVEDPEGVDHVRRNGKPVF EEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]