| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is yebN [C]
Identifier: 124485048
GI number: 124485048
Start: 209400
End: 209957
Strand: Reverse
Name: yebN [C]
Synonym: Mlab_0221
Alternate gene names: 124485048
Gene position: 209957-209400 (Counterclockwise)
Preceding gene: 124485049
Following gene: 124485046
Centisome position: 11.63
GC content: 50.36
Gene sequence:
>558_bases ATGACCGATCTTCTCCTCTCATCACTGGTCATCGCGGTCGGCCTCGCGATGGATTCGTTCTCCGTATCGCTCGCCGGCGG TGCAGCGCTCAAAGATAATATCGTAAAAACAGCGGTGACTGCCGGAATATTTTTCGGATTTTTCCAGTTTGCCATGCCGC TCTTAGGATGGGGGATCGGGGTCCCCATCACGCAGGTGATCGATCCGTTCGGCTACTGGATCGTAGTAGGTCTGTTCTTT TTTATCGGCGGAAAAATGATCTGGGACAGTTTTTCCGGAGATGAAGAGGGAATCAGTCTGATTGGATGGAAAGTGCTGCT GCTTTTAGCCGTTGCAACGAGCATAGATGCCCTCGCCGTTGGAATAAGTTTTGCTTTGATCGGCGAGGCAGTCCTTCTCC CGGCAGTGATCATCGGCGTGGTCGCCTTTCTGTTCTCATTTTTTGGGGTCCTCGCGGGTCACAAACTCAGCAGTATCCTT GGAAACAAAATGCAGATTCTGGGAGGAGTTATCCTCGTTCTGATCGGCATCAAATTTTTAATCGAATACTGTCTGTGA
Upstream 100 bases:
>100_bases TTTATGCCTACACGAAACCCTGTCACGGCACGTTTGTCGTCGTCGTCGAGGATCCTGAGGGCGTCGATCATGTTCGCCGA AACGGAAAACCCGTCTTTTA
Downstream 100 bases:
>100_bases ATCAGGCAAGACCCAAAAGATTGGCGATACGTTCGGCTGATGCCTGGATCCGAGCCCCGGCGCCGTCAAAATCGATCGAG TCGAGTGCTGCCTCATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTDLLLSSLVIAVGLAMDSFSVSLAGGAALKDNIVKTAVTAGIFFGFFQFAMPLLGWGIGVPITQVIDPFGYWIVVGLFF FIGGKMIWDSFSGDEEGISLIGWKVLLLLAVATSIDALAVGISFALIGEAVLLPAVIIGVVAFLFSFFGVLAGHKLSSIL GNKMQILGGVILVLIGIKFLIEYCL
Sequences:
>Translated_185_residues MTDLLLSSLVIAVGLAMDSFSVSLAGGAALKDNIVKTAVTAGIFFGFFQFAMPLLGWGIGVPITQVIDPFGYWIVVGLFF FIGGKMIWDSFSGDEEGISLIGWKVLLLLAVATSIDALAVGISFALIGEAVLLPAVIIGVVAFLFSFFGVLAGHKLSSIL GNKMQILGGVILVLIGIKFLIEYCL >Mature_184_residues TDLLLSSLVIAVGLAMDSFSVSLAGGAALKDNIVKTAVTAGIFFGFFQFAMPLLGWGIGVPITQVIDPFGYWIVVGLFFF IGGKMIWDSFSGDEEGISLIGWKVLLLLAVATSIDALAVGISFALIGEAVLLPAVIIGVVAFLFSFFGVLAGHKLSSILG NKMQILGGVILVLIGIKFLIEYCL
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family
Homologues:
Organism=Escherichia coli, GI87081981, Length=181, Percent_Identity=34.2541436464088, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y221_METLZ (A2SPZ1)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001029664.1 - STRING: A2SPZ1 - GeneID: 4795668 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_0221 - eggNOG: arNOG11353 - HOGENOM: HBG709685 - OMA: WDHWVAF - PhylomeDB: A2SPZ1 - BioCyc: MLAB410358:MLAB_0221-MONOMER - HAMAP: MF_01521 - InterPro: IPR003810 - InterPro: IPR022929
Pfam domain/function: PF02659 DUF204
EC number: NA
Molecular weight: Translated: 19465; Mature: 19334
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18b3e118)-; HASH(0x2333a810)-; HASH(0x21faef04)-; HASH(0x23f7ddac)-; HASH(0x233cbf64)-; HASH(0x239f4c04)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLLLSSLVIAVGLAMDSFSVSLAGGAALKDNIVKTAVTAGIFFGFFQFAMPLLGWGIG CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPITQVIDPFGYWIVVGLFFFIGGKMIWDSFSGDEEGISLIGWKVLLLLAVATSIDALAV CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GISFALIGEAVLLPAVIIGVVAFLFSFFGVLAGHKLSSILGNKMQILGGVILVLIGIKFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEYCL HHHHH >Mature Secondary Structure TDLLLSSLVIAVGLAMDSFSVSLAGGAALKDNIVKTAVTAGIFFGFFQFAMPLLGWGIG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VPITQVIDPFGYWIVVGLFFFIGGKMIWDSFSGDEEGISLIGWKVLLLLAVATSIDALAV CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GISFALIGEAVLLPAVIIGVVAFLFSFFGVLAGHKLSSILGNKMQILGGVILVLIGIKFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEYCL HHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA