Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 124485020

GI number: 124485020

Start: 180941

End: 182182

Strand: Reverse

Name: ybjZ [C]

Synonym: Mlab_0193

Alternate gene names: 124485020

Gene position: 182182-180941 (Counterclockwise)

Preceding gene: 124485021

Following gene: 124485013

Centisome position: 10.09

GC content: 51.29

Gene sequence:

>1242_bases
ATGAGTGAAGAAAACACATCGCTCTGGCAGAAAATCTACTCGCCGATGATCCTCTCCCTTGCGGTCAGAAACCTGAAACT
GAACAAATTCAGAACCATCCTTTCGATGATCGGTATCGTGATCGGCGTTTTCGCCATCTGCGGTATGGGAATGATCAGCG
CAGGGTTCACCGAAGAGATGAACTCAATGATCTCCGACACTGCAGACACGCTGACGATCACCCCGATCGGCGAGAAAGTC
ATCGATGGAACGACAACGACGGGCTTCTCCACCAAGGATCTTCGAGACATAGAGTCTGCGGTAAAATCGGTCACCAAAGA
ATACGAATTCATTCCTATGTACTCATCGAGTAAGTACATATATATCGGAAAGGAGACCACCATGGCCACGATATCCGGAA
TGGATTCAAGCGACATCACAAAGCTTGCAACGCTGATCCAGGGAACCCTTCCGCGCGGAGCAACCAACGTTATCGTCGGC
GAGACGTTTGCCGAAGACAATAATCTCAGGCTTGGAAGCCGGATGATCATGCTCGATTCGAGCGGTCAGGAAGTTACCTG
CAGAGTTGTCGGTATCATGGAGGATACCGGACAGCTGACGTTCGGGTTCTCCACGAACAATGCGGTCGTCGGTTCGATCG
AGTGGTATACCTCGCTCGTCGGAGACAATCACGGCCTGTACGACAAGGTCATCGTCAAAGCATACGATCCAACGGAACTG
AACGCGATCGATGCCGCCATCGAGAAGAAGATGAACGGCAAGGAGGACAAAGACTCGGATGATACGGTCTACATCCTGAA
CTCGTATGAGATCATGGCAGTCTTTGACGACATCATGTCCATGTCCAGTATCTTCACGACGATCATCAGCGGGATTTCGC
TTCTGGTCGCTGCTGTCGCAATTGTCAATGTGATGTTGATGAGTGTGAAGGAACGGACACGCGAGGTCGGTATTCTCAGA
AGTATTGGAACCTACCGGAGCCAGATCCTGCAGATGTTTTTGTATGAAGCAGGACTCATCGGTCTGATCGGGGCAATCGT
TGGAACCGTGCTCGCACTGATCGCAGCACCGATTATGCTGATGGCGATGATCGGATCACTGGATGCGATGCTGACAGCGT
CCGTTCTTGTCTATGTGCCGATCGGCATTCTCATCGGTTTGATCGTCTGCCTGATTTCCGGTCTTTACCCGGCTTGGAAA
GCAGCCAATCTCAATCCGGTCGAAGCAATGGCGACCGACTGA

Upstream 100 bases:

>100_bases
CTGCATTCCCAGGGAAGAACGGTTGTCATGGTCACGCATGATCCGAAAACGGCAGAGTATGCCGAACGTATCGTGATCAT
CAAGGATGGTGAGATCGTCG

Downstream 100 bases:

>100_bases
TCTTTTCTTTTTTTAACGAACTACAGGGTAAACGCCTGCAAAAAAGTATCGGCTTTTCAGAGCCGGTCGCCGACTTTCAG
GTAATGCCCGTTCACGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSEENTSLWQKIYSPMILSLAVRNLKLNKFRTILSMIGIVIGVFAICGMGMISAGFTEEMNSMISDTADTLTITPIGEKV
IDGTTTTGFSTKDLRDIESAVKSVTKEYEFIPMYSSSKYIYIGKETTMATISGMDSSDITKLATLIQGTLPRGATNVIVG
ETFAEDNNLRLGSRMIMLDSSGQEVTCRVVGIMEDTGQLTFGFSTNNAVVGSIEWYTSLVGDNHGLYDKVIVKAYDPTEL
NAIDAAIEKKMNGKEDKDSDDTVYILNSYEIMAVFDDIMSMSSIFTTIISGISLLVAAVAIVNVMLMSVKERTREVGILR
SIGTYRSQILQMFLYEAGLIGLIGAIVGTVLALIAAPIMLMAMIGSLDAMLTASVLVYVPIGILIGLIVCLISGLYPAWK
AANLNPVEAMATD

Sequences:

>Translated_413_residues
MSEENTSLWQKIYSPMILSLAVRNLKLNKFRTILSMIGIVIGVFAICGMGMISAGFTEEMNSMISDTADTLTITPIGEKV
IDGTTTTGFSTKDLRDIESAVKSVTKEYEFIPMYSSSKYIYIGKETTMATISGMDSSDITKLATLIQGTLPRGATNVIVG
ETFAEDNNLRLGSRMIMLDSSGQEVTCRVVGIMEDTGQLTFGFSTNNAVVGSIEWYTSLVGDNHGLYDKVIVKAYDPTEL
NAIDAAIEKKMNGKEDKDSDDTVYILNSYEIMAVFDDIMSMSSIFTTIISGISLLVAAVAIVNVMLMSVKERTREVGILR
SIGTYRSQILQMFLYEAGLIGLIGAIVGTVLALIAAPIMLMAMIGSLDAMLTASVLVYVPIGILIGLIVCLISGLYPAWK
AANLNPVEAMATD
>Mature_412_residues
SEENTSLWQKIYSPMILSLAVRNLKLNKFRTILSMIGIVIGVFAICGMGMISAGFTEEMNSMISDTADTLTITPIGEKVI
DGTTTTGFSTKDLRDIESAVKSVTKEYEFIPMYSSSKYIYIGKETTMATISGMDSSDITKLATLIQGTLPRGATNVIVGE
TFAEDNNLRLGSRMIMLDSSGQEVTCRVVGIMEDTGQLTFGFSTNNAVVGSIEWYTSLVGDNHGLYDKVIVKAYDPTELN
AIDAAIEKKMNGKEDKDSDDTVYILNSYEIMAVFDDIMSMSSIFTTIISGISLLVAAVAIVNVMLMSVKERTREVGILRS
IGTYRSQILQMFLYEAGLIGLIGAIVGTVLALIAAPIMLMAMIGSLDAMLTASVLVYVPIGILIGLIVCLISGLYPAWKA
ANLNPVEAMATD

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=448, Percent_Identity=24.1071428571429, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44638; Mature: 44507

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEENTSLWQKIYSPMILSLAVRNLKLNKFRTILSMIGIVIGVFAICGMGMISAGFTEEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
NSMISDTADTLTITPIGEKVIDGTTTTGFSTKDLRDIESAVKSVTKEYEFIPMYSSSKYI
HHHHHCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCEEE
YIGKETTMATISGMDSSDITKLATLIQGTLPRGATNVIVGETFAEDNNLRLGSRMIMLDS
EEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECEECCCCCEEECCEEEEEEC
SGQEVTCRVVGIMEDTGQLTFGFSTNNAVVGSIEWYTSLVGDNHGLYDKVIVKAYDPTEL
CCCEEEEEEEEEEECCCCEEEEECCCCEEEECHHHHHHHHCCCCCCHHHEEEEECCCCHH
NAIDAAIEKKMNGKEDKDSDDTVYILNSYEIMAVFDDIMSMSSIFTTIISGISLLVAAVA
HHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNVMLMSVKERTREVGILRSIGTYRSQILQMFLYEAGLIGLIGAIVGTVLALIAAPIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAMIGSLDAMLTASVLVYVPIGILIGLIVCLISGLYPAWKAANLNPVEAMATD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHCCCC
>Mature Secondary Structure 
SEENTSLWQKIYSPMILSLAVRNLKLNKFRTILSMIGIVIGVFAICGMGMISAGFTEEM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
NSMISDTADTLTITPIGEKVIDGTTTTGFSTKDLRDIESAVKSVTKEYEFIPMYSSSKYI
HHHHHCCCCEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCEEE
YIGKETTMATISGMDSSDITKLATLIQGTLPRGATNVIVGETFAEDNNLRLGSRMIMLDS
EEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECEECCCCCEEECCEEEEEEC
SGQEVTCRVVGIMEDTGQLTFGFSTNNAVVGSIEWYTSLVGDNHGLYDKVIVKAYDPTEL
CCCEEEEEEEEEEECCCCEEEEECCCCEEEECHHHHHHHHCCCCCCHHHEEEEECCCCHH
NAIDAAIEKKMNGKEDKDSDDTVYILNSYEIMAVFDDIMSMSSIFTTIISGISLLVAAVA
HHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVNVMLMSVKERTREVGILRSIGTYRSQILQMFLYEAGLIGLIGAIVGTVLALIAAPIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAMIGSLDAMLTASVLVYVPIGILIGLIVCLISGLYPAWKAANLNPVEAMATD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]