Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485011

Identifier: 124485011

GI number: 124485011

Start: 170890

End: 171486

Strand: Reverse

Name: 124485011

Synonym: Mlab_0184

Alternate gene names: NA

Gene position: 171486-170890 (Counterclockwise)

Preceding gene: 124485012

Following gene: 124485009

Centisome position: 9.5

GC content: 51.93

Gene sequence:

>597_bases
ATGGATATGAAAAATGCAGTTAAATACCTGCTTTTCGATCAAAAGCAGTTCTTCGAAAAGGCTCCCAAAGGTCTTCTGAT
CCCGGCGCTGATCACGCTTCTCTATTCCCTGATATCAATCGCCTTCATCATCCCCGGAGATGTCATGACAGCGGTCATTA
CCGTGATCGGAGGAGTGATCGGCGTCTTCCTCTCATGGGCAGTTGTCGCCGGACTGTTTCTTGCCGGCGTAAAACTCCTC
GGTTATGCGAAATGCACCTTCAAGCAGATGCTTGCAGTGACCGGCTACGCTTCGGCGATCCTCGCGATCGGGGCTCTCTT
AAGCGGACTTGTCGGACTCGTTGGAACGGTTGACCCCCTTGTGAGTCTTGCCGTTCAGGGAGCGGTCCTCTTCTGGTCAA
TCCCGGTCTGGATTTTTGGTATCGCATCCATCACCGAACTCCCGCCGAAAAAGGTCTTCACCTGCATCCTCATCCCGATC
ATTCTGATGATAGCAATGACTGTCGTCTCGTATATCCTCACGGCCTCGCTTACCGAGAGCGCTGCACTCTACGCAGGTTC
AGGTTCAGGATCAGGCTCAGAATTTAGAATGAGATAA

Upstream 100 bases:

>100_bases
ATCGACCGTGGAGAGATCGTCGATGCAAAAACGATCGCACTCCTGACAAGGTCGCTGGCGAAGCTTAATAGTGACTGAAT
AGAAATATTATCCGACATCT

Downstream 100 bases:

>100_bases
TCTTCTCTCATCTTTTCTTTTTTTACAGCATATCTTTGAGATGCTTTTCCTCGCCCGTCTCTGTCAGGATCTCCTGAGCG
ACCGGATCGAGAGCCAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVIGVFLSWAVVAGLFLAGVKLL
GYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPLVSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPI
ILMIAMTVVSYILTASLTESAALYAGSGSGSGSEFRMR

Sequences:

>Translated_198_residues
MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVIGVFLSWAVVAGLFLAGVKLL
GYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPLVSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPI
ILMIAMTVVSYILTASLTESAALYAGSGSGSGSEFRMR
>Mature_198_residues
MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVIGVFLSWAVVAGLFLAGVKLL
GYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPLVSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPI
ILMIAMTVVSYILTASLTESAALYAGSGSGSGSEFRMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20868; Mature: 20868

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVI
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GVFLSWAVVAGLFLAGVKLLGYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPIILMIAMTVVSYILTASLTES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALYAGSGSGSGSEFRMR
HHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVI
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GVFLSWAVVAGLFLAGVKLLGYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPIILMIAMTVVSYILTASLTES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALYAGSGSGSGSEFRMR
HHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA