| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485011
Identifier: 124485011
GI number: 124485011
Start: 170890
End: 171486
Strand: Reverse
Name: 124485011
Synonym: Mlab_0184
Alternate gene names: NA
Gene position: 171486-170890 (Counterclockwise)
Preceding gene: 124485012
Following gene: 124485009
Centisome position: 9.5
GC content: 51.93
Gene sequence:
>597_bases ATGGATATGAAAAATGCAGTTAAATACCTGCTTTTCGATCAAAAGCAGTTCTTCGAAAAGGCTCCCAAAGGTCTTCTGAT CCCGGCGCTGATCACGCTTCTCTATTCCCTGATATCAATCGCCTTCATCATCCCCGGAGATGTCATGACAGCGGTCATTA CCGTGATCGGAGGAGTGATCGGCGTCTTCCTCTCATGGGCAGTTGTCGCCGGACTGTTTCTTGCCGGCGTAAAACTCCTC GGTTATGCGAAATGCACCTTCAAGCAGATGCTTGCAGTGACCGGCTACGCTTCGGCGATCCTCGCGATCGGGGCTCTCTT AAGCGGACTTGTCGGACTCGTTGGAACGGTTGACCCCCTTGTGAGTCTTGCCGTTCAGGGAGCGGTCCTCTTCTGGTCAA TCCCGGTCTGGATTTTTGGTATCGCATCCATCACCGAACTCCCGCCGAAAAAGGTCTTCACCTGCATCCTCATCCCGATC ATTCTGATGATAGCAATGACTGTCGTCTCGTATATCCTCACGGCCTCGCTTACCGAGAGCGCTGCACTCTACGCAGGTTC AGGTTCAGGATCAGGCTCAGAATTTAGAATGAGATAA
Upstream 100 bases:
>100_bases ATCGACCGTGGAGAGATCGTCGATGCAAAAACGATCGCACTCCTGACAAGGTCGCTGGCGAAGCTTAATAGTGACTGAAT AGAAATATTATCCGACATCT
Downstream 100 bases:
>100_bases TCTTCTCTCATCTTTTCTTTTTTTACAGCATATCTTTGAGATGCTTTTCCTCGCCCGTCTCTGTCAGGATCTCCTGAGCG ACCGGATCGAGAGCCAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVIGVFLSWAVVAGLFLAGVKLL GYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPLVSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPI ILMIAMTVVSYILTASLTESAALYAGSGSGSGSEFRMR
Sequences:
>Translated_198_residues MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVIGVFLSWAVVAGLFLAGVKLL GYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPLVSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPI ILMIAMTVVSYILTASLTESAALYAGSGSGSGSEFRMR >Mature_198_residues MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVIGVFLSWAVVAGLFLAGVKLL GYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPLVSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPI ILMIAMTVVSYILTASLTESAALYAGSGSGSGSEFRMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20868; Mature: 20868
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVI CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GVFLSWAVVAGLFLAGVKLLGYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPIILMIAMTVVSYILTASLTES HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALYAGSGSGSGSEFRMR HHEECCCCCCCCCCCCCC >Mature Secondary Structure MDMKNAVKYLLFDQKQFFEKAPKGLLIPALITLLYSLISIAFIIPGDVMTAVITVIGGVI CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GVFLSWAVVAGLFLAGVKLLGYAKCTFKQMLAVTGYASAILAIGALLSGLVGLVGTVDPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLAVQGAVLFWSIPVWIFGIASITELPPKKVFTCILIPIILMIAMTVVSYILTASLTES HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALYAGSGSGSGSEFRMR HHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA