Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485007

Identifier: 124485007

GI number: 124485007

Start: 165869

End: 167218

Strand: Reverse

Name: 124485007

Synonym: Mlab_0180

Alternate gene names: NA

Gene position: 167218-165869 (Counterclockwise)

Preceding gene: 124485009

Following gene: 124485005

Centisome position: 9.26

GC content: 49.19

Gene sequence:

>1350_bases
ATGAAAATTATCTGCCATGCTCCCAGAGAGGATATAATACAGAAAAACAAAACCTATCATTATATTCCCATGAAAAAAAT
CATCATCCCCTTACTCCTTGCAGTAATCATCATACTCATCTCCTGTACGGGATACTATTTCTTTTTCCTCAGCACAAACC
CCCACATAACCCCCGACGACACCTATACCGGAAACCTCACCGCAGAATACACCTTCCCCTTCAAAGACGGCATAGTGAAC
CTCTCCGTCTCCGTGCCGGCATCCGTCTATTACGGAGCACAGAACACAGAATCCAAATACCTTCCCTACACCAAAGCCGG
CGATCTCTCATTCTATGCAGATCTCACCAACGATCCCCTGCAGGAAGAGATGTACACCCAGATCCTCGATCAGACCGAAA
CCGTCAGACAATCATGGGATCTCACGGACGACGAATACATCGAACTGCTTGCAACCTTCGTCCAGAGCATCAATTACAGT
TCGGAAAGTGACTTCCGCTATCCGATCGAGACCGTTATCGGAGAATTCGGCGACTGCGACGACAAAAGCACGCTTCTCGC
GGGGCTCCTCACGCGTTCCGGATATAATGCCGTACTCCTCATCTTCGAAGAAGAGAGCCACGCAACGGTCGGGATCAGAA
CAAACGACTCGACCGCTTATCCAAACGCCGAAGGCTACTCGGTCATCGAAACCACCGACTACAGTTATGTAACGGACCGA
TCCTTCACCTTCGAAGACGGGGCCTCGCTTAACAGCACGCCCGTCATCGTCAGTGTCGGGACGGGAGATACAACCTACAC
CTCCGGTTATCAGGTCGAGGCGATCCTCGCCTATAAAGACACGGCAGATGCCAAAATCGACCAGCTCGCAAGTGAAACAG
ACACAAAAACCGGAAACCTCGAATCGATGGGAGACACGCTCACCGGGTATGAAACCCGACTGACCTCTCTCGAATCATTG
ATGAACACTGCAGTATCCTCGTACAACTCGTATATCGATCTGGCAAATGCGATCACTAAAGAGCAGAAAAAGCTGAACAG
CGATCTCAATGCAAATAAAATAAGCTACACGGAGTATTCGTTGGAATGGGAAGCGCTGGAAGCGGAATATGCGGGATATA
TGGAATTGGCAAATGAGGCTTTGGACGAGTATAATGCCTATTACGATGAGTATCAGACACTCTACGCCGAGTATACATCC
TACTATTCAACATACAGCAGTGCCTACACCGATTACAGCGGTACGATCGAACTGCAGAACGGGTATGTGGACATCTATAA
TCTCATAATCACGGAACCGTATAACCGGGCCTATCTGTACCGGACCGTGCTGGAAGCCACGGGTCTTTGA

Upstream 100 bases:

>100_bases
GCTATTGCAAAACTGCTCCCGATATTTGTCTCATAAATATTAGCCACCAGAGGAGAAAAACTTGGTCCACTTTGGAGGCC
TGATTTCGAATGGAAACCGC

Downstream 100 bases:

>100_bases
GAAGGAGTTCGGGATAAAAAAAAGATACGGGAATGATGTGTTTTCCCGTCGAATCACTTGCGGATAAGTTTGTTCCAGCT
TAACTTTTCGATTCCGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDDTYTGNLTAEYTFPFKDGIVN
LSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPLQEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYS
SESDFRYPIETVIGEFGDCDDKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR
SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNLESMGDTLTGYETRLTSLESL
MNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYSLEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTS
YYSTYSSAYTDYSGTIELQNGYVDIYNLIITEPYNRAYLYRTVLEATGL

Sequences:

>Translated_449_residues
MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDDTYTGNLTAEYTFPFKDGIVN
LSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPLQEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYS
SESDFRYPIETVIGEFGDCDDKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR
SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNLESMGDTLTGYETRLTSLESL
MNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYSLEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTS
YYSTYSSAYTDYSGTIELQNGYVDIYNLIITEPYNRAYLYRTVLEATGL
>Mature_449_residues
MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDDTYTGNLTAEYTFPFKDGIVN
LSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPLQEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYS
SESDFRYPIETVIGEFGDCDDKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR
SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNLESMGDTLTGYETRLTSLESL
MNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYSLEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTS
YYSTYSSAYTDYSGTIELQNGYVDIYNLIITEPYNRAYLYRTVLEATGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50627; Mature: 50627

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDD
CEEEECCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
TYTGNLTAEYTFPFKDGIVNLSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPL
CCCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCH
QEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYSSESDFRYPIETVIGEFGDCD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC
DKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR
CHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEECC
SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNL
CEEECCCCCCCCCCEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCH
ESMGDTLTGYETRLTSLESLMNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYS
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
LEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTSYYSTYSSAYTDYSGTIELQN
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GYVDIYNLIITEPYNRAYLYRTVLEATGL
CEEEEEEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIICHAPREDIIQKNKTYHYIPMKKIIIPLLLAVIIILISCTGYYFFFLSTNPHITPDD
CEEEECCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
TYTGNLTAEYTFPFKDGIVNLSVSVPASVYYGAQNTESKYLPYTKAGDLSFYADLTNDPL
CCCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCH
QEEMYTQILDQTETVRQSWDLTDDEYIELLATFVQSINYSSESDFRYPIETVIGEFGDCD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC
DKSTLLAGLLTRSGYNAVLLIFEEESHATVGIRTNDSTAYPNAEGYSVIETTDYSYVTDR
CHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEECC
SFTFEDGASLNSTPVIVSVGTGDTTYTSGYQVEAILAYKDTADAKIDQLASETDTKTGNL
CEEECCCCCCCCCCEEEEECCCCCEECCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCH
ESMGDTLTGYETRLTSLESLMNTAVSSYNSYIDLANAITKEQKKLNSDLNANKISYTEYS
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
LEWEALEAEYAGYMELANEALDEYNAYYDEYQTLYAEYTSYYSTYSSAYTDYSGTIELQN
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GYVDIYNLIITEPYNRAYLYRTVLEATGL
CEEEEEEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA