| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485005
Identifier: 124485005
GI number: 124485005
Start: 164694
End: 164966
Strand: Reverse
Name: 124485005
Synonym: Mlab_0178
Alternate gene names: NA
Gene position: 164966-164694 (Counterclockwise)
Preceding gene: 124485007
Following gene: 124485002
Centisome position: 9.14
GC content: 47.62
Gene sequence:
>273_bases TTGATCGTCAGTGAAGGGATCCAGCCATACGGTATCTGTGGAAACGCCCAGTCCGGCAATGTTCAGCAGCTGGATCAGGA GATTGCGTCTTTTGGAGAGAGGGACACGTGCAACTGCATCCGGATTATGCAGTGCAGGCGTTTTCCGGTCGTCGGTCCGA ATATTTTTTCCGCGAACTTACTCCAGAAGAAATATCCGAAGACAAGGATACAAATGCCTGCAAGAAACGTGATCATATCG GGTATTCATAGTGAATCATATGACACGTCATAA
Upstream 100 bases:
>100_bases TGTGTTTTTCTTTATTTTCAGCCATCTAGAGACCTTCTACATAGTCATTTATGATGAAATGCTATTTTTATAGGGGCAAG ATTTATTTATTTTTAATTAT
Downstream 100 bases:
>100_bases ATTGTGAAAAAAGATTGGATTATTTGTGTTCCGGGGCCTGACATCCGCAGCCGCAGCCGCCGGGGCAGGCAGCCTTTGCA GCCTTCTCGGCACGGTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MIVSEGIQPYGICGNAQSGNVQQLDQEIASFGERDTCNCIRIMQCRRFPVVGPNIFSANLLQKKYPKTRIQMPARNVIIS GIHSESYDTS
Sequences:
>Translated_90_residues MIVSEGIQPYGICGNAQSGNVQQLDQEIASFGERDTCNCIRIMQCRRFPVVGPNIFSANLLQKKYPKTRIQMPARNVIIS GIHSESYDTS >Mature_90_residues MIVSEGIQPYGICGNAQSGNVQQLDQEIASFGERDTCNCIRIMQCRRFPVVGPNIFSANLLQKKYPKTRIQMPARNVIIS GIHSESYDTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10035; Mature: 10035
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSEGIQPYGICGNAQSGNVQQLDQEIASFGERDTCNCIRIMQCRRFPVVGPNIFSANL CCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH LQKKYPKTRIQMPARNVIISGIHSESYDTS HHHHCCCCEECCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MIVSEGIQPYGICGNAQSGNVQQLDQEIASFGERDTCNCIRIMQCRRFPVVGPNIFSANL CCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH LQKKYPKTRIQMPARNVIISGIHSESYDTS HHHHCCCCEECCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA