Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124484936

Identifier: 124484936

GI number: 124484936

Start: 99630

End: 100403

Strand: Reverse

Name: 124484936

Synonym: Mlab_0108

Alternate gene names: NA

Gene position: 100403-99630 (Counterclockwise)

Preceding gene: 124484938

Following gene: 124484908

Centisome position: 5.56

GC content: 50.78

Gene sequence:

>774_bases
GTGTCAAGACTTATATTCAGCCCAATATCCATCTGGGTCCTGTTTGCCCTGATTCTTCTCGTCGTAATAGGATTACCTTT
ACTGTTCTTCGGACTCATCGGAGCGGCACTTGGGAATCTGGGATTCGGGTTCTGGATGATCGTTCTTTTGATCATAGCAA
TCGTTGTTGGAAGTTTTATCAATATTCCTCTTGGAACGCTGAAACCAAAGAGTCCAAAACCAAAAGAAGAGCCGACCACG
AGAAAACCAACCGGACAGTATGCCCCATCAATGTATGATAAGATGTACCGCACAGACCGGTTCGAACCCGAACCGTACAC
CTCCGGATCTTCACGGGGAACACAGATATCTATAAACGTCGGTGGTGCTGTGATCCCGATCCTGATCTCGATGTACATCA
TCCTAATGGGAGCTTTCGGCACAATATCCAATGACCCGTGGTATCTTGTAAAGATGGCAGGGGGCCTGATCATCACTACG
GTGTGGGTGTATCTCGCTGCAAAACCCGTGCGAGGCATTGGGATCGCGACGCCATTCTTTATCGGCCCGATCGTAACACT
CGCAGCGGCGTTGATTCTCGGCGGAGGGTTCGGGCTTCCGGCAGCAGGGATCGCCTATGTGGCGGGAACACTTGGGACGC
TGATCGGCGCCGATCTTCTGCACCTAAAGGATGTTCCAACACAGGAAACCTCGATGCTTTCAATCGGAGGGGCCGGAACC
TTTGACGGGATTTTCCTTACAGGAATCATCACGGCACTGATCGCTTCATTCTAA

Upstream 100 bases:

>100_bases
GGCTAAATTACCTTAATGAATATGACATGACAGAATATTAAGATAGCGATTGGTTGGTGACCAGATAGATTTTATATCAG
CCCTCACAAAACAATTACCA

Downstream 100 bases:

>100_bases
ATCAACTTCATTTCCCTTTTTTTCTGGCAAATACCTGGCTTCCCCGCATATCCAACCGATCCACATATCGCATGTTAAGG
GGAGAGAAAAATGACCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFINIPLGTLKPKSPKPKEEPTT
RKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINVGGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITT
VWVYLAAKPVRGIGIATPFFIGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT
FDGIFLTGIITALIASF

Sequences:

>Translated_257_residues
MSRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFINIPLGTLKPKSPKPKEEPTT
RKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINVGGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITT
VWVYLAAKPVRGIGIATPFFIGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT
FDGIFLTGIITALIASF
>Mature_256_residues
SRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFINIPLGTLKPKSPKPKEEPTTR
KPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINVGGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITTV
WVYLAAKPVRGIGIATPFFIGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGTF
DGIFLTGIITALIASF

Specific function: Unknown

COG id: COG4089

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27108; Mature: 26977

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
NIPLGTLKPKSPKPKEEPTTRKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
GGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITTVWVYLAAKPVRGIGIATPFF
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHH
IGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
FDGIFLTGIITALIASF
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRLIFSPISIWVLFALILLVVIGLPLLFFGLIGAALGNLGFGFWMIVLLIIAIVVGSFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
NIPLGTLKPKSPKPKEEPTTRKPTGQYAPSMYDKMYRTDRFEPEPYTSGSSRGTQISINV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
GGAVIPILISMYIILMGAFGTISNDPWYLVKMAGGLIITTVWVYLAAKPVRGIGIATPFF
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHH
IGPIVTLAAALILGGGFGLPAAGIAYVAGTLGTLIGADLLHLKDVPTQETSMLSIGGAGT
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
FDGIFLTGIITALIASF
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA