Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124484852

Identifier: 124484852

GI number: 124484852

Start: 25122

End: 26621

Strand: Reverse

Name: 124484852

Synonym: Mlab_0023

Alternate gene names: NA

Gene position: 26621-25122 (Counterclockwise)

Preceding gene: 124484853

Following gene: 124484850

Centisome position: 1.47

GC content: 54.07

Gene sequence:

>1500_bases
ATGGGGCTTGAGCGTTCGGTAGAGGATCAGGTCGCCGAGTCCTATTATAAAGCGAAGATCACCAGAGGCGTCGCCGACCG
GACGTTTCGGACCTGGTTTTCAAAAGGGATCAAAGCCCCCGATCTTGCGAAGTGTGCCGAAGTCAGCGAAATGTACCTGA
TCTATCTGCCGTTCTGGAGGTTCGTGGCCCAGGGAAAAGCCGTCGCCTGCGGATACTCCGAATACACCGAACAGACCGGC
AATGTGATCAGGAACATCTTCGAGGAACTGATCGACGACGAGTTCATCTGGACGGAGTGTGCCTGCGATACCGGAAAATA
CGGCATCGAAAAACTCTGGCTTGACCCAGGAGGGGAGGTTCCTTACGTAAGAGGGTCGGTCGTTTCGATGGAGCCGGGAG
GATCCGCGATCGAGGCAAGCAAACGGGGAAGAGAAGCGGTCCATGAAATGATCAAGATCGCTGTCGAAAAACGAATCGAT
AGGATCACGCTGAAAAAGTCGTTTCTGATTCCAAAAGTGTTCGAACTGGTGTATGCCCCTGTCTGGATAGCGCATTACTC
CTATAAGGGAGGCCACTATACGGCGATCGTGGATGCCGTGCGCGGCGAGGTTTTAGGCGGGACAAGCCCGATCAATCTGA
CCGCACGCACCCGGATGATGATCCTCTCCCTCGCTCTTGGAGGGATCATGATCGGTTCATCGGTCGCCATGCTCATTCAT
ACAGGGCCGTATCAGCTGGCCGAGATGTTCCAGATCATCCTGCTTCTGCTGGGTATTGCCATGTGCATGGCGGGATATCC
GGCATTCAAAGAGGGGAGGACCTTCGTCGCCACGGGAACGATGACGCATGTTGCGTCGCTTCGCCCCGCAGTAAGAGTGC
CCAAACAGCTGACCGATCAGGAGATTCTGAACCATGACTCAACGATCCTGCAGTGCCCGCTCTGCGGGGAAGAAGTGGAG
CAGCCTTGGGGAGAGGTTATCACCCCCTGCAAGAAATGCTCCCACCTGCTGGATATCACCGCAAATACGGTCAAAACAGT
GCCCTACGATGTTGCCAAACCCGATCTTCTGGCAAAAGTAGCGATGGAGGGAGTGAAAGCCGACTTCATTCCATTCTGGC
GGTTCGACGTGGACCTGGAAGTGACCGACAAGCTCACCGGCGGGGATACGACCACCGGCCTTCCCGATATTTCCGGTAAA
CGCAGCTATTATATTTGTGCGGCCGATATCCCGCGGTATCTTGCCGAGCCCTGGGAGATCGATATGACGATTCGAAACCC
CGAGATCGTCGAAGTCGTTGCCGGTTATGAAGGGAATTATATGCCGATCCTGATCAACAATAACACGGCACGGGAACTCA
CGGAATTTCTGTATCTCCGCTACGAGACGGAAAAGCCGGGTATCCTGCAGGTCCTCAGATACAACTTCACGGTGGAAAAC
TCGCGGATCGTCTATATCCCGTATTATAAAGAAGAGACATCATACATTCCGGGGATCTGA

Upstream 100 bases:

>100_bases
AGTCCTTGGCTGTTTCTTCTGGTGGCAGCAGTTCTCATCTTTTTCCTGTATCAAAGCGAGATGCTCGGTATGATAAACCT
CAAGCGCAGGGAGGGAAAAG

Downstream 100 bases:

>100_bases
TACCGCGTCTGGACACTGATCTAAAAAACCGGATGTTTGACAGACCCGGGGTGCGGGAAAAAGAAAATATCCATTTGCCC
CCGCCTCATTTATGGGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MGLERSVEDQVAESYYKAKITRGVADRTFRTWFSKGIKAPDLAKCAEVSEMYLIYLPFWRFVAQGKAVACGYSEYTEQTG
NVIRNIFEELIDDEFIWTECACDTGKYGIEKLWLDPGGEVPYVRGSVVSMEPGGSAIEASKRGREAVHEMIKIAVEKRID
RITLKKSFLIPKVFELVYAPVWIAHYSYKGGHYTAIVDAVRGEVLGGTSPINLTARTRMMILSLALGGIMIGSSVAMLIH
TGPYQLAEMFQIILLLLGIAMCMAGYPAFKEGRTFVATGTMTHVASLRPAVRVPKQLTDQEILNHDSTILQCPLCGEEVE
QPWGEVITPCKKCSHLLDITANTVKTVPYDVAKPDLLAKVAMEGVKADFIPFWRFDVDLEVTDKLTGGDTTTGLPDISGK
RSYYICAADIPRYLAEPWEIDMTIRNPEIVEVVAGYEGNYMPILINNNTARELTEFLYLRYETEKPGILQVLRYNFTVEN
SRIVYIPYYKEETSYIPGI

Sequences:

>Translated_499_residues
MGLERSVEDQVAESYYKAKITRGVADRTFRTWFSKGIKAPDLAKCAEVSEMYLIYLPFWRFVAQGKAVACGYSEYTEQTG
NVIRNIFEELIDDEFIWTECACDTGKYGIEKLWLDPGGEVPYVRGSVVSMEPGGSAIEASKRGREAVHEMIKIAVEKRID
RITLKKSFLIPKVFELVYAPVWIAHYSYKGGHYTAIVDAVRGEVLGGTSPINLTARTRMMILSLALGGIMIGSSVAMLIH
TGPYQLAEMFQIILLLLGIAMCMAGYPAFKEGRTFVATGTMTHVASLRPAVRVPKQLTDQEILNHDSTILQCPLCGEEVE
QPWGEVITPCKKCSHLLDITANTVKTVPYDVAKPDLLAKVAMEGVKADFIPFWRFDVDLEVTDKLTGGDTTTGLPDISGK
RSYYICAADIPRYLAEPWEIDMTIRNPEIVEVVAGYEGNYMPILINNNTARELTEFLYLRYETEKPGILQVLRYNFTVEN
SRIVYIPYYKEETSYIPGI
>Mature_498_residues
GLERSVEDQVAESYYKAKITRGVADRTFRTWFSKGIKAPDLAKCAEVSEMYLIYLPFWRFVAQGKAVACGYSEYTEQTGN
VIRNIFEELIDDEFIWTECACDTGKYGIEKLWLDPGGEVPYVRGSVVSMEPGGSAIEASKRGREAVHEMIKIAVEKRIDR
ITLKKSFLIPKVFELVYAPVWIAHYSYKGGHYTAIVDAVRGEVLGGTSPINLTARTRMMILSLALGGIMIGSSVAMLIHT
GPYQLAEMFQIILLLLGIAMCMAGYPAFKEGRTFVATGTMTHVASLRPAVRVPKQLTDQEILNHDSTILQCPLCGEEVEQ
PWGEVITPCKKCSHLLDITANTVKTVPYDVAKPDLLAKVAMEGVKADFIPFWRFDVDLEVTDKLTGGDTTTGLPDISGKR
SYYICAADIPRYLAEPWEIDMTIRNPEIVEVVAGYEGNYMPILINNNTARELTEFLYLRYETEKPGILQVLRYNFTVENS
RIVYIPYYKEETSYIPGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55962; Mature: 55831

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLERSVEDQVAESYYKAKITRGVADRTFRTWFSKGIKAPDLAKCAEVSEMYLIYLPFWR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEHHHHH
FVAQGKAVACGYSEYTEQTGNVIRNIFEELIDDEFIWTECACDTGKYGIEKLWLDPGGEV
HHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCEEEEECCCCCC
PYVRGSVVSMEPGGSAIEASKRGREAVHEMIKIAVEKRIDRITLKKSFLIPKVFELVYAP
CEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWIAHYSYKGGHYTAIVDAVRGEVLGGTSPINLTARTRMMILSLALGGIMIGSSVAMLIH
HHEEEEECCCCCEEEEHHHHHCHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEE
TGPYQLAEMFQIILLLLGIAMCMAGYPAFKEGRTFVATGTMTHVASLRPAVRVPKQLTDQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHCCHHHHCCHHHHHH
EILNHDSTILQCPLCGEEVEQPWGEVITPCKKCSHLLDITANTVKTVPYDVAKPDLLAKV
HHHCCCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHH
AMEGVKADFIPFWRFDVDLEVTDKLTGGDTTTGLPDISGKRSYYICAADIPRYLAEPWEI
HHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCEEE
DMTIRNPEIVEVVAGYEGNYMPILINNNTARELTEFLYLRYETEKPGILQVLRYNFTVEN
EEEECCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHEEEECCCCCHHHHEEECEEECC
SRIVYIPYYKEETSYIPGI
CEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
GLERSVEDQVAESYYKAKITRGVADRTFRTWFSKGIKAPDLAKCAEVSEMYLIYLPFWR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEHHHHH
FVAQGKAVACGYSEYTEQTGNVIRNIFEELIDDEFIWTECACDTGKYGIEKLWLDPGGEV
HHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCEEEEECCCCCC
PYVRGSVVSMEPGGSAIEASKRGREAVHEMIKIAVEKRIDRITLKKSFLIPKVFELVYAP
CEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWIAHYSYKGGHYTAIVDAVRGEVLGGTSPINLTARTRMMILSLALGGIMIGSSVAMLIH
HHEEEEECCCCCEEEEHHHHHCHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEEE
TGPYQLAEMFQIILLLLGIAMCMAGYPAFKEGRTFVATGTMTHVASLRPAVRVPKQLTDQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHCCHHHHCCHHHHHH
EILNHDSTILQCPLCGEEVEQPWGEVITPCKKCSHLLDITANTVKTVPYDVAKPDLLAKV
HHHCCCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHH
AMEGVKADFIPFWRFDVDLEVTDKLTGGDTTTGLPDISGKRSYYICAADIPRYLAEPWEI
HHHCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCEEE
DMTIRNPEIVEVVAGYEGNYMPILINNNTARELTEFLYLRYETEKPGILQVLRYNFTVEN
EEEECCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHEEEECCCCCHHHHEEECEEECC
SRIVYIPYYKEETSYIPGI
CEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA