| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124484853
Identifier: 124484853
GI number: 124484853
Start: 26611
End: 27291
Strand: Reverse
Name: 124484853
Synonym: Mlab_0024
Alternate gene names: NA
Gene position: 27291-26611 (Counterclockwise)
Preceding gene: 124484858
Following gene: 124484852
Centisome position: 1.51
GC content: 53.45
Gene sequence:
>681_bases ATGGCAGAAATACCAGAAGGAATACCCGCACCTCTGCAGTGTTCCGGCGTAATCGCCCCTCAGATCGATGAGGCGCGGGC GCGGGAACTCGCCCGCGAGTGGCTGGAGTCGGACACCAATCCGTTCATCCCCGAAGACAAAATCAGATTCGGGAAAGCCG TCATGCTCTACTACCCCTTCTGGAGATACGTCAGGGAGGACGGATGCACGGATGTGACGGTCTACCGGCCGGCCTGCGGG ACGCTCCTTTCGGGTCTGCAGAATATGCATAGAGATGATAACGAGATCGTCCCGATTCCGGATGAGGCGAATATCCTGCC TGCCACCATTCAATCCTTTGTATATTACCCCGAGCTGCACGGTATCGCCCGCTCTGAGGATCTGATTGGAATCCCGCTTT GGCTGATCAGCTACAAAGTGAAAAAATCCATTTATATGGTCGAGGTGGACGCGGCATCCGGCAAAATCTACGAAGAGTGG CACCCAATCAAAGAGCCGGTCAACTGGAGAAAGACCGCACTGATCGCCTCCATACCGTTAATGATCCTCTCCCTAATTGC CGTCTACTTTAGTCCTTGGCTGTTTCTTCTGGTGGCAGCAGTTCTCATCTTTTTCCTGTATCAAAGCGAGATGCTCGGTA TGATAAACCTCAAGCGCAGGGAGGGAAAAGATGGGGCTTGA
Upstream 100 bases:
>100_bases TAGGTATAAATATGCTCCCAATTGATTGGAAGACCGGTGCCGCCGTGGAGTGAGGCAAGAAAACATCTATCTGAATGTAC GTAAATATATTGACTTATTT
Downstream 100 bases:
>100_bases GCGTTCGGTAGAGGATCAGGTCGCCGAGTCCTATTATAAAGCGAAGATCACCAGAGGCGTCGCCGACCGGACGTTTCGGA CCTGGTTTTCAAAAGGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MAEIPEGIPAPLQCSGVIAPQIDEARARELAREWLESDTNPFIPEDKIRFGKAVMLYYPFWRYVREDGCTDVTVYRPACG TLLSGLQNMHRDDNEIVPIPDEANILPATIQSFVYYPELHGIARSEDLIGIPLWLISYKVKKSIYMVEVDAASGKIYEEW HPIKEPVNWRKTALIASIPLMILSLIAVYFSPWLFLLVAAVLIFFLYQSEMLGMINLKRREGKDGA
Sequences:
>Translated_226_residues MAEIPEGIPAPLQCSGVIAPQIDEARARELAREWLESDTNPFIPEDKIRFGKAVMLYYPFWRYVREDGCTDVTVYRPACG TLLSGLQNMHRDDNEIVPIPDEANILPATIQSFVYYPELHGIARSEDLIGIPLWLISYKVKKSIYMVEVDAASGKIYEEW HPIKEPVNWRKTALIASIPLMILSLIAVYFSPWLFLLVAAVLIFFLYQSEMLGMINLKRREGKDGA >Mature_225_residues AEIPEGIPAPLQCSGVIAPQIDEARARELAREWLESDTNPFIPEDKIRFGKAVMLYYPFWRYVREDGCTDVTVYRPACGT LLSGLQNMHRDDNEIVPIPDEANILPATIQSFVYYPELHGIARSEDLIGIPLWLISYKVKKSIYMVEVDAASGKIYEEWH PIKEPVNWRKTALIASIPLMILSLIAVYFSPWLFLLVAAVLIFFLYQSEMLGMINLKRREGKDGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25749; Mature: 25618
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIPEGIPAPLQCSGVIAPQIDEARARELAREWLESDTNPFIPEDKIRFGKAVMLYYPF CCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHH WRYVREDGCTDVTVYRPACGTLLSGLQNMHRDDNEIVPIPDEANILPATIQSFVYYPELH HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH GIARSEDLIGIPLWLISYKVKKSIYMVEVDAASGKIYEEWHPIKEPVNWRKTALIASIPL CCCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHH MILSLIAVYFSPWLFLLVAAVLIFFLYQSEMLGMINLKRREGKDGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEIPEGIPAPLQCSGVIAPQIDEARARELAREWLESDTNPFIPEDKIRFGKAVMLYYPF CCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHH WRYVREDGCTDVTVYRPACGTLLSGLQNMHRDDNEIVPIPDEANILPATIQSFVYYPELH HHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH GIARSEDLIGIPLWLISYKVKKSIYMVEVDAASGKIYEEWHPIKEPVNWRKTALIASIPL CCCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHH MILSLIAVYFSPWLFLLVAAVLIFFLYQSEMLGMINLKRREGKDGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA