| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124484850
Identifier: 124484850
GI number: 124484850
Start: 22870
End: 24018
Strand: Reverse
Name: 124484850
Synonym: Mlab_0021
Alternate gene names: NA
Gene position: 24018-22870 (Counterclockwise)
Preceding gene: 124484852
Following gene: 124484849
Centisome position: 1.33
GC content: 46.48
Gene sequence:
>1149_bases ATGATAATTTTGGAAAAACCATATGTTTCCGACTTTCTGCTAGAATATCTCGCAGCAAACAAAGTTCCCGTACTAAAAAA CGAATACGCAGTCTCCAACAGCAGAGGAAATGCCCTGCATTTCATAGAGAGCCACGAGGCTGTAGAAAGATATCATGACG GCGAACGGATCTACACCGTATCGGAAAACGCCCTTGACTGGATTTATGTAAACCTGCCTGCAAGCGAACTTGTCCGTAAG ATCGGCATCCTCAAAGACAAGGCGCTGTTTCGTAAAACCGTATCCAGCCTCTACCCGAATTTGTTTTTCAAAGAGGTAAC GCTGGACGAACTGCGAAACGGCGATCATACGCACATTCCATATCCGGTCATTCTGAAACCTTCCGTCGGATTTTTCAGCG TCGGCGTCTATGCGCTTTTCAATGAGGAAGATCTGAAAAACGCGGTCTTAGACATCGAGAAAAATATCCAAAAATGGGCG GCCGATTTCCCGGAAACCGTGATCGGGTCAACCTTCCTTCTCGAGCAGTACATCAGGGGTACGGAGTATGCGATCGACGC GTATTACGACACAGAAGGAAAACCCGTCATACTCAACATCTTTACCCATCGGTTTGCCTCTGAGTCCGATGTAAGAGACC GTATCTACTATACGTCAGCAGAAATCATCGGGCAGTATCTTGAGCCGTTTACCCGCTTTCTCGAACGGATCAATACTCAA CTGAACATAACCGATTTTCCGATGCATATCGAAGTCAGAGTAACAGAAGACGACGTCATCCCAATCGAATTCAATCCTTT GCGGTTCGCCGGCTCCTGTTCAACCGATATTGCATATTATGCTTACGGCATAAACACGGTCGACTGCTATCTGAATCAGA TCAAGCCGGATTTTGCTGAAATTCTCGCCAGAAAATCCGGTAAAATTTACAGTATGATCCTGGTCGACAAGAGTGGAAAA GAGATAGACAGCGGCCGATTCGACTACAGCAGACTCTACGATGAGTTTGAACATGTCCTGGACATCCGAAAAATCGAGGC TCCTGAAATGGGATTGTTTGCTTTTCTGTTTACGGAGACAAACGTCGGGAACGAACAGGAACTTGACAGGGCCCTGGTTT CCGACTTTTCCGAGTACCTGCTCGAATAA
Upstream 100 bases:
>100_bases TATAAGTAAATATTTACCGGCTCAACTAGCAATACTACATGTAGTAGTCTGCTTTACAGCAAATTCGTATAAATTCAAAT AATTTATCGAGGGTGATTCT
Downstream 100 bases:
>100_bases TCCTGGTCCGGCAGCGAACGGTGTCTAAAGGAAAAGTGAATACCCCGCCGGTGCCAAAGTTAAGGAAAGGGCACCCCAAA AAATTCATGACGAAAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MIILEKPYVSDFLLEYLAANKVPVLKNEYAVSNSRGNALHFIESHEAVERYHDGERIYTVSENALDWIYVNLPASELVRK IGILKDKALFRKTVSSLYPNLFFKEVTLDELRNGDHTHIPYPVILKPSVGFFSVGVYALFNEEDLKNAVLDIEKNIQKWA ADFPETVIGSTFLLEQYIRGTEYAIDAYYDTEGKPVILNIFTHRFASESDVRDRIYYTSAEIIGQYLEPFTRFLERINTQ LNITDFPMHIEVRVTEDDVIPIEFNPLRFAGSCSTDIAYYAYGINTVDCYLNQIKPDFAEILARKSGKIYSMILVDKSGK EIDSGRFDYSRLYDEFEHVLDIRKIEAPEMGLFAFLFTETNVGNEQELDRALVSDFSEYLLE
Sequences:
>Translated_382_residues MIILEKPYVSDFLLEYLAANKVPVLKNEYAVSNSRGNALHFIESHEAVERYHDGERIYTVSENALDWIYVNLPASELVRK IGILKDKALFRKTVSSLYPNLFFKEVTLDELRNGDHTHIPYPVILKPSVGFFSVGVYALFNEEDLKNAVLDIEKNIQKWA ADFPETVIGSTFLLEQYIRGTEYAIDAYYDTEGKPVILNIFTHRFASESDVRDRIYYTSAEIIGQYLEPFTRFLERINTQ LNITDFPMHIEVRVTEDDVIPIEFNPLRFAGSCSTDIAYYAYGINTVDCYLNQIKPDFAEILARKSGKIYSMILVDKSGK EIDSGRFDYSRLYDEFEHVLDIRKIEAPEMGLFAFLFTETNVGNEQELDRALVSDFSEYLLE >Mature_382_residues MIILEKPYVSDFLLEYLAANKVPVLKNEYAVSNSRGNALHFIESHEAVERYHDGERIYTVSENALDWIYVNLPASELVRK IGILKDKALFRKTVSSLYPNLFFKEVTLDELRNGDHTHIPYPVILKPSVGFFSVGVYALFNEEDLKNAVLDIEKNIQKWA ADFPETVIGSTFLLEQYIRGTEYAIDAYYDTEGKPVILNIFTHRFASESDVRDRIYYTSAEIIGQYLEPFTRFLERINTQ LNITDFPMHIEVRVTEDDVIPIEFNPLRFAGSCSTDIAYYAYGINTVDCYLNQIKPDFAEILARKSGKIYSMILVDKSGK EIDSGRFDYSRLYDEFEHVLDIRKIEAPEMGLFAFLFTETNVGNEQELDRALVSDFSEYLLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44101; Mature: 44101
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILEKPYVSDFLLEYLAANKVPVLKNEYAVSNSRGNALHFIESHEAVERYHDGERIYTV CEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEE SENALDWIYVNLPASELVRKIGILKDKALFRKTVSSLYPNLFFKEVTLDELRNGDHTHIP ECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHHHHCCCCCCCCC YPVILKPSVGFFSVGVYALFNEEDLKNAVLDIEKNIQKWAADFPETVIGSTFLLEQYIRG CCEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC TEYAIDAYYDTEGKPVILNIFTHRFASESDVRDRIYYTSAEIIGQYLEPFTRFLERINTQ CCEEEEEEECCCCCEEEEEEEHHHCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHCCE LNITDFPMHIEVRVTEDDVIPIEFNPLRFAGSCSTDIAYYAYGINTVDCYLNQIKPDFAE EEEEECCEEEEEEECCCCEEEEEECCCEECCCCCCCEEEEEECCCHHHHHHHHCCHHHHH ILARKSGKIYSMILVDKSGKEIDSGRFDYSRLYDEFEHVLDIRKIEAPEMGLFAFLFTET HHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC NVGNEQELDRALVSDFSEYLLE CCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIILEKPYVSDFLLEYLAANKVPVLKNEYAVSNSRGNALHFIESHEAVERYHDGERIYTV CEEECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHCCCCEEEEE SENALDWIYVNLPASELVRKIGILKDKALFRKTVSSLYPNLFFKEVTLDELRNGDHTHIP ECCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHHHHCCCCCCCCC YPVILKPSVGFFSVGVYALFNEEDLKNAVLDIEKNIQKWAADFPETVIGSTFLLEQYIRG CCEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC TEYAIDAYYDTEGKPVILNIFTHRFASESDVRDRIYYTSAEIIGQYLEPFTRFLERINTQ CCEEEEEEECCCCCEEEEEEEHHHCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHCCE LNITDFPMHIEVRVTEDDVIPIEFNPLRFAGSCSTDIAYYAYGINTVDCYLNQIKPDFAE EEEEECCEEEEEEECCCCEEEEEECCCEECCCCCCCEEEEEECCCHHHHHHHHCCHHHHH ILARKSGKIYSMILVDKSGKEIDSGRFDYSRLYDEFEHVLDIRKIEAPEMGLFAFLFTET HHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC NVGNEQELDRALVSDFSEYLLE CCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA