Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is gspA [H]

Identifier: 124266224

GI number: 124266224

Start: 1101478

End: 1103169

Strand: Direct

Name: gspA [H]

Synonym: Mpe_A1031

Alternate gene names: 124266224

Gene position: 1101478-1103169 (Clockwise)

Preceding gene: 124266223

Following gene: 124266225

Centisome position: 27.24

GC content: 71.99

Gene sequence:

>1692_bases
ATGTACGCGCAATTCTTCGGCCTGAGCCAGGAGCCTTTCTCGATCGCGCCCGACCCGCGTTTCCTCTTCATGAGCGAGCG
GCACCGGGAGGCGCTGGCCCATCTGCTCTACGGCGTGCGCGGCGGCGGCGGCTTCGTGCTGCTGACCGGCGAGATCGGGG
CCGGCAAGACCACGGTGTGTCGCCTGCTGCTGGAGCAGGTGCCCAAGCGCTGCAACGTCGCCTACATCTTCAACCCCAAG
CTCACCGTCGAGGAGCTGCTGAAGTCGGTGTGCGACGAGTTCGGCATCCCCTACGCGCACCCGGGCCCCGGCGCGGCCAC
GGTGAAGGACTACCTCGATCCGCTCAATCGCTTCCTGCTGCAGACCCATGCGGTCGGACAGAGCAACGTGCTGATCATCG
ACGAGGCGCAGAACCTGTCGGCCGACGTGCTGGAACAACTGCGCCTGCTGACCAACCTGGAGACCAACGAGCGCAAGCTG
CTGCAGATCGTGCTGATCGGGCAACCCGAGCTGCGCCAGATGCTGGCGCGGCCCGAACTGGAGCAGCTGGCGCAGCGCGT
GATCGCGCGCTACCACCTCGAGGCGCTGACGGAGACCGAGACGCTGCAGTACATCCGGCACCGACTCACCATCTCGGGCC
TGAACCGCGCGCTGCCTTTCGATCGCGAGTCGGTGCAGCGCATCCACCAGCTGTCGCGCGGCGTGCCGCGCCGCATCAAC
CTGCTGTGTGACCGGGCGCTGCTCGGCGCCTATTCGTCCGGCGCGCACCGCGTGCGGCGCGAGATCGTCGACAAGGCCGC
GCGCGAGGTGTTCGAGACCCCGTCGCCGATGAACCCGCGCCGCTGGTTGCAGCGGCGTCCGGCGGTGCTGGGGCTGGGCC
TGGTCGGCGGCGCCGTGCTGTTCGCGGCGGGCAGCTGGATGCTCGGCGGCGGGCGGTCGTCATCGGAACGCGGCGCCGCG
AGCGCGGTGACGGCGGTCGCGGCCTCGGCGAAGCCGGCGCCCGAAGCGGCGGCCTCTACCGCGGCGGTGGCCCCGCCACC
GGCGGCCGCCGCCTCGGTGGCTGCCTCGGCGCCGGCGCCGCTGGCGCTGGCCGCTGCCGATCTGCAGGCGCAGTTCAAGA
CCCTGGTGCGCGACCCGAACGAGGCGCTGCGGGAGCTGGCGCCGGCCTGGAAGCTGAGCCTGGCCGACGACGGCGACCCG
TGCCTGCTTGTGCCGGCGCAGCAGGTGCACTGCCACGCGGGTCGCAGCAATCTCGCGCTGGTGCGGTTGCTCGGTCGGCC
CGGCATCGTGAGCCTGAATGACGCGGCCGGGCAGCCGGTCTATGCACAGCTCACCGGCCTCACGGCGCAGAGCGCGACGC
TGCGCATGGGCGGCGTCGCGCAGACCCTCACGCTCGGTTCCTTCACGCGCCTGTGGCGCGGCGATTTCACGACACTGTGG
CGCGTGCCGCCGGGCTACACCGTTGCCGCGGCGGGCAAGGCGGCCATCCCCGCCGACTGGCTGGCCGCACGGCTGGCCAC
CGCGGCCGGCGACGCCGCACCGGGCGAGACGTCGGCGGCGGCGCTCAAGCCGCGCATCGCCGCCTTCCAGTCCACCCAGG
GTCTGGCACCGGATGGTCTGGCCGGGCCGATCACACTGATGCAGCTCAACCGCGCCACCGGCGTGGACGAGCCCCGCCTG
CAGACCGAGTGA

Upstream 100 bases:

>100_bases
CTGGCCGACGAGACGCTGCGGCGCCTGGCTGCGTGAGCCGCTGCCTCGAGCAGAACCGGCCCGGAAGGCCGCGGCTCCGC
CGGAAAGTATCCTCTGCACC

Downstream 100 bases:

>100_bases
CGTACCGATGTCCTACATCCTCGAAGCCCTCCGCAAGGCCGACGCCGAACGCGATCGCGAACGCGGCGCGTTGCCCGACC
TGCATGCGCAGCCGGTGCCG

Product: general secretion pathway protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MYAQFFGLSQEPFSIAPDPRFLFMSERHREALAHLLYGVRGGGGFVLLTGEIGAGKTTVCRLLLEQVPKRCNVAYIFNPK
LTVEELLKSVCDEFGIPYAHPGPGAATVKDYLDPLNRFLLQTHAVGQSNVLIIDEAQNLSADVLEQLRLLTNLETNERKL
LQIVLIGQPELRQMLARPELEQLAQRVIARYHLEALTETETLQYIRHRLTISGLNRALPFDRESVQRIHQLSRGVPRRIN
LLCDRALLGAYSSGAHRVRREIVDKAAREVFETPSPMNPRRWLQRRPAVLGLGLVGGAVLFAAGSWMLGGGRSSSERGAA
SAVTAVAASAKPAPEAAASTAAVAPPPAAAASVAASAPAPLALAAADLQAQFKTLVRDPNEALRELAPAWKLSLADDGDP
CLLVPAQQVHCHAGRSNLALVRLLGRPGIVSLNDAAGQPVYAQLTGLTAQSATLRMGGVAQTLTLGSFTRLWRGDFTTLW
RVPPGYTVAAAGKAAIPADWLAARLATAAGDAAPGETSAAALKPRIAAFQSTQGLAPDGLAGPITLMQLNRATGVDEPRL
QTE

Sequences:

>Translated_563_residues
MYAQFFGLSQEPFSIAPDPRFLFMSERHREALAHLLYGVRGGGGFVLLTGEIGAGKTTVCRLLLEQVPKRCNVAYIFNPK
LTVEELLKSVCDEFGIPYAHPGPGAATVKDYLDPLNRFLLQTHAVGQSNVLIIDEAQNLSADVLEQLRLLTNLETNERKL
LQIVLIGQPELRQMLARPELEQLAQRVIARYHLEALTETETLQYIRHRLTISGLNRALPFDRESVQRIHQLSRGVPRRIN
LLCDRALLGAYSSGAHRVRREIVDKAAREVFETPSPMNPRRWLQRRPAVLGLGLVGGAVLFAAGSWMLGGGRSSSERGAA
SAVTAVAASAKPAPEAAASTAAVAPPPAAAASVAASAPAPLALAAADLQAQFKTLVRDPNEALRELAPAWKLSLADDGDP
CLLVPAQQVHCHAGRSNLALVRLLGRPGIVSLNDAAGQPVYAQLTGLTAQSATLRMGGVAQTLTLGSFTRLWRGDFTTLW
RVPPGYTVAAAGKAAIPADWLAARLATAAGDAAPGETSAAALKPRIAAFQSTQGLAPDGLAGPITLMQLNRATGVDEPRL
QTE
>Mature_563_residues
MYAQFFGLSQEPFSIAPDPRFLFMSERHREALAHLLYGVRGGGGFVLLTGEIGAGKTTVCRLLLEQVPKRCNVAYIFNPK
LTVEELLKSVCDEFGIPYAHPGPGAATVKDYLDPLNRFLLQTHAVGQSNVLIIDEAQNLSADVLEQLRLLTNLETNERKL
LQIVLIGQPELRQMLARPELEQLAQRVIARYHLEALTETETLQYIRHRLTISGLNRALPFDRESVQRIHQLSRGVPRRIN
LLCDRALLGAYSSGAHRVRREIVDKAAREVFETPSPMNPRRWLQRRPAVLGLGLVGGAVLFAAGSWMLGGGRSSSERGAA
SAVTAVAASAKPAPEAAASTAAVAPPPAAAASVAASAPAPLALAAADLQAQFKTLVRDPNEALRELAPAWKLSLADDGDP
CLLVPAQQVHCHAGRSNLALVRLLGRPGIVSLNDAAGQPVYAQLTGLTAQSATLRMGGVAQTLTLGSFTRLWRGDFTTLW
RVPPGYTVAAAGKAAIPADWLAARLATAAGDAAPGETSAAALKPRIAAFQSTQGLAPDGLAGPITLMQLNRATGVDEPRL
QTE

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3267

COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exeA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 60176; Mature: 60176

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAQFFGLSQEPFSIAPDPRFLFMSERHREALAHLLYGVRGGGGFVLLTGEIGAGKTTVC
CCCHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
RLLLEQVPKRCNVAYIFNPKLTVEELLKSVCDEFGIPYAHPGPGAATVKDYLDPLNRFLL
HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QTHAVGQSNVLIIDEAQNLSADVLEQLRLLTNLETNERKLLQIVLIGQPELRQMLARPEL
HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCH
EQLAQRVIARYHLEALTETETLQYIRHRLTISGLNRALPFDRESVQRIHQLSRGVPRRIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH
LLCDRALLGAYSSGAHRVRREIVDKAAREVFETPSPMNPRRWLQRRPAVLGLGLVGGAVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEHHHHHHHH
FAAGSWMLGGGRSSSERGAASAVTAVAASAKPAPEAAASTAAVAPPPAAAASVAASAPAP
HHCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCC
LALAAADLQAQFKTLVRDPNEALRELAPAWKLSLADDGDPCLLVPAQQVHCHAGRSNLAL
HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEEECCCCCCEEEECCHHHHHHCCCCCEEE
VRLLGRPGIVSLNDAAGQPVYAQLTGLTAQSATLRMGGVAQTLTLGSFTRLWRGDFTTLW
EEEECCCCEEEECCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCEEE
RVPPGYTVAAAGKAAIPADWLAARLATAAGDAAPGETSAAALKPRIAAFQSTQGLAPDGL
ECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
AGPITLMQLNRATGVDEPRLQTE
CCCEEEEEEHHHCCCCCCCCCCC
>Mature Secondary Structure
MYAQFFGLSQEPFSIAPDPRFLFMSERHREALAHLLYGVRGGGGFVLLTGEIGAGKTTVC
CCCHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
RLLLEQVPKRCNVAYIFNPKLTVEELLKSVCDEFGIPYAHPGPGAATVKDYLDPLNRFLL
HHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QTHAVGQSNVLIIDEAQNLSADVLEQLRLLTNLETNERKLLQIVLIGQPELRQMLARPEL
HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCH
EQLAQRVIARYHLEALTETETLQYIRHRLTISGLNRALPFDRESVQRIHQLSRGVPRRIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH
LLCDRALLGAYSSGAHRVRREIVDKAAREVFETPSPMNPRRWLQRRPAVLGLGLVGGAVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEHHHHHHHH
FAAGSWMLGGGRSSSERGAASAVTAVAASAKPAPEAAASTAAVAPPPAAAASVAASAPAP
HHCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCC
LALAAADLQAQFKTLVRDPNEALRELAPAWKLSLADDGDPCLLVPAQQVHCHAGRSNLAL
HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHEEEECCCCCCEEEECCHHHHHHCCCCCEEE
VRLLGRPGIVSLNDAAGQPVYAQLTGLTAQSATLRMGGVAQTLTLGSFTRLWRGDFTTLW
EEEECCCCEEEECCCCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCEEE
RVPPGYTVAAAGKAAIPADWLAARLATAAGDAAPGETSAAALKPRIAAFQSTQGLAPDGL
ECCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
AGPITLMQLNRATGVDEPRLQTE
CCCEEEEEEHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7961440 [H]