| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is cstA [H]
Identifier: 124266218
GI number: 124266218
Start: 1094611
End: 1096677
Strand: Reverse
Name: cstA [H]
Synonym: Mpe_A1025
Alternate gene names: 124266218
Gene position: 1096677-1094611 (Counterclockwise)
Preceding gene: 124266219
Following gene: 124266217
Centisome position: 27.12
GC content: 67.59
Gene sequence:
>2067_bases ATGACCCATCTACGCAAGCACCTTCCCTGGGTGCTCGTCGCCATCGTCGGCGCGTTCGCGCTGGCGACCATCGCGCTGCA GCGCGGTGAAGCCATCAGCGCCCTGTGGGTGGTGGTGGCCGCCCTGTGCGTCTACCTCATCGCCTACCGCTACTACAGCC TGTTCCTGGCGACCAAGGTGCTGGGTCTCGATCCGAACCGGCAGACGCCGGCACACCGCCACAACGATGGCCTGGACTAC GTGCCGACCAACAAGTACGTGCTCTACGGCCACCACTTCGCCGCGATCGCGGGCGCCGGTCCGCTGGTCGGCCCGGTACT GGCCGCACAGATGGGCTACCTGCCGGGCATGCTGTGGCTGCTGGCCGGCGTGGTGTTCGCCGGCGCGGTGCAGGACTTCA TCGTGCTGTTCATCTCCACGCGGCGCGACGGCCGTTCGCTCGGCGAGCTGGTGAAGCAGGAGATGGGCACGGTGCCGGGC GTCATCACGCTGTTCGGCGCCTTCATGATCATGATCATCATCCTGGCGGTGCTGGCGCTGATCGTCGTCAAGGCGCTGGC GCACTCGCCGTGGGGTGCGGTCACCGTGGGCCTGACGATCCCGGTCGCGCTGTTCATGGGCATCTACAGCCGCTACCTGC GGCCAGGGCGCATCGGCGAGGTCTCGGCGATCGGCTTCGTGCTGCTGATGGCGGCCATCTGGCTGGGCGGCTGGGTGCAC GAGCATGCGGCCCTGTCCGCGCTGTTCGACTTCGACGGCAAGGCTCTCACCTGGATGCTGATCGGCTACGGCTTCATCGC CTCGGTCTTGCCGGTGTGGCTGCTGCTGGCGCCGCGCGACTACCTGTCGACCTTCCTGAAGATCGGCACCATCATCGCGC TGGCGATCGGCATCCTGATCGTCGCACCGACGCTGCAGATGCCGGCACTGACCCAGTTCGCGCAGGGCAACGGCCCGGTG TGGTCGGGCAACCTGTTCCCCTTCCTGTTCATCACCATCGCCTGCGGCGCGGTGTCGGGCTTCCATGCGCTGATCTCGTC GGGCACCACGCCCAAGATGCTGGAGAACGAGACGCACGCGCGCTTCATCGGCTACGGCGGCATGCTGGCCGAGTCCTTCG TCGCGATCATGGCGCTGGTGGCGGCCTCGGTGATCCAGCCGGGCATCTACTTCGCGATGAACAGCCCGGCCGCGCTGATC GGCACGACGCCGGAGGCGGTGGCGCAGACCCTGTCGACCTGGGGCTTCGTGATCACGCCCGACGTGCTGATCCAGACCGC CAAGGACGTGGGCGAGAACACCATCCTCGCACGCGCCGGCGGCGCACCGACGCTGGCCGTGGGCATGGCGCACATCCTGC ACCAGGTGGTCGGCGGGCCCGCGATGATGGCCTTCTGGTACCACTTCGCGATCCTGTTCGAGGCGCTGTTCATCCTGACC GCGGTCGACGCCGGCACGCGCGCCGGGCGCTTCATGCTGCAGGACCTGCTGGGCAACTTCATCCCGGCGATGAAGCGCAC CGACTCGCTGCCCGCCAACCTGATCGCCACCGGCCTGTGCGTGGCGACCTGGGGCTACTTCCTGTACGCCGGCGTGGTGG ATCCGCTGGGCGGCATCAACACGCTGTGGCCGCTGTTCGGCATCTCCAACCAGATGCTGGCCGCCGTGGCGCTGACGCTG GGCACCGTGGTGCTGTTCAAGATGAAGCGCCAGCGCTACGCCTGGGTCACCATCGTGCCGGCGGCGTGGCTGCTGATCTG CACGCTGACCGCCGGCTGGCTGAAGCTGTTCTCGCCGGATCCGAAGGTCGGCTTCCTGGCCCACGCGCAGAAGTTCGGCG ACGCGCTGGCGCAGGGGACGGTGCTGGCGCCGGCCAAGTCGCTCGACGCGATGCGCCACATCGTGGTCAACGACTACATC AACGCCAGCTTGTGCGTGCTGTTCATGCTGGTCGTCGTGAGCACGGTGTTCTATGCGGTCAAGTCGATCTTGAAGGCGCT GGGCAACCAGTCGCCGACCGTGCGCGAAACGCCGTTCGAACCGATGCCGCAAGGCGCCGGCGGCTGA
Upstream 100 bases:
>100_bases CTTGTTTCAGGATGCACCGCTGCGGACACTGACGCCCATTCCAGTGCATCCGGGTCGGACGACCACGGGGGCACGGCCCC TCAGTGTTCAGGAGACCCCC
Downstream 100 bases:
>100_bases ACGCTCGCTCTGCTTCCACAGCGCCCGCCCCATGGCCTCCGGCAGCTTCACCGGCTTGTTGCAAGACGTCGAGAAGGCGG GCCGCTACCTCGGCCAAGCC
Product: putative carbon starvation A transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MTHLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKVLGLDPNRQTPAHRHNDGLDY VPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWLLAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPG VITLFGAFMIMIIILAVLALIVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPTLQMPALTQFAQGNGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHARFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALI GTTPEAVAQTLSTWGFVITPDVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGINTLWPLFGISNQMLAAVALTL GTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPDPKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYI NASLCVLFMLVVVSTVFYAVKSILKALGNQSPTVRETPFEPMPQGAGG
Sequences:
>Translated_688_residues MTHLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKVLGLDPNRQTPAHRHNDGLDY VPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWLLAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPG VITLFGAFMIMIIILAVLALIVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPTLQMPALTQFAQGNGPV WSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHARFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALI GTTPEAVAQTLSTWGFVITPDVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGINTLWPLFGISNQMLAAVALTL GTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPDPKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYI NASLCVLFMLVVVSTVFYAVKSILKALGNQSPTVRETPFEPMPQGAGG >Mature_687_residues THLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKVLGLDPNRQTPAHRHNDGLDYV PTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWLLAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPGV ITLFGAFMIMIIILAVLALIVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVHE HAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPTLQMPALTQFAQGNGPVW SGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHARFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALIG TTPEAVAQTLSTWGFVITPDVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILTA VDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGINTLWPLFGISNQMLAAVALTLG TVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPDPKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYIN ASLCVLFMLVVVSTVFYAVKSILKALGNQSPTVRETPFEPMPQGAGG
Specific function: Peptide utilization during carbon starvation [H]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=691, Percent_Identity=69.753979739508, Blast_Score=967, Evalue=0.0, Organism=Escherichia coli, GI87082431, Length=704, Percent_Identity=64.9147727272727, Blast_Score=908, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 73595; Mature: 73464
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLDPNRQTPAHRHNDGLDYVPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWL HCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPGVITLFGAFMIMIIILAVLAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAPTLQMPALTQFAQGNGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHA HHCCCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHH RFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALIGTTPEAVAQTLSTWGFVITP HEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHCCCEECH DVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGIN HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TLWPLFGISNQMLAAVALTLGTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPD HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCC PKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYINASLCVLFMLVVVSTVFYAV CCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KSILKALGNQSPTVRETPFEPMPQGAGG HHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure THLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLDPNRQTPAHRHNDGLDYVPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWL HCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPGVITLFGAFMIMIIILAVLAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAPTLQMPALTQFAQGNGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHA HHCCCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHH RFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALIGTTPEAVAQTLSTWGFVITP HEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHCCCEECH DVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGIN HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TLWPLFGISNQMLAAVALTLGTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPD HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCC PKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYINASLCVLFMLVVVSTVFYAV CCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH KSILKALGNQSPTVRETPFEPMPQGAGG HHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1848300; 9278503; 2521622 [H]