Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is cstA [H]

Identifier: 124266218

GI number: 124266218

Start: 1094611

End: 1096677

Strand: Reverse

Name: cstA [H]

Synonym: Mpe_A1025

Alternate gene names: 124266218

Gene position: 1096677-1094611 (Counterclockwise)

Preceding gene: 124266219

Following gene: 124266217

Centisome position: 27.12

GC content: 67.59

Gene sequence:

>2067_bases
ATGACCCATCTACGCAAGCACCTTCCCTGGGTGCTCGTCGCCATCGTCGGCGCGTTCGCGCTGGCGACCATCGCGCTGCA
GCGCGGTGAAGCCATCAGCGCCCTGTGGGTGGTGGTGGCCGCCCTGTGCGTCTACCTCATCGCCTACCGCTACTACAGCC
TGTTCCTGGCGACCAAGGTGCTGGGTCTCGATCCGAACCGGCAGACGCCGGCACACCGCCACAACGATGGCCTGGACTAC
GTGCCGACCAACAAGTACGTGCTCTACGGCCACCACTTCGCCGCGATCGCGGGCGCCGGTCCGCTGGTCGGCCCGGTACT
GGCCGCACAGATGGGCTACCTGCCGGGCATGCTGTGGCTGCTGGCCGGCGTGGTGTTCGCCGGCGCGGTGCAGGACTTCA
TCGTGCTGTTCATCTCCACGCGGCGCGACGGCCGTTCGCTCGGCGAGCTGGTGAAGCAGGAGATGGGCACGGTGCCGGGC
GTCATCACGCTGTTCGGCGCCTTCATGATCATGATCATCATCCTGGCGGTGCTGGCGCTGATCGTCGTCAAGGCGCTGGC
GCACTCGCCGTGGGGTGCGGTCACCGTGGGCCTGACGATCCCGGTCGCGCTGTTCATGGGCATCTACAGCCGCTACCTGC
GGCCAGGGCGCATCGGCGAGGTCTCGGCGATCGGCTTCGTGCTGCTGATGGCGGCCATCTGGCTGGGCGGCTGGGTGCAC
GAGCATGCGGCCCTGTCCGCGCTGTTCGACTTCGACGGCAAGGCTCTCACCTGGATGCTGATCGGCTACGGCTTCATCGC
CTCGGTCTTGCCGGTGTGGCTGCTGCTGGCGCCGCGCGACTACCTGTCGACCTTCCTGAAGATCGGCACCATCATCGCGC
TGGCGATCGGCATCCTGATCGTCGCACCGACGCTGCAGATGCCGGCACTGACCCAGTTCGCGCAGGGCAACGGCCCGGTG
TGGTCGGGCAACCTGTTCCCCTTCCTGTTCATCACCATCGCCTGCGGCGCGGTGTCGGGCTTCCATGCGCTGATCTCGTC
GGGCACCACGCCCAAGATGCTGGAGAACGAGACGCACGCGCGCTTCATCGGCTACGGCGGCATGCTGGCCGAGTCCTTCG
TCGCGATCATGGCGCTGGTGGCGGCCTCGGTGATCCAGCCGGGCATCTACTTCGCGATGAACAGCCCGGCCGCGCTGATC
GGCACGACGCCGGAGGCGGTGGCGCAGACCCTGTCGACCTGGGGCTTCGTGATCACGCCCGACGTGCTGATCCAGACCGC
CAAGGACGTGGGCGAGAACACCATCCTCGCACGCGCCGGCGGCGCACCGACGCTGGCCGTGGGCATGGCGCACATCCTGC
ACCAGGTGGTCGGCGGGCCCGCGATGATGGCCTTCTGGTACCACTTCGCGATCCTGTTCGAGGCGCTGTTCATCCTGACC
GCGGTCGACGCCGGCACGCGCGCCGGGCGCTTCATGCTGCAGGACCTGCTGGGCAACTTCATCCCGGCGATGAAGCGCAC
CGACTCGCTGCCCGCCAACCTGATCGCCACCGGCCTGTGCGTGGCGACCTGGGGCTACTTCCTGTACGCCGGCGTGGTGG
ATCCGCTGGGCGGCATCAACACGCTGTGGCCGCTGTTCGGCATCTCCAACCAGATGCTGGCCGCCGTGGCGCTGACGCTG
GGCACCGTGGTGCTGTTCAAGATGAAGCGCCAGCGCTACGCCTGGGTCACCATCGTGCCGGCGGCGTGGCTGCTGATCTG
CACGCTGACCGCCGGCTGGCTGAAGCTGTTCTCGCCGGATCCGAAGGTCGGCTTCCTGGCCCACGCGCAGAAGTTCGGCG
ACGCGCTGGCGCAGGGGACGGTGCTGGCGCCGGCCAAGTCGCTCGACGCGATGCGCCACATCGTGGTCAACGACTACATC
AACGCCAGCTTGTGCGTGCTGTTCATGCTGGTCGTCGTGAGCACGGTGTTCTATGCGGTCAAGTCGATCTTGAAGGCGCT
GGGCAACCAGTCGCCGACCGTGCGCGAAACGCCGTTCGAACCGATGCCGCAAGGCGCCGGCGGCTGA

Upstream 100 bases:

>100_bases
CTTGTTTCAGGATGCACCGCTGCGGACACTGACGCCCATTCCAGTGCATCCGGGTCGGACGACCACGGGGGCACGGCCCC
TCAGTGTTCAGGAGACCCCC

Downstream 100 bases:

>100_bases
ACGCTCGCTCTGCTTCCACAGCGCCCGCCCCATGGCCTCCGGCAGCTTCACCGGCTTGTTGCAAGACGTCGAGAAGGCGG
GCCGCTACCTCGGCCAAGCC

Product: putative carbon starvation A transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 687

Protein sequence:

>688_residues
MTHLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKVLGLDPNRQTPAHRHNDGLDY
VPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWLLAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPG
VITLFGAFMIMIIILAVLALIVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH
EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPTLQMPALTQFAQGNGPV
WSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHARFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALI
GTTPEAVAQTLSTWGFVITPDVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT
AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGINTLWPLFGISNQMLAAVALTL
GTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPDPKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYI
NASLCVLFMLVVVSTVFYAVKSILKALGNQSPTVRETPFEPMPQGAGG

Sequences:

>Translated_688_residues
MTHLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKVLGLDPNRQTPAHRHNDGLDY
VPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWLLAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPG
VITLFGAFMIMIIILAVLALIVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH
EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPTLQMPALTQFAQGNGPV
WSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHARFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALI
GTTPEAVAQTLSTWGFVITPDVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT
AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGINTLWPLFGISNQMLAAVALTL
GTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPDPKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYI
NASLCVLFMLVVVSTVFYAVKSILKALGNQSPTVRETPFEPMPQGAGG
>Mature_687_residues
THLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKVLGLDPNRQTPAHRHNDGLDYV
PTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWLLAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPGV
ITLFGAFMIMIIILAVLALIVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVHE
HAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILIVAPTLQMPALTQFAQGNGPVW
SGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHARFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALIG
TTPEAVAQTLSTWGFVITPDVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILTA
VDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGINTLWPLFGISNQMLAAVALTLG
TVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPDPKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYIN
ASLCVLFMLVVVSTVFYAVKSILKALGNQSPTVRETPFEPMPQGAGG

Specific function: Peptide utilization during carbon starvation [H]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=691, Percent_Identity=69.753979739508, Blast_Score=967, Evalue=0.0,
Organism=Escherichia coli, GI87082431, Length=704, Percent_Identity=64.9147727272727, Blast_Score=908, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 73595; Mature: 73464

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDPNRQTPAHRHNDGLDYVPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWL
HCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPGVITLFGAFMIMIIILAVLAL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VAPTLQMPALTQFAQGNGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHA
HHCCCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHH
RFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALIGTTPEAVAQTLSTWGFVITP
HEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHCCCEECH
DVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGIN
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TLWPLFGISNQMLAAVALTLGTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCC
PKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYINASLCVLFMLVVVSTVFYAV
CCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KSILKALGNQSPTVRETPFEPMPQGAGG
HHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
THLRKHLPWVLVAIVGAFALATIALQRGEAISALWVVVAALCVYLIAYRYYSLFLATKV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDPNRQTPAHRHNDGLDYVPTNKYVLYGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWL
HCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LAGVVFAGAVQDFIVLFISTRRDGRSLGELVKQEMGTVPGVITLFGAFMIMIIILAVLAL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IVVKALAHSPWGAVTVGLTIPVALFMGIYSRYLRPGRIGEVSAIGFVLLMAAIWLGGWVH
HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EHAALSALFDFDGKALTWMLIGYGFIASVLPVWLLLAPRDYLSTFLKIGTIIALAIGILI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VAPTLQMPALTQFAQGNGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLENETHA
HHCCCCCHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHH
RFIGYGGMLAESFVAIMALVAASVIQPGIYFAMNSPAALIGTTPEAVAQTLSTWGFVITP
HEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHCCCEECH
DVLIQTAKDVGENTILARAGGAPTLAVGMAHILHQVVGGPAMMAFWYHFAILFEALFILT
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AVDAGTRAGRFMLQDLLGNFIPAMKRTDSLPANLIATGLCVATWGYFLYAGVVDPLGGIN
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TLWPLFGISNQMLAAVALTLGTVVLFKMKRQRYAWVTIVPAAWLLICTLTAGWLKLFSPD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCC
PKVGFLAHAQKFGDALAQGTVLAPAKSLDAMRHIVVNDYINASLCVLFMLVVVSTVFYAV
CCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KSILKALGNQSPTVRETPFEPMPQGAGG
HHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848300; 9278503; 2521622 [H]