| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124266172
Identifier: 124266172
GI number: 124266172
Start: 1042173
End: 1043249
Strand: Direct
Name: 124266172
Synonym: Mpe_A0979
Alternate gene names: NA
Gene position: 1042173-1043249 (Clockwise)
Preceding gene: 124266169
Following gene: 124266173
Centisome position: 25.77
GC content: 69.82
Gene sequence:
>1077_bases ATGAGCCAGCCTGTCGCCATCGTGCCGCCCGAGGCGGTGACCCCTGCGTGGATCACGGCCGCGTTGGCCGCCGGGGGCGT GAACGCCCGGGTCGCCGGACTGGTGATGGAGTCGGTGGGCACCGGACAGCTCGGCGAGACCCGGCGCTTCCACCTCGAGT ACGCCGGCACGCCGCCGCCCGACGCGCCGAAGTCGGTGGTCGGCAAGTTCCCGTCCGCCAATGCCACGGCGGCGGAGACC GGGCGGTCGATGGGCTTCTACCGCTCGGAGGTCATGTTCTACCGGGAGGCGGCCGCGAAGGCCGGCATCCACGTGCCGCG GACCTACGTCGCGGAGATCGATGCCGCCAACGATTTCGTGCTGCTGTTCGAGGACCTGGCGCCGGCCCGGCCCGGTGACC AGATGCGCGGCTGCAGCGTCGACGAGGCGCGCCGCGCGCTGTCGGAGGCGGCCCGGCTCCACGCGGCCTACTGGAACGAC CTCGAGCTGATGAAGCAGCCCTGGCTCTACGTGCCCGAAGGCGCGCAGGGCTTCTACACCACCGAGCTGATCGAGTCGTC GTGGGACTATTTCAAGCGCACCTACGACGGCATGCTGTCCGCCGAGGTCACCGATGTCTGCGAGCGCTACGTCCGTCACC ACGCGCACTGGAACCGGCCGCGGCCGCTGCCCAAGTGCTACTCGCACTGCGACTTTCGGCCCGACAACATGCTGTTCCAT CCCGCGGGGGGCCGGGTCGCGATCGTCGACTGGCAGACCAGCAACTTCCTCGGGACCGGCATGGACACCGCCTATTTCCT GGGGGGAGCGTTCGACCGCGAGACGCGCCGCAAGCACGAGCGCTCGCTGCTCGCCGGCTACCACGAGGCACTCTGCGCCC ACGGCGTGCAGGACTACAGCTTCGACCACGCGATGGCCGACTACCGGCACTACAGCTTCGCGGTGCTCGCGGTCGCGATC GCCGCGACGGTGATCGTCAAACGCACCGAACGGGGCGACCGCCTGTTCGCACACATGATCACCGGTGGCGCGCACCAGGC GATCGACAACCACGCGCTCGACACGCTGGGCGCCTGA
Upstream 100 bases:
>100_bases CTGCCTGTCACGCCTGGGCAAGAGCGGTGTCCGGAATGAGCCATCTTTCGGCGTGCCCGCGCCCTAAGCTGCGCCGCGAG CAACCCGGAGAGACCTGCCC
Downstream 100 bases:
>100_bases GGGACCGGCCATGCGCCTGCTCAAGCCGCACCTGGACATCGGCCTGTTCACCAACCAGATCGCGCAGCAGCGCAGCTTCT GGTCGGACACCGTGGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Conserved Domain Protein; Protein Kinase-Like Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSQPVAIVPPEAVTPAWITAALAAGGVNARVAGLVMESVGTGQLGETRRFHLEYAGTPPPDAPKSVVGKFPSANATAAET GRSMGFYRSEVMFYREAAAKAGIHVPRTYVAEIDAANDFVLLFEDLAPARPGDQMRGCSVDEARRALSEAARLHAAYWND LELMKQPWLYVPEGAQGFYTTELIESSWDYFKRTYDGMLSAEVTDVCERYVRHHAHWNRPRPLPKCYSHCDFRPDNMLFH PAGGRVAIVDWQTSNFLGTGMDTAYFLGGAFDRETRRKHERSLLAGYHEALCAHGVQDYSFDHAMADYRHYSFAVLAVAI AATVIVKRTERGDRLFAHMITGGAHQAIDNHALDTLGA
Sequences:
>Translated_358_residues MSQPVAIVPPEAVTPAWITAALAAGGVNARVAGLVMESVGTGQLGETRRFHLEYAGTPPPDAPKSVVGKFPSANATAAET GRSMGFYRSEVMFYREAAAKAGIHVPRTYVAEIDAANDFVLLFEDLAPARPGDQMRGCSVDEARRALSEAARLHAAYWND LELMKQPWLYVPEGAQGFYTTELIESSWDYFKRTYDGMLSAEVTDVCERYVRHHAHWNRPRPLPKCYSHCDFRPDNMLFH PAGGRVAIVDWQTSNFLGTGMDTAYFLGGAFDRETRRKHERSLLAGYHEALCAHGVQDYSFDHAMADYRHYSFAVLAVAI AATVIVKRTERGDRLFAHMITGGAHQAIDNHALDTLGA >Mature_357_residues SQPVAIVPPEAVTPAWITAALAAGGVNARVAGLVMESVGTGQLGETRRFHLEYAGTPPPDAPKSVVGKFPSANATAAETG RSMGFYRSEVMFYREAAAKAGIHVPRTYVAEIDAANDFVLLFEDLAPARPGDQMRGCSVDEARRALSEAARLHAAYWNDL ELMKQPWLYVPEGAQGFYTTELIESSWDYFKRTYDGMLSAEVTDVCERYVRHHAHWNRPRPLPKCYSHCDFRPDNMLFHP AGGRVAIVDWQTSNFLGTGMDTAYFLGGAFDRETRRKHERSLLAGYHEALCAHGVQDYSFDHAMADYRHYSFAVLAVAIA ATVIVKRTERGDRLFAHMITGGAHQAIDNHALDTLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39556; Mature: 39425
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPVAIVPPEAVTPAWITAALAAGGVNARVAGLVMESVGTGQLGETRRFHLEYAGTPPP CCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC DAPKSVVGKFPSANATAAETGRSMGFYRSEVMFYREAAAKAGIHVPRTYVAEIDAANDFV CCCHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCEE LLFEDLAPARPGDQMRGCSVDEARRALSEAARLHAAYWNDLELMKQPWLYVPEGAQGFYT EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCCHH TELIESSWDYFKRTYDGMLSAEVTDVCERYVRHHAHWNRPRPLPKCYSHCDFRPDNMLFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEE PAGGRVAIVDWQTSNFLGTGMDTAYFLGGAFDRETRRKHERSLLAGYHEALCAHGVQDYS CCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC FDHAMADYRHYSFAVLAVAIAATVIVKRTERGDRLFAHMITGGAHQAIDNHALDTLGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SQPVAIVPPEAVTPAWITAALAAGGVNARVAGLVMESVGTGQLGETRRFHLEYAGTPPP CCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC DAPKSVVGKFPSANATAAETGRSMGFYRSEVMFYREAAAKAGIHVPRTYVAEIDAANDFV CCCHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCEE LLFEDLAPARPGDQMRGCSVDEARRALSEAARLHAAYWNDLELMKQPWLYVPEGAQGFYT EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCCCCCHH TELIESSWDYFKRTYDGMLSAEVTDVCERYVRHHAHWNRPRPLPKCYSHCDFRPDNMLFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEE PAGGRVAIVDWQTSNFLGTGMDTAYFLGGAFDRETRRKHERSLLAGYHEALCAHGVQDYS CCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC FDHAMADYRHYSFAVLAVAIAATVIVKRTERGDRLFAHMITGGAHQAIDNHALDTLGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA