| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is ttuD [H]
Identifier: 124266169
GI number: 124266169
Start: 1039052
End: 1040341
Strand: Direct
Name: ttuD [H]
Synonym: Mpe_A0976
Alternate gene names: 124266169
Gene position: 1039052-1040341 (Clockwise)
Preceding gene: 124266168
Following gene: 124266172
Centisome position: 25.69
GC content: 73.72
Gene sequence:
>1290_bases GTGACCGCCGCCACCGCGATAGATCGCCGGCCGCTGCTGCGCGCGCTGTTCGACGCGGCCGTGGCTGCGGCGCAGCCGGC GCTGTGCCTGCCGGCCCATCTGCCCGAGAAGCCGACGGGCCGCACCTTCGTGATCGGCGCCGGCAAGGCCTCGGCCGCGA TGGCGCGGGTGCTGGAGCAGCACTGGGACGGCCCGCTGCAGGGCCTGGTGGTCACCCGCTACGGCTATGCGGTGCCCTGC GAGCGCATCGAGATCGTCGAGGCCGCCCACCCGGTGCCCGACGCCGCCGGGCTGCGCGCGGCCGAACGCATCCGTGCGCT GGTGAGCGATCTGCGCGCCGACGACCTGGTGATCGCTCTCATCTCCGGCGGTGGCTCCTCGCTGCTGGTGGCGCCGGGCC CCGGGCTCACGCTGGCCGACAAGCAGGCCGTCAACACCGCACTGCTGGAGAGCGGCGCGACGATCTCCGAGATGAACTGC GTGCGTCGGCACCTGTCGTCGCTGAAGGGCGGGCGGCTGGCCGCCGCCTGCCACCCGGCCCGGCTAGTGAGCCTGCTGAT CTCCGACGTGCCGGGCGACAACCCGATCGACATCGCATCGGGCCCGACCGTGGCCGACCCCACCACCTGTGCCGACGCGC TGGCCATCGTGCAGCGCTACCGGATCGCGCTGCCGCCGGCGGTGCGCGCGCTGCTGGAAAGCGGCGACGGCGAGACCGTC AAGCCGCACGATCCCCGCCTGGCACGCAGCGAGACGCGCATCATCACTGCGCCGCAGATCGCGCTCGAGGCGGCGGCGCG GATCGCTCGCGACGCCGGCCTCACGCCCTACATCCTGGGCGACAGCCTCGAGGGCGAGGCACGCGAGGTCGGCAAGACCA TCGCCGGCATCGCAAGGCAGGTGGTGCTGCACGGCCAGCCGTTCCGCCCGCCCTGCGTGTTGCTGTCGGGCGGCGAGACC ACGGTCACCTTGAAAGGCCGCGGCCGCGGTGGCCGCAATGTCGAGTTCCTGCTGTCGCTTGCCATCGCGCTGGACGGCCT GCCCGGCGTGCATGCGATCGCGGGCGACACCGACGGCGTCGACGGCGTCGAGGAGATCGCCGGCGCCTGCGCCGCGCCCG ACACGCTGGTGCGTGCCTGGGCGCTCGGCCTGCGCCCGCGCGCCAGCCTCGACGACAACGACGGCCACGGCTTCTTCCAG GCGCTGGGCGACTCGATCGTCACCGGCCCGACGCTGACCAACGTGAACGACTTCCGGGCTGTGCTGATCGAGGGCCCGGC CGGCGCCTGA
Upstream 100 bases:
>100_bases GGCCTGCGCCGCCAACGGCATGGCCGACCTCGACCACTCCGCGCTGGTGCGGGCGCTGGAGCTGATGGCGGGCCACGACG TGGCCGCGGCCTGAGCGACC
Downstream 100 bases:
>100_bases ACGCGCTTCAGGTCTTCAGCCGGTAGCCGGTGCGGAAGATCCAGGCCACGACGGCCAGCGAGCCGGCGAGGAAAGCGAAG GTCATGCCCAGGCTCAGTGC
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTAATAIDRRPLLRALFDAAVAAAQPALCLPAHLPEKPTGRTFVIGAGKASAAMARVLEQHWDGPLQGLVVTRYGYAVPC ERIEIVEAAHPVPDAAGLRAAERIRALVSDLRADDLVIALISGGGSSLLVAPGPGLTLADKQAVNTALLESGATISEMNC VRRHLSSLKGGRLAAACHPARLVSLLISDVPGDNPIDIASGPTVADPTTCADALAIVQRYRIALPPAVRALLESGDGETV KPHDPRLARSETRIITAPQIALEAAARIARDAGLTPYILGDSLEGEAREVGKTIAGIARQVVLHGQPFRPPCVLLSGGET TVTLKGRGRGGRNVEFLLSLAIALDGLPGVHAIAGDTDGVDGVEEIAGACAAPDTLVRAWALGLRPRASLDDNDGHGFFQ ALGDSIVTGPTLTNVNDFRAVLIEGPAGA
Sequences:
>Translated_429_residues MTAATAIDRRPLLRALFDAAVAAAQPALCLPAHLPEKPTGRTFVIGAGKASAAMARVLEQHWDGPLQGLVVTRYGYAVPC ERIEIVEAAHPVPDAAGLRAAERIRALVSDLRADDLVIALISGGGSSLLVAPGPGLTLADKQAVNTALLESGATISEMNC VRRHLSSLKGGRLAAACHPARLVSLLISDVPGDNPIDIASGPTVADPTTCADALAIVQRYRIALPPAVRALLESGDGETV KPHDPRLARSETRIITAPQIALEAAARIARDAGLTPYILGDSLEGEAREVGKTIAGIARQVVLHGQPFRPPCVLLSGGET TVTLKGRGRGGRNVEFLLSLAIALDGLPGVHAIAGDTDGVDGVEEIAGACAAPDTLVRAWALGLRPRASLDDNDGHGFFQ ALGDSIVTGPTLTNVNDFRAVLIEGPAGA >Mature_428_residues TAATAIDRRPLLRALFDAAVAAAQPALCLPAHLPEKPTGRTFVIGAGKASAAMARVLEQHWDGPLQGLVVTRYGYAVPCE RIEIVEAAHPVPDAAGLRAAERIRALVSDLRADDLVIALISGGGSSLLVAPGPGLTLADKQAVNTALLESGATISEMNCV RRHLSSLKGGRLAAACHPARLVSLLISDVPGDNPIDIASGPTVADPTTCADALAIVQRYRIALPPAVRALLESGDGETVK PHDPRLARSETRIITAPQIALEAAARIARDAGLTPYILGDSLEGEAREVGKTIAGIARQVVLHGQPFRPPCVLLSGGETT VTLKGRGRGGRNVEFLLSLAIALDGLPGVHAIAGDTDGVDGVEEIAGACAAPDTLVRAWALGLRPRASLDDNDGHGFFQA LGDSIVTGPTLTNVNDFRAVLIEGPAGA
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=488, Percent_Identity=35.0409836065574, Blast_Score=198, Evalue=7e-51, Organism=Caenorhabditis elegans, GI193205461, Length=414, Percent_Identity=32.3671497584541, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI19920578, Length=441, Percent_Identity=28.1179138321995, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 44298; Mature: 44167
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATAIDRRPLLRALFDAAVAAAQPALCLPAHLPEKPTGRTFVIGAGKASAAMARVLEQ CCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHH HWDGPLQGLVVTRYGYAVPCERIEIVEAAHPVPDAAGLRAAERIRALVSDLRADDLVIAL HCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE ISGGGSSLLVAPGPGLTLADKQAVNTALLESGATISEMNCVRRHLSSLKGGRLAAACHPA EECCCCEEEEECCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCHH RLVSLLISDVPGDNPIDIASGPTVADPTTCADALAIVQRYRIALPPAVRALLESGDGETV HHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC KPHDPRLARSETRIITAPQIALEAAARIARDAGLTPYILGDSLEGEAREVGKTIAGIARQ CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHH VVLHGQPFRPPCVLLSGGETTVTLKGRGRGGRNVEFLLSLAIALDGLPGVHAIAGDTDGV HHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCC DGVEEIAGACAAPDTLVRAWALGLRPRASLDDNDGHGFFQALGDSIVTGPTLTNVNDFRA CHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCEEE VLIEGPAGA EEEECCCCC >Mature Secondary Structure TAATAIDRRPLLRALFDAAVAAAQPALCLPAHLPEKPTGRTFVIGAGKASAAMARVLEQ CCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHH HWDGPLQGLVVTRYGYAVPCERIEIVEAAHPVPDAAGLRAAERIRALVSDLRADDLVIAL HCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE ISGGGSSLLVAPGPGLTLADKQAVNTALLESGATISEMNCVRRHLSSLKGGRLAAACHPA EECCCCEEEEECCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCHH RLVSLLISDVPGDNPIDIASGPTVADPTTCADALAIVQRYRIALPPAVRALLESGDGETV HHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC KPHDPRLARSETRIITAPQIALEAAARIARDAGLTPYILGDSLEGEAREVGKTIAGIARQ CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHH VVLHGQPFRPPCVLLSGGETTVTLKGRGRGGRNVEFLLSLAIALDGLPGVHAIAGDTDGV HHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCC DGVEEIAGACAAPDTLVRAWALGLRPRASLDDNDGHGFFQALGDSIVTGPTLTNVNDFRA CHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCCEEE VLIEGPAGA EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]