| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is gloB [H]
Identifier: 124266127
GI number: 124266127
Start: 988437
End: 989216
Strand: Direct
Name: gloB [H]
Synonym: Mpe_A0934
Alternate gene names: 124266127
Gene position: 988437-989216 (Clockwise)
Preceding gene: 124266126
Following gene: 124266128
Centisome position: 24.44
GC content: 69.74
Gene sequence:
>780_bases GTGCCCGCCCTCGTGTCGATCAAGGCCTTTGCCGACAACTACATCTGGTTGTTTCGCGTCGGGAACCGCGCGTGGGTCGT CGACCCGGGCGAGTCGGCCGGCGTGCTCGGCTATCTGGACAAGCACCACCTGATCCTCGAAGGGATCCTGCTGACCCACC ACCACGACGACCACACGGGTGGCGTCGAACACTTGCGATCGGTGCGCAACGCCCGGGTCTACGGGCCTGCGCGCGAGCGC CTGCCCGAGCCCGTCATCCGGCTGCTGCACGGCGACGAGGTGGACGCCCTGGGCGTGCGCTTCCGCGTGATCGACGTGCC GGGGCACACCGCCGGGCACATCGCCTATTACGCCGAAGACTTCGACGGTCGTCCGCTGCTGTTCTGCGGCGACACGCTGT TCTCCGGCGGCTGCGGGCGCCTGTTCGAGGGCACGCCGGCGCAGATGTTCGCGTCGCTCGACCGGCTCGCCGGCCTGCCC GGAGACACTCTCGTGTGCTGTGCCCACGAGTACACGGTGGGCAACCTGCGGTTCGCGAACGCTGTCGAGCCCGGCAATCG CGACGTGGTGGAGCACCTCGATCGATGCCTGGCGCTGCGGGCCCGCGACGAGCCCACGCTGCCCAGTTCCATCAAGCAGG AGCGCCTGATCAACCCCTTCCTGCGCTGCCAGGACCCGGCGGTGGCGAACGCGGCGCGGCGCCGGGCCGCGGTCGGCCAT GCGATGGACGACGTGGCGGTGTTCGCTGCGTTGAGGGCCTGGAAGGACCGCTTCGCATGA
Upstream 100 bases:
>100_bases AGGCCCGGGCCGGAGGTCCGGGAACGATGCGTCGCGCGTCCGACCTCGATCAGGTCCCGCGCGGCTCGGTGAGTTTGCTC AGCGCTGCCAGGAGAGGAAC
Downstream 100 bases:
>100_bases GGCCTCGACCATGGCGATGAGGGTGTCCTTCTTCCGCGCGCGCCGGGACGCACCGCAGGAACCTGACGAGAAGGGCGCCG AGGTGGCACGGTTGCACTGG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPALVSIKAFADNYIWLFRVGNRAWVVDPGESAGVLGYLDKHHLILEGILLTHHHDDHTGGVEHLRSVRNARVYGPARER LPEPVIRLLHGDEVDALGVRFRVIDVPGHTAGHIAYYAEDFDGRPLLFCGDTLFSGGCGRLFEGTPAQMFASLDRLAGLP GDTLVCCAHEYTVGNLRFANAVEPGNRDVVEHLDRCLALRARDEPTLPSSIKQERLINPFLRCQDPAVANAARRRAAVGH AMDDVAVFAALRAWKDRFA
Sequences:
>Translated_259_residues MPALVSIKAFADNYIWLFRVGNRAWVVDPGESAGVLGYLDKHHLILEGILLTHHHDDHTGGVEHLRSVRNARVYGPARER LPEPVIRLLHGDEVDALGVRFRVIDVPGHTAGHIAYYAEDFDGRPLLFCGDTLFSGGCGRLFEGTPAQMFASLDRLAGLP GDTLVCCAHEYTVGNLRFANAVEPGNRDVVEHLDRCLALRARDEPTLPSSIKQERLINPFLRCQDPAVANAARRRAAVGH AMDDVAVFAALRAWKDRFA >Mature_258_residues PALVSIKAFADNYIWLFRVGNRAWVVDPGESAGVLGYLDKHHLILEGILLTHHHDDHTGGVEHLRSVRNARVYGPARERL PEPVIRLLHGDEVDALGVRFRVIDVPGHTAGHIAYYAEDFDGRPLLFCGDTLFSGGCGRLFEGTPAQMFASLDRLAGLPG DTLVCCAHEYTVGNLRFANAVEPGNRDVVEHLDRCLALRARDEPTLPSSIKQERLINPFLRCQDPAVANAARRRAAVGHA MDDVAVFAALRAWKDRFA
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=258, Percent_Identity=36.046511627907, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI94538322, Length=258, Percent_Identity=36.046511627907, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI14150041, Length=226, Percent_Identity=38.0530973451327, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI116642887, Length=233, Percent_Identity=38.1974248927039, Blast_Score=141, Evalue=6e-34, Organism=Homo sapiens, GI21703352, Length=233, Percent_Identity=38.1974248927039, Blast_Score=141, Evalue=7e-34, Organism=Homo sapiens, GI46361987, Length=192, Percent_Identity=37.5, Blast_Score=117, Evalue=9e-27, Organism=Escherichia coli, GI1786406, Length=257, Percent_Identity=44.3579766536965, Blast_Score=197, Evalue=6e-52, Organism=Escherichia coli, GI1787158, Length=205, Percent_Identity=30.7317073170732, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536925, Length=267, Percent_Identity=34.0823970037453, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320478, Length=272, Percent_Identity=31.6176470588235, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6324614, Length=252, Percent_Identity=30.1587301587302, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI21356335, Length=257, Percent_Identity=38.1322957198444, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI24667703, Length=259, Percent_Identity=37.8378378378378, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24667711, Length=259, Percent_Identity=37.8378378378378, Blast_Score=166, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28587; Mature: 28456
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALVSIKAFADNYIWLFRVGNRAWVVDPGESAGVLGYLDKHHLILEGILLTHHHDDHTG CCCEEEEEECCCCEEEEEEECCEEEEECCCCCCCEEEECCCCHHHHHEEEEEECCCCCCC GVEHLRSVRNARVYGPARERLPEPVIRLLHGDEVDALGVRFRVIDVPGHTAGHIAYYAED HHHHHHHHHHCEEECCHHHHCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEEEEEC FDGRPLLFCGDTLFSGGCGRLFEGTPAQMFASLDRLAGLPGDTLVCCAHEYTVGNLRFAN CCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEC AVEPGNRDVVEHLDRCLALRARDEPTLPSSIKQERLINPFLRCQDPAVANAARRRAAVGH CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHH AMDDVAVFAALRAWKDRFA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PALVSIKAFADNYIWLFRVGNRAWVVDPGESAGVLGYLDKHHLILEGILLTHHHDDHTG CCEEEEEECCCCEEEEEEECCEEEEECCCCCCCEEEECCCCHHHHHEEEEEECCCCCCC GVEHLRSVRNARVYGPARERLPEPVIRLLHGDEVDALGVRFRVIDVPGHTAGHIAYYAED HHHHHHHHHHCEEECCHHHHCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCEEEEEEEC FDGRPLLFCGDTLFSGGCGRLFEGTPAQMFASLDRLAGLPGDTLVCCAHEYTVGNLRFAN CCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEC AVEPGNRDVVEHLDRCLALRARDEPTLPSSIKQERLINPFLRCQDPAVANAARRRAAVGH CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHH AMDDVAVFAALRAWKDRFA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA