| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124266105
Identifier: 124266105
GI number: 124266105
Start: 968111
End: 968719
Strand: Direct
Name: 124266105
Synonym: Mpe_A0912
Alternate gene names: NA
Gene position: 968111-968719 (Clockwise)
Preceding gene: 124266104
Following gene: 124266107
Centisome position: 23.94
GC content: 71.26
Gene sequence:
>609_bases ATGCGATCGCCTGAACTGTCGTGGTGCGGCCTCGTCGTCGCGTGCTGTCTGGCAGGTTGCGCGGTCCCGGCTGCCGCGCC GAACGCGGCGGCGCCTTCGCCGCACGGCCATGCGATCTCGGAGCAGGAACTGCAGGCCTGGAACATCGACGTGCGCGGCC CCGACGGCGCGGGGCTGCCGCCGGGGTCGGGTTCGGTCGCGGCGGGCAAGGCGGTGTTCGACGCCAAGTGCGCCGCCTGC CATGGCGCCGCCGCAGCCGGTGGGCCGGTGTTCGGGCCCATGGTCGGTGGCATCGGCTCCTTCAAGACCGATCGCCGCGT ACTCACGCCGGGCAGCATGTATCCGTATGCGCCGATCCTGTTCGACTACGTGCGGCGTGCGATGCCGATGAACGCGCCGC AGTCGCTGACGAACGACGAGACCTACGCGGTCAGCGGCTATCTGCTGCACCTCAACGGGCTGGTGCCGGCCGATGCGGTG ATGAGCGCACAGACGTTGGCTGCGGTGCGCATGCCCAACCGCGACGGCTTCCTGGTCGACGATCGGCCCGACACCCGGGC CACGCGGTGCATGCGCGACTGCCCGCCGATCTCGAGCGCGGCGCGCTGA
Upstream 100 bases:
>100_bases ACCGTGGAAGAGATCAAGAAGGTCCGCGCGATCACCGGCTTCGTGCAGCACCACAACGGCATCTTCCCGTGGTCCATCGA TGCCGCCGGGGAGGTGAAGA
Downstream 100 bases:
>100_bases ACGGCGGCTGCCGGGCGCCGCGGGACCGCGGCGTCAGGCGGCCAGCGCCCGCAGCGCCATCGAGTTGAAGCGCTCGGCGA TCTGCCGCGGCCCGACGCGG
Product: putative sulfite oxidase cytochrome subunit
Products: NA
Alternate protein names: Sulfite Oxidase Cytochrome Subunit; Diheme Cytochrome C SoxD; Cytochrome; Cytochrome C; Cytochrome C Subfamily; Cytochrome C-Type; Sulfite Oxidase Cytochrome Subunit SoxD; C-Type Cytochrome; Mo-Co Oxidoreductase Dimerization Domain Protein; Sulfite Oxidase Cytochrome C Subunit SoxD; Sulfur Oxidation Protein SoxCD Diheme Cytochrome C Subunit; Cytochrome C Region Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MRSPELSWCGLVVACCLAGCAVPAAAPNAAAPSPHGHAISEQELQAWNIDVRGPDGAGLPPGSGSVAAGKAVFDAKCAAC HGAAAAGGPVFGPMVGGIGSFKTDRRVLTPGSMYPYAPILFDYVRRAMPMNAPQSLTNDETYAVSGYLLHLNGLVPADAV MSAQTLAAVRMPNRDGFLVDDRPDTRATRCMRDCPPISSAAR
Sequences:
>Translated_202_residues MRSPELSWCGLVVACCLAGCAVPAAAPNAAAPSPHGHAISEQELQAWNIDVRGPDGAGLPPGSGSVAAGKAVFDAKCAAC HGAAAAGGPVFGPMVGGIGSFKTDRRVLTPGSMYPYAPILFDYVRRAMPMNAPQSLTNDETYAVSGYLLHLNGLVPADAV MSAQTLAAVRMPNRDGFLVDDRPDTRATRCMRDCPPISSAAR >Mature_202_residues MRSPELSWCGLVVACCLAGCAVPAAAPNAAAPSPHGHAISEQELQAWNIDVRGPDGAGLPPGSGSVAAGKAVFDAKCAAC HGAAAAGGPVFGPMVGGIGSFKTDRRVLTPGSMYPYAPILFDYVRRAMPMNAPQSLTNDETYAVSGYLLHLNGLVPADAV MSAQTLAAVRMPNRDGFLVDDRPDTRATRCMRDCPPISSAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20852; Mature: 20852
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPELSWCGLVVACCLAGCAVPAAAPNAAAPSPHGHAISEQELQAWNIDVRGPDGAGLP CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCC PGSGSVAAGKAVFDAKCAACHGAAAAGGPVFGPMVGGIGSFKTDRRVLTPGSMYPYAPIL CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHH FDYVRRAMPMNAPQSLTNDETYAVSGYLLHLNGLVPADAVMSAQTLAAVRMPNRDGFLVD HHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEC DRPDTRATRCMRDCPPISSAAR CCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSPELSWCGLVVACCLAGCAVPAAAPNAAAPSPHGHAISEQELQAWNIDVRGPDGAGLP CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCC PGSGSVAAGKAVFDAKCAACHGAAAAGGPVFGPMVGGIGSFKTDRRVLTPGSMYPYAPIL CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEECCCCCCCHHHHH FDYVRRAMPMNAPQSLTNDETYAVSGYLLHLNGLVPADAVMSAQTLAAVRMPNRDGFLVD HHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEC DRPDTRATRCMRDCPPISSAAR CCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA