| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is zraS [H]
Identifier: 124266107
GI number: 124266107
Start: 969529
End: 970560
Strand: Direct
Name: zraS [H]
Synonym: Mpe_A0914
Alternate gene names: 124266107
Gene position: 969529-970560 (Clockwise)
Preceding gene: 124266105
Following gene: 124266108
Centisome position: 23.97
GC content: 70.16
Gene sequence:
>1032_bases ATGAGAGCCCAGCGCCATACGTACGATCTTGCCGAGGTGTTCGAACAGATCTTCTCGGCCGCGCCGTGGCCGATGCTGAT GCTGGGTGAGGACGCCGCGGTGCTGGGTGCGAGCGACGAATACGGCCACGGTGAGGCCGACTCCGACCTGCCGCTGCGCG CGCGTGCGCCGCACTACCTGGCGTCGTTGCGCGGCGGCCCGCCGTGGTCGGCCGCGCAGGAGGCCGACAGCGTGCGGACG CTGCCCTCGGGGGCGCAGGTGCACGAGCGGCTCTTCCTGCGCCGCACGCCCTGGGGGGCCAGCCTCGTGATCGTCGACCA GACCGACCTGCGCCAGCTCCAGACCTCCGACCTGCAGACGGCACGGCTCGCGGCGCTGGGCTTCATGGTGGCGGGCGTCT GCCACGAGATCACGAACCCGCTCACCTCGCTGCACTCCATCGTGCAGATCCTGCGGTCCGAGAAGCAGCCGAGCCCGGCG CTGCTGGACAAGGGCTTCGACAACATCGCGGTCAACGTCAAGCGCATCCTCGACATCTCGCGGCGGCTGGTGAAGTTCTC GCGCGTCGGTGACGAGCCGCGCTACGGCTTCGCGGTCGACGAGGCCATCGAGGAGGCGCTCTACGTGCTGCGCCAGGACG ACCTGCTGCGCGACGTGGAGCTGCAGTACCTGCGCCGCGACGCGGGCCTGAAGGTGTTCGGCAACACGGGGCAGATCCGC GAGATCTTCCTGAACCTGTTCGTCAATGCCGCTCAGGCGATGGCCGGCCGCGGCACGCTGCGCATCGAGACCCGCGAGGC CGGCCCGATGGTCGAAGTGCTGGTCGGTGACACCGGCCCGGGCGTGCCGGCCGAGGCCGTGGGCCGCATCTTCGAACCCT TCTTCACCACCAAGTCCAGCATGCACGGCACCGGGCTCGGGCTGGCGATCAGCACCGAGATCGCCCACGAGCACGGCGGC AGCCTCTCGCTGCGACACACCGGCAGCGAGGGCGCCACGTTCTGCGTCGCGCTGCCCAGGGAACGCGCATGA
Upstream 100 bases:
>100_bases GCCGATCGGTGCGTGGGGGTCGCTCTCTATTGCTGCGTGCACTGCGTGCCCATACGCTCTGTTCTGCCCCCGCCATCATC TGTTCCATTGACCGATACCG
Downstream 100 bases:
>100_bases GCAGCCAGCCCCGCAGGGAAGCACCGGCCGAGGCACGGCGGCCGTCGGAACAGGTGCTCGTGATCGACGACGACCACGGC ATCGGCGACTGCGTCGAGAT
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MRAQRHTYDLAEVFEQIFSAAPWPMLMLGEDAAVLGASDEYGHGEADSDLPLRARAPHYLASLRGGPPWSAAQEADSVRT LPSGAQVHERLFLRRTPWGASLVIVDQTDLRQLQTSDLQTARLAALGFMVAGVCHEITNPLTSLHSIVQILRSEKQPSPA LLDKGFDNIAVNVKRILDISRRLVKFSRVGDEPRYGFAVDEAIEEALYVLRQDDLLRDVELQYLRRDAGLKVFGNTGQIR EIFLNLFVNAAQAMAGRGTLRIETREAGPMVEVLVGDTGPGVPAEAVGRIFEPFFTTKSSMHGTGLGLAISTEIAHEHGG SLSLRHTGSEGATFCVALPRERA
Sequences:
>Translated_343_residues MRAQRHTYDLAEVFEQIFSAAPWPMLMLGEDAAVLGASDEYGHGEADSDLPLRARAPHYLASLRGGPPWSAAQEADSVRT LPSGAQVHERLFLRRTPWGASLVIVDQTDLRQLQTSDLQTARLAALGFMVAGVCHEITNPLTSLHSIVQILRSEKQPSPA LLDKGFDNIAVNVKRILDISRRLVKFSRVGDEPRYGFAVDEAIEEALYVLRQDDLLRDVELQYLRRDAGLKVFGNTGQIR EIFLNLFVNAAQAMAGRGTLRIETREAGPMVEVLVGDTGPGVPAEAVGRIFEPFFTTKSSMHGTGLGLAISTEIAHEHGG SLSLRHTGSEGATFCVALPRERA >Mature_343_residues MRAQRHTYDLAEVFEQIFSAAPWPMLMLGEDAAVLGASDEYGHGEADSDLPLRARAPHYLASLRGGPPWSAAQEADSVRT LPSGAQVHERLFLRRTPWGASLVIVDQTDLRQLQTSDLQTARLAALGFMVAGVCHEITNPLTSLHSIVQILRSEKQPSPA LLDKGFDNIAVNVKRILDISRRLVKFSRVGDEPRYGFAVDEAIEEALYVLRQDDLLRDVELQYLRRDAGLKVFGNTGQIR EIFLNLFVNAAQAMAGRGTLRIETREAGPMVEVLVGDTGPGVPAEAVGRIFEPFFTTKSSMHGTGLGLAISTEIAHEHGG SLSLRHTGSEGATFCVALPRERA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=242, Percent_Identity=31.404958677686, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=29.5652173913043, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI87081816, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI145693157, Length=280, Percent_Identity=25.3571428571429, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786600, Length=215, Percent_Identity=25.1162790697674, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788393, Length=130, Percent_Identity=31.5384615384615, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1790300, Length=263, Percent_Identity=28.8973384030418, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789149, Length=223, Percent_Identity=24.6636771300448, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 37490; Mature: 37490
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAQRHTYDLAEVFEQIFSAAPWPMLMLGEDAAVLGASDEYGHGEADSDLPLRARAPHYL CCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHH ASLRGGPPWSAAQEADSVRTLPSGAQVHERLFLRRTPWGASLVIVDQTDLRQLQTSDLQT HHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEECCHHHHHHHHCCHHH ARLAALGFMVAGVCHEITNPLTSLHSIVQILRSEKQPSPALLDKGFDNIAVNVKRILDIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH RRLVKFSRVGDEPRYGFAVDEAIEEALYVLRQDDLLRDVELQYLRRDAGLKVFGNTGQIR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHH EIFLNLFVNAAQAMAGRGTLRIETREAGPMVEVLVGDTGPGVPAEAVGRIFEPFFTTKSS HHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC MHGTGLGLAISTEIAHEHGGSLSLRHTGSEGATFCVALPRERA CCCCCCEEEEEHHHHHHCCCEEEEEECCCCCCEEEEECCCCCC >Mature Secondary Structure MRAQRHTYDLAEVFEQIFSAAPWPMLMLGEDAAVLGASDEYGHGEADSDLPLRARAPHYL CCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHH ASLRGGPPWSAAQEADSVRTLPSGAQVHERLFLRRTPWGASLVIVDQTDLRQLQTSDLQT HHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEECCHHHHHHHHCCHHH ARLAALGFMVAGVCHEITNPLTSLHSIVQILRSEKQPSPALLDKGFDNIAVNVKRILDIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH RRLVKFSRVGDEPRYGFAVDEAIEEALYVLRQDDLLRDVELQYLRRDAGLKVFGNTGQIR HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHH EIFLNLFVNAAQAMAGRGTLRIETREAGPMVEVLVGDTGPGVPAEAVGRIFEPFFTTKSS HHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC MHGTGLGLAISTEIAHEHGGSLSLRHTGSEGATFCVALPRERA CCCCCCEEEEEHHHHHHCCCEEEEEECCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]