Click here to switch to the map view.

The map label for this gene is yhdH [H]

Identifier: 124266094

GI number: 124266094

Start: 952500

End: 953483

Strand: Direct

Name: yhdH [H]

Synonym: Mpe_A0901

Alternate gene names: 124266094

Gene position: 952500-953483 (Clockwise)

Preceding gene: 124266093

Following gene: 124266096

Centisome position: 23.55

GC content: 73.17

Gene sequence:

>984_bases
ATGTTCCGCGCCCTGATGCTGACGCAGGTGGACCGGCGCACCCATGCCGAGCTGGTGGAGCTGGACGAGTCGCAGTTGCC
GCCCGGCGACGTGACGGTGCGCATCGAGTACTCCAGCCTCAACTTCAAGGACGCGCTCGCGGTCACCGGCCGCGGCGCGG
TGGTGAAGAACTGGCCACTGGTGCCGGGGATCGACCTGGCCGGCGTGGTCGAGCGCAGCAGCGACCCGGCCTGGCAGCCG
GGCGACCGCGTCGTGGTCAACGGCTGGGGCCTGGGCGAAACCGAATGGGGAGGGCTGGCGCAGAAGGCGCGGCTGTCGCC
GCAATGCCTGTTGCGGCTGCCGGCGGCCTTCACCACGCGCGAGGCGATGGCCATCGCCACGGCCGGCTACACCGCCGCGC
TGTGCGTCATCGCGCTGCAGCGCCACGGCCTCGAGCCGGGCGCCGACGAGGTGCTGGTCACCGGCGCGGCCGGTGGCGTG
GGCTCGGTGGCGGTGGCGCTGCTGGCCGGGCTGGGCTTCCGGGTGGTCGCGTCGACCGGGCGGCCGGCGGAGGCCGAGTA
CCTGCGCTTCCTCGGCGCCGCGGCGATCCTCGACCGGGCGGAACTGTCGTCGCCCGGCAAGCCGCTGCAGAGCGAGCGCT
GGGCCGGCGTGGTGGACACGGTGGGCAGCCACACGCTGGTCAACGCCTGCGCGCAGACGCAGTGGCACGGCGCGGTGACC
GCCTGCGGCCTGGCCCAGGGCAGCGACCTGCCCGGCACGGTGATGCCCTTCATCCTGCGCGGCATCACGCTGTACGGCAT
CAACTGCATGCGCGTCGACGAGGCCACGCGGCGCCTCGCCTGGGAGCTGCTGGCGCAGCATGTGCGCAGCGACCAGCTGG
CGCAGATGACGCAGGAGATCGGGCTGTCCGAGGTGATCGCCTATTCGCCCGGCCTGCTGGACGGCAAGGTGCGCGGACGC
ACCGTGGTCGACGTCAACCGCTGA

Upstream 100 bases:

>100_bases
AAGTACCGGCCCGCGCCGCTGCTGAAGGAAATGGTGGCCGCCGGCCGCCTGGGCCGCAAGAGCGGCCGCGGCTTCTACAC
CTACGCCTGAGGGCGATCGC

Downstream 100 bases:

>100_bases
GCAGTGCCGGGGCGGTGGCCGGCCGCCGCGCGGTGGCGTCGGCGCCCGGCGCCGACATGCCGTCGGCACGCAACGCGCGG
TACTCGCCCGGCTGCGACCC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MFRALMLTQVDRRTHAELVELDESQLPPGDVTVRIEYSSLNFKDALAVTGRGAVVKNWPLVPGIDLAGVVERSSDPAWQP
GDRVVVNGWGLGETEWGGLAQKARLSPQCLLRLPAAFTTREAMAIATAGYTAALCVIALQRHGLEPGADEVLVTGAAGGV
GSVAVALLAGLGFRVVASTGRPAEAEYLRFLGAAAILDRAELSSPGKPLQSERWAGVVDTVGSHTLVNACAQTQWHGAVT
ACGLAQGSDLPGTVMPFILRGITLYGINCMRVDEATRRLAWELLAQHVRSDQLAQMTQEIGLSEVIAYSPGLLDGKVRGR
TVVDVNR

Sequences:

>Translated_327_residues
MFRALMLTQVDRRTHAELVELDESQLPPGDVTVRIEYSSLNFKDALAVTGRGAVVKNWPLVPGIDLAGVVERSSDPAWQP
GDRVVVNGWGLGETEWGGLAQKARLSPQCLLRLPAAFTTREAMAIATAGYTAALCVIALQRHGLEPGADEVLVTGAAGGV
GSVAVALLAGLGFRVVASTGRPAEAEYLRFLGAAAILDRAELSSPGKPLQSERWAGVVDTVGSHTLVNACAQTQWHGAVT
ACGLAQGSDLPGTVMPFILRGITLYGINCMRVDEATRRLAWELLAQHVRSDQLAQMTQEIGLSEVIAYSPGLLDGKVRGR
TVVDVNR
>Mature_327_residues
MFRALMLTQVDRRTHAELVELDESQLPPGDVTVRIEYSSLNFKDALAVTGRGAVVKNWPLVPGIDLAGVVERSSDPAWQP
GDRVVVNGWGLGETEWGGLAQKARLSPQCLLRLPAAFTTREAMAIATAGYTAALCVIALQRHGLEPGADEVLVTGAAGGV
GSVAVALLAGLGFRVVASTGRPAEAEYLRFLGAAAILDRAELSSPGKPLQSERWAGVVDTVGSHTLVNACAQTQWHGAVT
ACGLAQGSDLPGTVMPFILRGITLYGINCMRVDEATRRLAWELLAQHVRSDQLAQMTQEIGLSEVIAYSPGLLDGKVRGR
TVVDVNR

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=325, Percent_Identity=47.0769230769231, Blast_Score=306, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34697; Mature: 34697

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRALMLTQVDRRTHAELVELDESQLPPGDVTVRIEYSSLNFKDALAVTGRGAVVKNWPL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHEEECCCCCEEECCCC
VPGIDLAGVVERSSDPAWQPGDRVVVNGWGLGETEWGGLAQKARLSPQCLLRLPAAFTTR
CCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHCCCHHHHH
EAMAIATAGYTAALCVIALQRHGLEPGADEVLVTGAAGGVGSVAVALLAGLGFRVVASTG
HHHHEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCC
RPAEAEYLRFLGAAAILDRAELSSPGKPLQSERWAGVVDTVGSHTLVNACAQTQWHGAVT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCE
ACGLAQGSDLPGTVMPFILRGITLYGINCMRVDEATRRLAWELLAQHVRSDQLAQMTQEI
EECCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GLSEVIAYSPGLLDGKVRGRTVVDVNR
CHHHHHHCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MFRALMLTQVDRRTHAELVELDESQLPPGDVTVRIEYSSLNFKDALAVTGRGAVVKNWPL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHEEECCCCCEEECCCC
VPGIDLAGVVERSSDPAWQPGDRVVVNGWGLGETEWGGLAQKARLSPQCLLRLPAAFTTR
CCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHCCCHHHHH
EAMAIATAGYTAALCVIALQRHGLEPGADEVLVTGAAGGVGSVAVALLAGLGFRVVASTG
HHHHEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCC
RPAEAEYLRFLGAAAILDRAELSSPGKPLQSERWAGVVDTVGSHTLVNACAQTQWHGAVT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCE
ACGLAQGSDLPGTVMPFILRGITLYGINCMRVDEATRRLAWELLAQHVRSDQLAQMTQEI
EECCCCCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GLSEVIAYSPGLLDGKVRGRTVVDVNR
CHHHHHHCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]