| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is adh [H]
Identifier: 124266070
GI number: 124266070
Start: 917420
End: 919582
Strand: Reverse
Name: adh [H]
Synonym: Mpe_A0877
Alternate gene names: 124266070
Gene position: 919582-917420 (Counterclockwise)
Preceding gene: 124266072
Following gene: 124266068
Centisome position: 22.74
GC content: 70.32
Gene sequence:
>2163_bases ATGCACTCATGGAAGGCCGTCCTGCGCCATGGCGCGACCCCTCTGATCCTCGCGGCGACCCTGGCCGGCAGTCCCTGCGC GTCGGCCACGCCGGCGACCCCCGTGAACGCCGCGCGACTGGCCGCCGCGGCCCAGGAGCCCGCCAACTGGATGACGCACG GCGGCACCTACCAGGAGGCGCGCTACAGCCCGCTGGACCAGATCAACACGCGCAGCATCGCGCGGCTGAAGCTGGCCTGG TACGGCGACTTCGACACCTCGCGAGGCCAGGAGTCCACGCCCTTGGTGATCGACGGCGTGATGTACACGACCTCGAGCTG GTCGAAGGTCTACGCCTACGACGCCGCCACCGGCAAGCTGCTGTGGCGCCATGACCCGAAGGTGCCTGGCGACCGCGGCG CGGACGCCTGCTGCGACGTGGTCAACCGTGGCGTCGCCGCGTGGAACGGCAAGGTCTACGTCGGCACCCTGGACGGCCGG CTCGAGGCGCTGGACGCGAAGACGGGCAAGCTCGTGTGGTCCACCGTCACGGTGGACCAGACCCGGCCGTACACGATCAC CGGCGCGCCCCGGGTGGTCAAGGGCAAGGTCCTGATCGGCAACGGCGGCGCGGAGTACGGCGTGCGCGGCTACGTCAGCG CCTACGACGCCGAGACCGGCGCGCTGGCCTGGCGCTTCTACATGACGCCGAATCCCGAGAACAAGCCCGACGGCGCGGCC TCGGACGCGATCCTGATGAGCAAGGCCTACGGCACGTGGCACGACGGGGCCTGGAAGCAGACCGGCGGTGGCGGCACGCC GTGGGATGCCATCGTCTACGACACCGACTTCGATCAGGTGATCATCGGCACCGGCAACGGCAACCCCTGGAGCTGGGAGC ACCGCTCGGGCAGCAAGGGCGACAACCTGTTCCTGGGTTCGCTCCTCGCACTGGATGCGGAGACGGGCGCCTACAAGTGG CACTACCAGGAGACCCCGAGCGAGAACTGGGACTTCACCTCCACGCAGCCGATCATCCTGACCGAGCTGACGCTGCAGGG CCGCCAGCGCAAGGCGCTGCTCCATGCGCCGAAGAACGGCTTCTTCTACGTGGTAGACCGCAAGGACGGCGCGCTGATCT CGGCCGAGCCCTTCACCACGGTCAACTGGGCGACCGGCATCGACCTGAAGACCGGCCGCCCGATCGAGGCGCCCGGCGCC CGCTACGAGCGCACGAAGAAGTCGTTCTGGGCCATGCCGGGGCCGTTCGGCTCCCACAACTGGCACCCCATGGCCTTCAG CCCGAAGACCGGCCTCACCTATATCCCGGTGCAGGACGTGCCGCTCGACTACAACTACTCGCCCGACTTCAAGTACTCGC CGCAGCGCGGCACCTGGAACACCGGCATCGAGGCCACCACCTTCGCCGGCCCCGGCAGCGAGTCGCATCGGCGCCTGCTG GCCATGCAGACGCGCGGCGCGCTGGTGGCCTGGGACGCCGTCCGGCAGAAGGAGGCCTGGCGGGTCCAGCACGGCAACCT GGCGTCGGCGGGCGTGCTGGCGACCGGCGGCAACCTGGTGTTCCAGGGCACGCCCGATGGCCGGCTGGTGGCCTACACGG CCGACACCGGCCGGCAGGTATGGAGCTGGCAGGGCTTCGACGGCATCATCGCCGGCGCCATGACGTATGCGGTCGGGGGC GAGCAGTATGTCGCGGTCGTGGCCGGCTTCGGTGGCTCGAACGCCCTGCACGCGCCGTTCGCCGTCGCGCCCAAGGTCGG TCTGCACGGACGGATCCTGGCCTTCAAGCTCGATGGCCGGGCGGTGCTGCCCGACAACACCAGACCGCTCCTGCCTCCCA ATGTGCCCGAGCAGACGTGGCCGGCCGAGACCGTGTCGCGCGGCGCCGCACTGTACGGACACTGCGCGGCCTGCCACGGC TTCGGCACCTACGCCGCCAACGTGATCCCCGATCTGCGCCGCTCGCCGATGCTGTCGGTCAAGTCCGCCTGGGATGCGGT GGTCCTGGGCGGCGCGCTGGCCGACAAGGGCATGCCGAACTGGACGGGACGCATCGCCGCCGAGGACGTCGAGGCGATCC GGGCCTATGTGGTCGATCGCGCGCGTCAGCTGAGAGACGACGAGGCGGCCGCGCAGGCCGCTGCGAAGGCCCGGGACCGA TGA
Upstream 100 bases:
>100_bases CGGACTCGACGACGCCGGCGCGATGCATCGCACCGCGGCGCAATGCGGCCTTGCCGCGTCGGCGGGTCCCATCCCATCGA ACACAACGGAGCTCCTCGAC
Downstream 100 bases:
>100_bases AGCTGCGGCCCGCGCGGCGCGCTCAGCGCCGTGCGGGATCGAAGTGCCGGCGCAGGCCCTGCCAGCAGCGCGCGTAGTCG GCCTGCCGCAGCGGCGAGGC
Product: alcohol dehydrogenase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MHSWKAVLRHGATPLILAATLAGSPCASATPATPVNAARLAAAAQEPANWMTHGGTYQEARYSPLDQINTRSIARLKLAW YGDFDTSRGQESTPLVIDGVMYTTSSWSKVYAYDAATGKLLWRHDPKVPGDRGADACCDVVNRGVAAWNGKVYVGTLDGR LEALDAKTGKLVWSTVTVDQTRPYTITGAPRVVKGKVLIGNGGAEYGVRGYVSAYDAETGALAWRFYMTPNPENKPDGAA SDAILMSKAYGTWHDGAWKQTGGGGTPWDAIVYDTDFDQVIIGTGNGNPWSWEHRSGSKGDNLFLGSLLALDAETGAYKW HYQETPSENWDFTSTQPIILTELTLQGRQRKALLHAPKNGFFYVVDRKDGALISAEPFTTVNWATGIDLKTGRPIEAPGA RYERTKKSFWAMPGPFGSHNWHPMAFSPKTGLTYIPVQDVPLDYNYSPDFKYSPQRGTWNTGIEATTFAGPGSESHRRLL AMQTRGALVAWDAVRQKEAWRVQHGNLASAGVLATGGNLVFQGTPDGRLVAYTADTGRQVWSWQGFDGIIAGAMTYAVGG EQYVAVVAGFGGSNALHAPFAVAPKVGLHGRILAFKLDGRAVLPDNTRPLLPPNVPEQTWPAETVSRGAALYGHCAACHG FGTYAANVIPDLRRSPMLSVKSAWDAVVLGGALADKGMPNWTGRIAAEDVEAIRAYVVDRARQLRDDEAAAQAAAKARDR
Sequences:
>Translated_720_residues MHSWKAVLRHGATPLILAATLAGSPCASATPATPVNAARLAAAAQEPANWMTHGGTYQEARYSPLDQINTRSIARLKLAW YGDFDTSRGQESTPLVIDGVMYTTSSWSKVYAYDAATGKLLWRHDPKVPGDRGADACCDVVNRGVAAWNGKVYVGTLDGR LEALDAKTGKLVWSTVTVDQTRPYTITGAPRVVKGKVLIGNGGAEYGVRGYVSAYDAETGALAWRFYMTPNPENKPDGAA SDAILMSKAYGTWHDGAWKQTGGGGTPWDAIVYDTDFDQVIIGTGNGNPWSWEHRSGSKGDNLFLGSLLALDAETGAYKW HYQETPSENWDFTSTQPIILTELTLQGRQRKALLHAPKNGFFYVVDRKDGALISAEPFTTVNWATGIDLKTGRPIEAPGA RYERTKKSFWAMPGPFGSHNWHPMAFSPKTGLTYIPVQDVPLDYNYSPDFKYSPQRGTWNTGIEATTFAGPGSESHRRLL AMQTRGALVAWDAVRQKEAWRVQHGNLASAGVLATGGNLVFQGTPDGRLVAYTADTGRQVWSWQGFDGIIAGAMTYAVGG EQYVAVVAGFGGSNALHAPFAVAPKVGLHGRILAFKLDGRAVLPDNTRPLLPPNVPEQTWPAETVSRGAALYGHCAACHG FGTYAANVIPDLRRSPMLSVKSAWDAVVLGGALADKGMPNWTGRIAAEDVEAIRAYVVDRARQLRDDEAAAQAAAKARDR >Mature_720_residues MHSWKAVLRHGATPLILAATLAGSPCASATPATPVNAARLAAAAQEPANWMTHGGTYQEARYSPLDQINTRSIARLKLAW YGDFDTSRGQESTPLVIDGVMYTTSSWSKVYAYDAATGKLLWRHDPKVPGDRGADACCDVVNRGVAAWNGKVYVGTLDGR LEALDAKTGKLVWSTVTVDQTRPYTITGAPRVVKGKVLIGNGGAEYGVRGYVSAYDAETGALAWRFYMTPNPENKPDGAA SDAILMSKAYGTWHDGAWKQTGGGGTPWDAIVYDTDFDQVIIGTGNGNPWSWEHRSGSKGDNLFLGSLLALDAETGAYKW HYQETPSENWDFTSTQPIILTELTLQGRQRKALLHAPKNGFFYVVDRKDGALISAEPFTTVNWATGIDLKTGRPIEAPGA RYERTKKSFWAMPGPFGSHNWHPMAFSPKTGLTYIPVQDVPLDYNYSPDFKYSPQRGTWNTGIEATTFAGPGSESHRRLL AMQTRGALVAWDAVRQKEAWRVQHGNLASAGVLATGGNLVFQGTPDGRLVAYTADTGRQVWSWQGFDGIIAGAMTYAVGG EQYVAVVAGFGGSNALHAPFAVAPKVGLHGRILAFKLDGRAVLPDNTRPLLPPNVPEQTWPAETVSRGAALYGHCAACHG FGTYAANVIPDLRRSPMLSVKSAWDAVVLGGALADKGMPNWTGRIAAEDVEAIRAYVVDRARQLRDDEAAAQAAAKARDR
Specific function: Catalyzes the oxidation of primary alcohols except for methanol that is not a substrate [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=396, Percent_Identity=26.010101010101, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF00034 Cytochrom_C; PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.2.8 [H]
Molecular weight: Translated: 77704; Mature: 77704
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSWKAVLRHGATPLILAATLAGSPCASATPATPVNAARLAAAAQEPANWMTHGGTYQEA CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCCCC RYSPLDQINTRSIARLKLAWYGDFDTSRGQESTPLVIDGVMYTTSSWSKVYAYDAATGKL CCCCHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEE LWRHDPKVPGDRGADACCDVVNRGVAAWNGKVYVGTLDGRLEALDAKTGKLVWSTVTVDQ EEEECCCCCCCCCHHHHHHHHHCCEEEECCEEEEEECCCEEEEECCCCCEEEEEEEEECC TRPYTITGAPRVVKGKVLIGNGGAEYGVRGYVSAYDAETGALAWRFYMTPNPENKPDGAA CCCEEECCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCC SDAILMSKAYGTWHDGAWKQTGGGGTPWDAIVYDTDFDQVIIGTGNGNPWSWEHRSGSKG CCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCC DNLFLGSLLALDAETGAYKWHYQETPSENWDFTSTQPIILTELTLQGRQRKALLHAPKNG CCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCC FFYVVDRKDGALISAEPFTTVNWATGIDLKTGRPIEAPGARYERTKKSFWAMPGPFGSHN EEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC WHPMAFSPKTGLTYIPVQDVPLDYNYSPDFKYSPQRGTWNTGIEATTFAGPGSESHRRLL CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCEEE AMQTRGALVAWDAVRQKEAWRVQHGNLASAGVLATGGNLVFQGTPDGRLVAYTADTGRQV EEECCCCEEEEHHHHCCHHEEEECCCCCCCCEEEECCEEEEEECCCCEEEEEECCCCCEE WSWQGFDGIIAGAMTYAVGGEQYVAVVAGFGGSNALHAPFAVAPKVGLHGRILAFKLDGR EEECCCCHHHHHHHHEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEECCE AVLPDNTRPLLPPNVPEQTWPAETVSRGAALYGHCAACHGFGTYAANVIPDLRRSPMLSV EECCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHCHHHHCCCCEEH KSAWDAVVLGGALADKGMPNWTGRIAAEDVEAIRAYVVDRARQLRDDEAAAQAAAKARDR HCCCCEEEECCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MHSWKAVLRHGATPLILAATLAGSPCASATPATPVNAARLAAAAQEPANWMTHGGTYQEA CCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCCCC RYSPLDQINTRSIARLKLAWYGDFDTSRGQESTPLVIDGVMYTTSSWSKVYAYDAATGKL CCCCHHHCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCEE LWRHDPKVPGDRGADACCDVVNRGVAAWNGKVYVGTLDGRLEALDAKTGKLVWSTVTVDQ EEEECCCCCCCCCHHHHHHHHHCCEEEECCEEEEEECCCEEEEECCCCCEEEEEEEEECC TRPYTITGAPRVVKGKVLIGNGGAEYGVRGYVSAYDAETGALAWRFYMTPNPENKPDGAA CCCEEECCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCC SDAILMSKAYGTWHDGAWKQTGGGGTPWDAIVYDTDFDQVIIGTGNGNPWSWEHRSGSKG CCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCC DNLFLGSLLALDAETGAYKWHYQETPSENWDFTSTQPIILTELTLQGRQRKALLHAPKNG CCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCC FFYVVDRKDGALISAEPFTTVNWATGIDLKTGRPIEAPGARYERTKKSFWAMPGPFGSHN EEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC WHPMAFSPKTGLTYIPVQDVPLDYNYSPDFKYSPQRGTWNTGIEATTFAGPGSESHRRLL CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCEEE AMQTRGALVAWDAVRQKEAWRVQHGNLASAGVLATGGNLVFQGTPDGRLVAYTADTGRQV EEECCCCEEEEHHHHCCHHEEEECCCCCCCCEEEECCEEEEEECCCCEEEEEECCCCCEE WSWQGFDGIIAGAMTYAVGGEQYVAVVAGFGGSNALHAPFAVAPKVGLHGRILAFKLDGR EEECCCCHHHHHHHHEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEECCE AVLPDNTRPLLPPNVPEQTWPAETVSRGAALYGHCAACHGFGTYAANVIPDLRRSPMLSV EECCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHCHHHHCCCCEEH KSAWDAVVLGGALADKGMPNWTGRIAAEDVEAIRAYVVDRARQLRDDEAAAQAAAKARDR HCCCCEEEECCHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA