Click here to switch to the map view.

The map label for this gene is bkdR [H]

Identifier: 124266066

GI number: 124266066

Start: 912442

End: 912912

Strand: Reverse

Name: bkdR [H]

Synonym: Mpe_A0873

Alternate gene names: 124266066

Gene position: 912912-912442 (Counterclockwise)

Preceding gene: 124266068

Following gene: 124266063

Centisome position: 22.57

GC content: 69.85

Gene sequence:

>471_bases
ATGAAACCCGACACCCTCGACCTGCGCATCCTGGCCGAATTGCAGCGCGACAGCAGCCTGTCGAACGTGGAGCTGGCGCG
CCGCGTGCACCTGTCGCCCTCGCCCTGCCTGGCGCGGGTGCGCGCGCTGGAGGCGGCCGGCGTGATCCGCCACTACGTCG
CGCTGCTCGACCCGGCGCCGCTGGGGCTGCACCTCAACGTCTTCATCTCCATCAGCCTGAAGCAGCAGAACCGCGCCGCG
CTGGAGGCCTTCGAGGCCAGCGTGTGCGCGCGCGACGAGGTGATGGAGTGCTACCTGATGACCGGCGACGCCGACTACCT
GCTGCGCGTGGCCGTGGCCGACATGGCGGCGCTGGAGCGCTTCATCCTCGAACAGCTGTCGCCGATCGCGCAGGTGGAGA
AGATCCGCTCCAGCTTCGCGCTGAAGCAGGTGCGCTACAAGACCGCGCTGCCGCTGGCCGCCGGCAGCTGA

Upstream 100 bases:

>100_bases
ACTGTGCGCCTGCGGAGGCCGCAGATGCCACCGAAAGACGGTGCCGGCGGCCCGATTTACCGCATAAAGTGCTGCGACTC
CTTGATTTGACGGCACGACG

Downstream 100 bases:

>100_bases
GCGCCGCCGGGCACGGCCGCCGCGCGGCGCGCGCGCCGGTCCTGCCGCAGCGCGAGGCCGAACACCACCAGCCCGCCCAG
CGCGAGCAGCGCGCCGACCC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKPDTLDLRILAELQRDSSLSNVELARRVHLSPSPCLARVRALEAAGVIRHYVALLDPAPLGLHLNVFISISLKQQNRAA
LEAFEASVCARDEVMECYLMTGDADYLLRVAVADMAALERFILEQLSPIAQVEKIRSSFALKQVRYKTALPLAAGS

Sequences:

>Translated_156_residues
MKPDTLDLRILAELQRDSSLSNVELARRVHLSPSPCLARVRALEAAGVIRHYVALLDPAPLGLHLNVFISISLKQQNRAA
LEAFEASVCARDEVMECYLMTGDADYLLRVAVADMAALERFILEQLSPIAQVEKIRSSFALKQVRYKTALPLAAGS
>Mature_156_residues
MKPDTLDLRILAELQRDSSLSNVELARRVHLSPSPCLARVRALEAAGVIRHYVALLDPAPLGLHLNVFISISLKQQNRAA
LEAFEASVCARDEVMECYLMTGDADYLLRVAVADMAALERFILEQLSPIAQVEKIRSSFALKQVRYKTALPLAAGS

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=147, Percent_Identity=42.1768707482993, Blast_Score=120, Evalue=3e-29,
Organism=Escherichia coli, GI87081742, Length=149, Percent_Identity=36.9127516778523, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17201; Mature: 17201

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDTLDLRILAELQRDSSLSNVELARRVHLSPSPCLARVRALEAAGVIRHYVALLDPAP
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LGLHLNVFISISLKQQNRAALEAFEASVCARDEVMECYLMTGDADYLLRVAVADMAALER
CCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHH
FILEQLSPIAQVEKIRSSFALKQVRYKTALPLAAGS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKPDTLDLRILAELQRDSSLSNVELARRVHLSPSPCLARVRALEAAGVIRHYVALLDPAP
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LGLHLNVFISISLKQQNRAALEAFEASVCARDEVMECYLMTGDADYLLRVAVADMAALER
CCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHH
FILEQLSPIAQVEKIRSSFALKQVRYKTALPLAAGS
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]