| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yciI [H]
Identifier: 124266056
GI number: 124266056
Start: 899725
End: 900024
Strand: Direct
Name: yciI [H]
Synonym: Mpe_A0863
Alternate gene names: 124266056
Gene position: 899725-900024 (Clockwise)
Preceding gene: 124266054
Following gene: 124266057
Centisome position: 22.25
GC content: 72.67
Gene sequence:
>300_bases ATGCTCTTCGCCCTGCACATGATCGACAAGCCCGCCAGCCTCGAGCTGCGCCAGCGGCTGCGCCCGGCGCACCGGGCGCA CCTCGATCTGATCGCCGACCGCCTGGCGATCGCCGGTCCGCTGCTCGACGAGGGCGGCGCGATGGCCGGCAGCCTGATCG TCGCCGAGTTCGCCGACCGCGCCGCGGTCGAGGACTGGCTGGCGAACGAGCCCTTCACGGTCGGAGGGCTCTACGCGCGG GTCGACATCCGGCCGTTCCGCAACGTGTACCCGCAGCGCGCGGGGTTCGCCGAGGTCTGA
Upstream 100 bases:
>100_bases AGGCCGCGGCGGCCGATCGCCGGCCGCAGCCTGCGGCGCATTGTGGCGCCGCGACGCCGCAGAATCGAGCCTTCCCTCAC CCAGACCTTCCGGAGTCCGC
Downstream 100 bases:
>100_bases AGGGCCGCCGTCGCCCGCACAGCGCCGATTCGCCGCAGGCAGAATCCGCATCCACAGCAACCGACAGCGGAGTCACCCAT GAGCGCCGTCACGTTCCCGG
Product: YciI-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MLFALHMIDKPASLELRQRLRPAHRAHLDLIADRLAIAGPLLDEGGAMAGSLIVAEFADRAAVEDWLANEPFTVGGLYAR VDIRPFRNVYPQRAGFAEV
Sequences:
>Translated_99_residues MLFALHMIDKPASLELRQRLRPAHRAHLDLIADRLAIAGPLLDEGGAMAGSLIVAEFADRAAVEDWLANEPFTVGGLYAR VDIRPFRNVYPQRAGFAEV >Mature_99_residues MLFALHMIDKPASLELRQRLRPAHRAHLDLIADRLAIAGPLLDEGGAMAGSLIVAEFADRAAVEDWLANEPFTVGGLYAR VDIRPFRNVYPQRAGFAEV
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yciI family [H]
Homologues:
Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=38.7755102040816, Blast_Score=67, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR005545 [H]
Pfam domain/function: PF03795 YCII [H]
EC number: NA
Molecular weight: Translated: 10924; Mature: 10924
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFALHMIDKPASLELRQRLRPAHRAHLDLIADRLAIAGPLLDEGGAMAGSLIVAEFADR CEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AAVEDWLANEPFTVGGLYARVDIRPFRNVYPQRAGFAEV HHHHHHHCCCCCEECCEEEEEECCHHHHCCCCCCCCCCC >Mature Secondary Structure MLFALHMIDKPASLELRQRLRPAHRAHLDLIADRLAIAGPLLDEGGAMAGSLIVAEFADR CEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AAVEDWLANEPFTVGGLYARVDIRPFRNVYPQRAGFAEV HHHHHHHCCCCCEECCEEEEEECCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]