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The map label for this gene is yeiE [H]

Identifier: 124266054

GI number: 124266054

Start: 898045

End: 899022

Strand: Direct

Name: yeiE [H]

Synonym: Mpe_A0861

Alternate gene names: 124266054

Gene position: 898045-899022 (Clockwise)

Preceding gene: 124266050

Following gene: 124266056

Centisome position: 22.21

GC content: 73.93

Gene sequence:

>978_bases
ATGATCGATAAATCAGATCAAAAGAAAAGGCGCCCGGCGCGCGCCGCCGTGGCGGTCGACGGCTCGCCGCCGCTGCTGCC
CGCGCGGCTGCGCCTGGGGCTGCGCCAGCTCGAGGTGTTCGTGGCCACCGCACGCGAGGGCAGCACGCGCGCCGCGGCCG
ACCGCGTGGCGCGCTCGCAGTCGGCGGCCAGCACCGCGCTGGCCGAGCTGGAGGCGGTGGTCGGCGTGCAGCTGTTCGAC
CGCGTGGGCCGCCGCGTGCTGCTCAACGAGAACGGCCGTGCGCTGCTGCCGCGGGCGCAGAGCCTGCTCGACGATGCCGC
CGAGCTGGAGGGGCTGTTCAGCGGCGCGCATGAGGCGCCGCTGCGCGTGGCCGCGAGCTTCACGATCGGCGAGTACCTGC
TGCCCGAGCGGGTGTCGCGCTGGATGCTCACCCACCCGGCCAGTCCGGTGCAGCTGCGCATCGGCAACACCCGCGAGGTG
GTGGAAGCGGTGGCGGCGTTCGACGCCGACGTCGGCTTCATCGAGGGGCCGCAGACCCACCCCGATCTGGTCGTGCACCC
GTGGCTGAGCGACGAGCTCGTGATCGTCGCCGCGCCCGATCACCCGCTCGCGGGGCGGGTGGCCACGCAGCGCCAGCTCG
CGCAGGCCACCTGGGTGCTGCGAGAACAGGGCTCCGGGACGCGCCAGGTCGCCGATGCCTGGCTGGTGCAGTACCTGCCG
CAGGTGAAGGTGGGCATCGAACTCGGCAGCACCGAGGCCATCAAGCATGTGGTGGCGGCCGGTGGCTGGCTCGGCTGCCT
GTCTCGCCACGCGGTCGCGCAGTCGCTGGCCGACGGGCAGCTGGTGGCGCTGGACACGCGCCTGCCGCTGCCGACGCGCC
GCCTGTCGATGGTGCTGCGCCGCGACAAGCGGCCCGGCCGCACCACGGCCGACTTCATACGCCACTGCGGCGGCCAGGCC
GGTACGGGCCGCCGCTGA

Upstream 100 bases:

>100_bases
GGAGAGGAACTTGAACACCGTCCGGTCCCGGGTTGGCTGAGGGCTGCGATCGATGGTAGTGACGTGAACTCAAAGGAAAA
AGCGGAGAATATTGCTCACG

Downstream 100 bases:

>100_bases
CAGCGGCCCGCAACTCAGCCGCGCACCGGGCTGGAGTAGCCGGAGACGAAATCCTTGGCCGCGCCGCCCTCGGGCGGGAA
CACGTGGCGGCGGATCTTCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIDKSDQKKRRPARAAVAVDGSPPLLPARLRLGLRQLEVFVATAREGSTRAAADRVARSQSAASTALAELEAVVGVQLFD
RVGRRVLLNENGRALLPRAQSLLDDAAELEGLFSGAHEAPLRVAASFTIGEYLLPERVSRWMLTHPASPVQLRIGNTREV
VEAVAAFDADVGFIEGPQTHPDLVVHPWLSDELVIVAAPDHPLAGRVATQRQLAQATWVLREQGSGTRQVADAWLVQYLP
QVKVGIELGSTEAIKHVVAAGGWLGCLSRHAVAQSLADGQLVALDTRLPLPTRRLSMVLRRDKRPGRTTADFIRHCGGQA
GTGRR

Sequences:

>Translated_325_residues
MIDKSDQKKRRPARAAVAVDGSPPLLPARLRLGLRQLEVFVATAREGSTRAAADRVARSQSAASTALAELEAVVGVQLFD
RVGRRVLLNENGRALLPRAQSLLDDAAELEGLFSGAHEAPLRVAASFTIGEYLLPERVSRWMLTHPASPVQLRIGNTREV
VEAVAAFDADVGFIEGPQTHPDLVVHPWLSDELVIVAAPDHPLAGRVATQRQLAQATWVLREQGSGTRQVADAWLVQYLP
QVKVGIELGSTEAIKHVVAAGGWLGCLSRHAVAQSLADGQLVALDTRLPLPTRRLSMVLRRDKRPGRTTADFIRHCGGQA
GTGRR
>Mature_325_residues
MIDKSDQKKRRPARAAVAVDGSPPLLPARLRLGLRQLEVFVATAREGSTRAAADRVARSQSAASTALAELEAVVGVQLFD
RVGRRVLLNENGRALLPRAQSLLDDAAELEGLFSGAHEAPLRVAASFTIGEYLLPERVSRWMLTHPASPVQLRIGNTREV
VEAVAAFDADVGFIEGPQTHPDLVVHPWLSDELVIVAAPDHPLAGRVATQRQLAQATWVLREQGSGTRQVADAWLVQYLP
QVKVGIELGSTEAIKHVVAAGGWLGCLSRHAVAQSLADGQLVALDTRLPLPTRRLSMVLRRDKRPGRTTADFIRHCGGQA
GTGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=287, Percent_Identity=44.9477351916376, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1788748, Length=307, Percent_Identity=31.2703583061889, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI87082132, Length=259, Percent_Identity=29.3436293436293, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787601, Length=304, Percent_Identity=26.6447368421053, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786401, Length=266, Percent_Identity=27.0676691729323, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790399, Length=273, Percent_Identity=25.6410256410256, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788296, Length=296, Percent_Identity=25.6756756756757, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI157672245, Length=236, Percent_Identity=28.8135593220339, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI145693105, Length=233, Percent_Identity=26.1802575107296, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787530, Length=291, Percent_Identity=25.085910652921, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081904, Length=260, Percent_Identity=25.3846153846154, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35114; Mature: 35114

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKSDQKKRRPARAAVAVDGSPPLLPARLRLGLRQLEVFVATAREGSTRAAADRVARSQ
CCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
SAASTALAELEAVVGVQLFDRVGRRVLLNENGRALLPRAQSLLDDAAELEGLFSGAHEAP
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHCCCCCCC
LRVAASFTIGEYLLPERVSRWMLTHPASPVQLRIGNTREVVEAVAAFDADVGFIEGPQTH
HHEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
PDLVVHPWLSDELVIVAAPDHPLAGRVATQRQLAQATWVLREQGSGTRQVADAWLVQYLP
CCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QVKVGIELGSTEAIKHVVAAGGWLGCLSRHAVAQSLADGQLVALDTRLPLPTRRLSMVLR
CCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
RDKRPGRTTADFIRHCGGQAGTGRR
HCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIDKSDQKKRRPARAAVAVDGSPPLLPARLRLGLRQLEVFVATAREGSTRAAADRVARSQ
CCCCCCHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH
SAASTALAELEAVVGVQLFDRVGRRVLLNENGRALLPRAQSLLDDAAELEGLFSGAHEAP
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHCCCCCCC
LRVAASFTIGEYLLPERVSRWMLTHPASPVQLRIGNTREVVEAVAAFDADVGFIEGPQTH
HHEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC
PDLVVHPWLSDELVIVAAPDHPLAGRVATQRQLAQATWVLREQGSGTRQVADAWLVQYLP
CCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QVKVGIELGSTEAIKHVVAAGGWLGCLSRHAVAQSLADGQLVALDTRLPLPTRRLSMVLR
CCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
RDKRPGRTTADFIRHCGGQAGTGRR
HCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]