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The map label for this gene is sspA [H]

Identifier: 124266045

GI number: 124266045

Start: 888883

End: 889497

Strand: Direct

Name: sspA [H]

Synonym: Mpe_A0852

Alternate gene names: 124266045

Gene position: 888883-889497 (Clockwise)

Preceding gene: 124266044

Following gene: 124266046

Centisome position: 21.98

GC content: 62.44

Gene sequence:

>615_bases
ATGATGGTGCTTTACTCCGGAACGACCGACCCCTACTCGCACCGCTGCCGTTTCGTGCTGTTCGAGAAGGGCATGGATTT
CGAGATCCGCGATGTCGACCTGTTCGCGAAACCCGAAGACATCGCGCTGATGAACCCGTACAACGAGGTGCCCATCCTCG
TCGAACGCGACCTCATCCTGTACGAGTCGCACATCATCAACGAGTACATCGACGAGCGCTTCCCGCACCCGCAGCTGATG
CCGGGCGACCCGGTGGCGCGTGCGCGCGTGCGGCTGTTCCTGTTCAATTTCGAGAAGGAACTGTTCGCGCACGTGAACCT
GCTCGAAGGCCGCAGCGGCGTGAAGGCCACCGACAAGCAGCTCGAGAAGGCGCGCAGCCAGATCCGCGATCGCCTCACGC
AGCTCGCGCCGATCTTCCTGAAGAACAAGTACATGCTCGGCGACGACTTCTCGATGCTCGACGTCGCGATCGCGCCGCTG
CTGTGGCGCCTGGACTACTACGCGATCGACCTGTCGAAGAACGCGCTGCCGCTGCTGAAGTACGCCGAGCGCATCTTCTC
GCGCCCGGCCTACATCGAGGCGCTGACGCCGTCCGAGAAGGTGATGCGCAAGTAG

Upstream 100 bases:

>100_bases
CGCCCACCGGTCTGAGACGGCGTGAGCGGAGCGGGATGCATGCATCCGCTCCGCTTGCGTTTTTTCTGATGGCCCCCGAA
GAACCTAGGAGCCCGCCGCC

Downstream 100 bases:

>100_bases
GTCGCGCGGCAGGCAGGAGCGCCACGATGACGATCCCCGTCACGCCGGACACGCAGGGCGCCTCGACGCGCCCCTACCTG
ATCCGCGCGCTGCACGACTG

Product: putative transcription modulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MMVLYSGTTDPYSHRCRFVLFEKGMDFEIRDVDLFAKPEDIALMNPYNEVPILVERDLILYESHIINEYIDERFPHPQLM
PGDPVARARVRLFLFNFEKELFAHVNLLEGRSGVKATDKQLEKARSQIRDRLTQLAPIFLKNKYMLGDDFSMLDVAIAPL
LWRLDYYAIDLSKNALPLLKYAERIFSRPAYIEALTPSEKVMRK

Sequences:

>Translated_204_residues
MMVLYSGTTDPYSHRCRFVLFEKGMDFEIRDVDLFAKPEDIALMNPYNEVPILVERDLILYESHIINEYIDERFPHPQLM
PGDPVARARVRLFLFNFEKELFAHVNLLEGRSGVKATDKQLEKARSQIRDRLTQLAPIFLKNKYMLGDDFSMLDVAIAPL
LWRLDYYAIDLSKNALPLLKYAERIFSRPAYIEALTPSEKVMRK
>Mature_204_residues
MMVLYSGTTDPYSHRCRFVLFEKGMDFEIRDVDLFAKPEDIALMNPYNEVPILVERDLILYESHIINEYIDERFPHPQLM
PGDPVARARVRLFLFNFEKELFAHVNLLEGRSGVKATDKQLEKARSQIRDRLTQLAPIFLKNKYMLGDDFSMLDVAIAPL
LWRLDYYAIDLSKNALPLLKYAERIFSRPAYIEALTPSEKVMRK

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4758484, Length=201, Percent_Identity=30.8457711442786, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI300360534, Length=194, Percent_Identity=30.9278350515464, Blast_Score=84, Evalue=7e-17,
Organism=Homo sapiens, GI38016131, Length=184, Percent_Identity=30.4347826086957, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI300360569, Length=174, Percent_Identity=31.0344827586207, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI300360532, Length=198, Percent_Identity=28.7878787878788, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI22202624, Length=182, Percent_Identity=29.6703296703297, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI300360567, Length=181, Percent_Identity=28.7292817679558, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI300360571, Length=109, Percent_Identity=34.8623853211009, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1789624, Length=204, Percent_Identity=43.6274509803922, Blast_Score=173, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17551302, Length=177, Percent_Identity=31.638418079096, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355779, Length=177, Percent_Identity=28.2485875706215, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23892; Mature: 23892

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVLYSGTTDPYSHRCRFVLFEKGMDFEIRDVDLFAKPEDIALMNPYNEVPILVERDLIL
CEEEEECCCCCHHCCEEEEEEECCCCEEEEEEEEEECCCCEEEECCCCCCCEEEECCCHH
YESHIINEYIDERFPHPQLMPGDPVARARVRLFLFNFEKELFAHVNLLEGRSGVKATDKQ
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCHHHHH
LEKARSQIRDRLTQLAPIFLKNKYMLGDDFSMLDVAIAPLLWRLDYYAIDLSKNALPLLK
HHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHH
YAERIFSRPAYIEALTPSEKVMRK
HHHHHHCCCCEEEEECCHHHHHCC
>Mature Secondary Structure
MMVLYSGTTDPYSHRCRFVLFEKGMDFEIRDVDLFAKPEDIALMNPYNEVPILVERDLIL
CEEEEECCCCCHHCCEEEEEEECCCCEEEEEEEEEECCCCEEEECCCCCCCEEEECCCHH
YESHIINEYIDERFPHPQLMPGDPVARARVRLFLFNFEKELFAHVNLLEGRSGVKATDKQ
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCHHHHH
LEKARSQIRDRLTQLAPIFLKNKYMLGDDFSMLDVAIAPLLWRLDYYAIDLSKNALPLLK
HHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHH
YAERIFSRPAYIEALTPSEKVMRK
HHHHHHCCCCEEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]