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The map label for this gene is sspB [H]

Identifier: 124266046

GI number: 124266046

Start: 889524

End: 890060

Strand: Direct

Name: sspB [H]

Synonym: Mpe_A0853

Alternate gene names: 124266046

Gene position: 889524-890060 (Clockwise)

Preceding gene: 124266045

Following gene: 124266047

Centisome position: 22.0

GC content: 71.69

Gene sequence:

>537_bases
ATGACGATCCCCGTCACGCCGGACACGCAGGGCGCCTCGACGCGCCCCTACCTGATCCGCGCGCTGCACGACTGGTGCAC
CGACAACGGCTTCACGCCCTATCTCGCGGTGTACGTGGACGGCTCGGTGCAGGTACCGGCCGAGTACGTCAAGAACAACG
AGATCGTGCTGAACGCCAGCTTCGAGGCCACCAGCAGCCTGCAGCTCGGCAACGACTTCATCAGCTTCAAGGCGCGCTTC
GGCGGCACCGCCCGCGAGATCGTCGTGCCGATCGACCACGTGATCGCCATCTACGCGCGCGAGAACGGGCAGGGCATGGC
CTTTCCCGCGCCGCCGGTTGGCGCAGAGCCCCCGCCCGCCGAGGGCAACAGCAGTGCTGCGGAGGCCGCGGCCGCGCCCC
GCGGCCTCCGGCTGGCCGAGACGCCGGCCGCCGATCCGTCGCCCGGGGACGAGGGCGCACGCGCGGCCGACGAAGACGAG
CCCACGCCGCCCGAGCCGCCCGGTAGCGGCCGTCCCTCGCTCAAGCGCGTCAAGTAA

Upstream 100 bases:

>100_bases
ACGCCGAGCGCATCTTCTCGCGCCCGGCCTACATCGAGGCGCTGACGCCGTCCGAGAAGGTGATGCGCAAGTAGGTCGCG
CGGCAGGCAGGAGCGCCACG

Downstream 100 bases:

>100_bases
ACGTAGCGCCGGCCGCCGACGGCGGCGCAGTGCGCGCCGCCCGGGCACCCCTCCTACAATCCCCACGGCACGCCGGCTTA
GCTCAGTTGGTAGAGCACCC

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTIPVTPDTQGASTRPYLIRALHDWCTDNGFTPYLAVYVDGSVQVPAEYVKNNEIVLNASFEATSSLQLGNDFISFKARF
GGTAREIVVPIDHVIAIYARENGQGMAFPAPPVGAEPPPAEGNSSAAEAAAAPRGLRLAETPAADPSPGDEGARAADEDE
PTPPEPPGSGRPSLKRVK

Sequences:

>Translated_178_residues
MTIPVTPDTQGASTRPYLIRALHDWCTDNGFTPYLAVYVDGSVQVPAEYVKNNEIVLNASFEATSSLQLGNDFISFKARF
GGTAREIVVPIDHVIAIYARENGQGMAFPAPPVGAEPPPAEGNSSAAEAAAAPRGLRLAETPAADPSPGDEGARAADEDE
PTPPEPPGSGRPSLKRVK
>Mature_177_residues
TIPVTPDTQGASTRPYLIRALHDWCTDNGFTPYLAVYVDGSVQVPAEYVKNNEIVLNASFEATSSLQLGNDFISFKARFG
GTAREIVVPIDHVIAIYARENGQGMAFPAPPVGAEPPPAEGNSSAAEAAAAPRGLRLAETPAADPSPGDEGARAADEDEP
TPPEPPGSGRPSLKRVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=101, Percent_Identity=49.5049504950495, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 18681; Mature: 18550

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPVTPDTQGASTRPYLIRALHDWCTDNGFTPYLAVYVDGSVQVPAEYVKNNEIVLNAS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEECCHHHHCCCCEEEEEC
FEATSSLQLGNDFISFKARFGGTAREIVVPIDHVIAIYARENGQGMAFPAPPVGAEPPPA
CCCCCCEECCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCCCCCC
EGNSSAAEAAAAPRGLRLAETPAADPSPGDEGARAADEDEPTPPEPPGSGRPSLKRVK
CCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TIPVTPDTQGASTRPYLIRALHDWCTDNGFTPYLAVYVDGSVQVPAEYVKNNEIVLNAS
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEECCHHHHCCCCEEEEEC
FEATSSLQLGNDFISFKARFGGTAREIVVPIDHVIAIYARENGQGMAFPAPPVGAEPPPA
CCCCCCEECCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEECCCCCCCCCCCCC
EGNSSAAEAAAAPRGLRLAETPAADPSPGDEGARAADEDEPTPPEPPGSGRPSLKRVK
CCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]