| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is hisD [H]
Identifier: 124266024
GI number: 124266024
Start: 871088
End: 872431
Strand: Direct
Name: hisD [H]
Synonym: Mpe_A0831
Alternate gene names: 124266024
Gene position: 871088-872431 (Clockwise)
Preceding gene: 124266023
Following gene: 124266025
Centisome position: 21.54
GC content: 71.35
Gene sequence:
>1344_bases ATGAGCGCCCCCGCCCGCGTGAACCTGCGCCGCCTGGCCACCACGCAGCCCGATTTCGAGGCGGCATTCCGGGCCGTGCA GCACTGGTCGGCGGAGACCGACGACGCGATCGAGGGCCGTGTGGCGGAGATCCTGGCCGACGTGCGGCAGCGCGGCGACG CCGCGGTCCTGGAGTACACCGCGCGCTTCGACGCACTGCCGGTCGGCTCGATGGGCGAGCTCGAGCTGACGCAGGCCGAT TTCGCCGCCGCCTTCGCGGCCATCACGCCGGCGCAGCGCGACGCGCTGCAGCAGGCCACGCGCCGCATCCGCAGCTACCA CGAGCGCCAGCTCGACGCCTGCGGCCGCAGCTGGAGCTACCGCGACGAGGACGGCACGCTGCTGGGCCAGAAGGTCACGC CGTTGGACCGCGTGGGCATCTACGTGCCGGGTGGCAAGGCGGCCTATCCGTCCAGCCTGCTGATGAATGCGGTGCCGGCC CATGTGGCCGGCGTGCCCGAGATCGTGATGGTGGTGCCCACGCCGAAGGGCGAGCGCAACACCCTGGTGCTGGCCGCCGC GCACGTGGCGGGCGTGACGCGCGCCTTCACGATCGGCGGCGCGCAGGCGGTGGCCGCACTCGCCTACGGCACGGCCACGG TGCCGCAGGTCGACAAGATCACCGGCCCCGGCAACGCCTATGTGGCGAGCGCGAAGAAGCGCGTGTTCGGCACGGTGGGC ATCGACATGATCGCCGGACCCAGCGAAATTCTGGTGCTGGCCGACGGCAGCACGCCGGCCGACTGGGTGGCGATGGACCT GTTCAGCCAGGCCGAGCACGACGAGCTGGCGCAGAGCATCCTGCTGTGCCCCGATGCGGCCTATCTCGACGCAGTACAGG CAGAGATCAACCGGCTGCTGCCCGGCATGCCGCGCGCTGCCATCATCCGCGCTTCGCTGGAAGGGCGCGGCGCGTTGATC CACACCCGCTCGATGGAAGAGGCCTGCGAGATCAGCAACCGCATCGCGCCCGAGCACCTGGAAGTGAGCTCGAACGAGCC GCACCGCTGGGAGCCGCTGCTGCGCCACGCCGGCGCGATCTTCCTCGGTGCCTACACCAGCGAATCGCTGGGCGACTACT GTGCCGGGCCGAACCACGTGCTGCCGACCTCGGGCACCGCGCGCTTCAGCTCGCCGCTGGGCGTCTACGACTTCCAGAAG CGCAGCAGCCTGATCGAGGTCAGCGAGCAGGGCGCGCAGACGCTGGGCGTGATCGCCGCCGAGCTGGCCTACGGCGAGGG CCTGCAGGCGCACGCGCAGGCGGCCGAGATGCGGCTGGCGAAGAAGCCGAGAGCGGCACGATGA
Upstream 100 bases:
>100_bases CGTCGCGGCTGGTGGTGAACCAGGCCGCGCTGAAGCTCAAGCGCGAGGCGATCCGTCCGCTGATCGACGCCTTCGCAGCA GCCATCCCCCAGGAGTGAAC
Downstream 100 bases:
>100_bases GCAGCAGCAACAGCAACAACGGCGGACCCCCGCTCGCGCCCCGCCTCGCGCGCTTCGTCCGCCAGGACGTGCAGAACATG CACGCCTACGCGATCCAGCC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 1 [H]
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSAPARVNLRRLATTQPDFEAAFRAVQHWSAETDDAIEGRVAEILADVRQRGDAAVLEYTARFDALPVGSMGELELTQAD FAAAFAAITPAQRDALQQATRRIRSYHERQLDACGRSWSYRDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSLLMNAVPA HVAGVPEIVMVVPTPKGERNTLVLAAAHVAGVTRAFTIGGAQAVAALAYGTATVPQVDKITGPGNAYVASAKKRVFGTVG IDMIAGPSEILVLADGSTPADWVAMDLFSQAEHDELAQSILLCPDAAYLDAVQAEINRLLPGMPRAAIIRASLEGRGALI HTRSMEEACEISNRIAPEHLEVSSNEPHRWEPLLRHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQK RSSLIEVSEQGAQTLGVIAAELAYGEGLQAHAQAAEMRLAKKPRAAR
Sequences:
>Translated_447_residues MSAPARVNLRRLATTQPDFEAAFRAVQHWSAETDDAIEGRVAEILADVRQRGDAAVLEYTARFDALPVGSMGELELTQAD FAAAFAAITPAQRDALQQATRRIRSYHERQLDACGRSWSYRDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSLLMNAVPA HVAGVPEIVMVVPTPKGERNTLVLAAAHVAGVTRAFTIGGAQAVAALAYGTATVPQVDKITGPGNAYVASAKKRVFGTVG IDMIAGPSEILVLADGSTPADWVAMDLFSQAEHDELAQSILLCPDAAYLDAVQAEINRLLPGMPRAAIIRASLEGRGALI HTRSMEEACEISNRIAPEHLEVSSNEPHRWEPLLRHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQK RSSLIEVSEQGAQTLGVIAAELAYGEGLQAHAQAAEMRLAKKPRAAR >Mature_446_residues SAPARVNLRRLATTQPDFEAAFRAVQHWSAETDDAIEGRVAEILADVRQRGDAAVLEYTARFDALPVGSMGELELTQADF AAAFAAITPAQRDALQQATRRIRSYHERQLDACGRSWSYRDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSLLMNAVPAH VAGVPEIVMVVPTPKGERNTLVLAAAHVAGVTRAFTIGGAQAVAALAYGTATVPQVDKITGPGNAYVASAKKRVFGTVGI DMIAGPSEILVLADGSTPADWVAMDLFSQAEHDELAQSILLCPDAAYLDAVQAEINRLLPGMPRAAIIRASLEGRGALIH TRSMEEACEISNRIAPEHLEVSSNEPHRWEPLLRHAGAIFLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKR SSLIEVSEQGAQTLGVIAAELAYGEGLQAHAQAAEMRLAKKPRAAR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=412, Percent_Identity=39.5631067961165, Blast_Score=271, Evalue=9e-74, Organism=Saccharomyces cerevisiae, GI6319819, Length=410, Percent_Identity=37.3170731707317, Blast_Score=252, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47637; Mature: 47506
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPARVNLRRLATTQPDFEAAFRAVQHWSAETDDAIEGRVAEILADVRQRGDAAVLEYT CCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHH ARFDALPVGSMGELELTQADFAAAFAAITPAQRDALQQATRRIRSYHERQLDACGRSWSY HHCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSLLMNAVPAHVAGVPEIVMVVPTPKGERN CCCCCCEECCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC TLVLAAAHVAGVTRAFTIGGAQAVAALAYGTATVPQVDKITGPGNAYVASAKKRVFGTVG EEEEEEHHHHHHHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHEECC IDMIAGPSEILVLADGSTPADWVAMDLFSQAEHDELAQSILLCPDAAYLDAVQAEINRLL HHEECCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC PGMPRAAIIRASLEGRGALIHTRSMEEACEISNRIAPEHLEVSSNEPHRWEPLLRHAGAI CCCCHHHEEEECCCCCCEEEEECCHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHCCEE FLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIEVSEQGAQTLGVIAA EEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH ELAYGEGLQAHAQAAEMRLAKKPRAAR HHHHCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAPARVNLRRLATTQPDFEAAFRAVQHWSAETDDAIEGRVAEILADVRQRGDAAVLEYT CCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHH ARFDALPVGSMGELELTQADFAAAFAAITPAQRDALQQATRRIRSYHERQLDACGRSWSY HHCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RDEDGTLLGQKVTPLDRVGIYVPGGKAAYPSSLLMNAVPAHVAGVPEIVMVVPTPKGERN CCCCCCEECCCCCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC TLVLAAAHVAGVTRAFTIGGAQAVAALAYGTATVPQVDKITGPGNAYVASAKKRVFGTVG EEEEEEHHHHHHHHHEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHEECC IDMIAGPSEILVLADGSTPADWVAMDLFSQAEHDELAQSILLCPDAAYLDAVQAEINRLL HHEECCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC PGMPRAAIIRASLEGRGALIHTRSMEEACEISNRIAPEHLEVSSNEPHRWEPLLRHAGAI CCCCHHHEEEECCCCCCEEEEECCHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHCCEE FLGAYTSESLGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIEVSEQGAQTLGVIAA EEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH ELAYGEGLQAHAQAAEMRLAKKPRAAR HHHHCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA