Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124266018

Identifier: 124266018

GI number: 124266018

Start: 866098

End: 866766

Strand: Reverse

Name: 124266018

Synonym: Mpe_A0825

Alternate gene names: NA

Gene position: 866766-866098 (Counterclockwise)

Preceding gene: 124266037

Following gene: 124266017

Centisome position: 21.43

GC content: 66.67

Gene sequence:

>669_bases
ATGAGCCCACGGGTCCCGAAGAAAGCACCGCGCCGCACGGCCGAGCGCATCCTGGAGGTGACGCTGGAACTGTTCAACCG
CTTCGGCGAGCCCAACGTCAGCACCACGCTGATCTCGGCCGAGCTCAACATCAGCCCCGGCAACCTCTACTACCACTACC
CGGCCAAGGACGAGCTGATCAACAGCCTGTTCGACCGCTACGAGGCCGCGCTCACCGAGCTGCTGCGGGCGGCCGACAAC
GTGCGCAACGTCGAGGACGCCTGGCTGTTCTTCCACATGCTGTTCGAGCTGATCTGGCAGTACCGCTTCCTGTACCGCGA
CCTGAACGACCTGCTCAGCAAGAACCGGCGCCTGGAGACCCACTTCCAGTTCGTGCTGAAGAACAAGCAGCATGCGGTCA
AGGCGGTGCTCGACGGCCTGAGCCGCGCGCAGGCGATGCGCATCGACGCGCGCGAGGCCGAGCCGGTGGCCACCTCGATG
GTGGTGGTGCTGACCTACTGGCTCAGCTACGAGTACGTGCGCGACCCGCGCAAGGCATTGGAGCCCGAAAGCGCCGGCGC
GGCGCTGCTGCGCGGCGCCCAGCACGTGCTCAGCCTGCTGATGCCCTACCTCGATCCGGGCCAGCGCGAGCACCTGCTGA
TGCTGGCCGGCAGCTACCAGCGCGACTGA

Upstream 100 bases:

>100_bases
GCAGGCCCCGCCATCGGTGCTGGCCGCATTGGTGGCGCGTGATCTTGATGCTAGATTGCCCGCAAACCAGCCCTCTCGCC
CGCCGCGAGACGACCGCGCC

Downstream 100 bases:

>100_bases
CCGATAAGAACGACCGATTCCCCGGAACGACGCAGGAGACAAGCACCATGGCCAAGTGGACCGCCTTCCCTTACGACAAC
GCCGACTACGTGCACGACGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELINSLFDRYEAALTELLRAADN
VRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLETHFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSM
VVVLTYWLSYEYVRDPRKALEPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD

Sequences:

>Translated_222_residues
MSPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELINSLFDRYEAALTELLRAADN
VRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLETHFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSM
VVVLTYWLSYEYVRDPRKALEPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD
>Mature_221_residues
SPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELINSLFDRYEAALTELLRAADNV
RNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLETHFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSMV
VVLTYWLSYEYVRDPRKALEPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25754; Mature: 25623

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELI
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCHHHHH
NSLFDRYEAALTELLRAADNVRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLET
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSMVVVLTYWLSYEYVRDPRKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHC
EPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SPRVPKKAPRRTAERILEVTLELFNRFGEPNVSTTLISAELNISPGNLYYHYPAKDELI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEECCCHHHHH
NSLFDRYEAALTELLRAADNVRNVEDAWLFFHMLFELIWQYRFLYRDLNDLLSKNRRLET
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HFQFVLKNKQHAVKAVLDGLSRAQAMRIDAREAEPVATSMVVVLTYWLSYEYVRDPRKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHC
EPESAGAALLRGAQHVLSLLMPYLDPGQREHLLMLAGSYQRD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA