| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yufP [H]
Identifier: 124265997
GI number: 124265997
Start: 842509
End: 843672
Strand: Direct
Name: yufP [H]
Synonym: Mpe_A0804
Alternate gene names: 124265997
Gene position: 842509-843672 (Clockwise)
Preceding gene: 124265996
Following gene: 124265998
Centisome position: 20.83
GC content: 69.59
Gene sequence:
>1164_bases ATGCTTAAGCTCGAGGCCCGCGCCCAGCCCTCGCAGGCGATGTCGCTGGCGTCGCCGCTGATCGCGCTGGCGTTGACGGT GCTGCTGGCCAGCCTGCTGTTCGTCGCGCTCGGCAAGGACCCGCTGAAGGGCCTGGGCATCTTCTTCCTCGAGCCGCTCA ACGGCATGCGCTCGGTGTCGGAGGTGCTGTTGAAGGCCACGCCGCTGATCCTGTGCGCGCTGGGTCTCGCGGTCTGCTAC CGCTCGAACGTCTGGAACATCGGTGCCGAAGGGCAGTTCCTGCTCGGCGCCATCGCCGGCGGCGGGGTTGCACTGTGGCT CACCAACCTGGGTGTCAGCGGCATGCGCGGCCTGTATTCGCCGCTGGTGCTGCTGGCCGGCGTGGTGGGCGGCATGGCCT GGGCCGCCCTCACCGCGATGCTGCGCGATCGCTTCAACGCCAGCGAGATCCTGGTGAGCCTGATGCTGGTCTACGTGGCC CAGCAACTGCTGAACTACCTGGTGTTCGTGCCCTGGAAGGACCCGGGCGGCTTCAATTTCCCGCAGACGAAGACCTTCGA CGCGTCGACCTGGCTGCCGACGCTGCTGCCGGGCTCGCGGCTGCACTGGGGTTTCGTGCTGGCGCTGGTGATGGTGGCGC TGTTCTGGGTCTTCCTGTTCCGCTCCTGGCGCGGCTACCAACTGCAGGTCGGCGGCCTGGCGCCGGCAGCGGCGCGCTAT GCCGGCTTCTCGGCGCGCGCTTCGCTGTGGACCGCGCTGCTGATGTCGGGCGGCATGGCCGGCCTGGCCGGGGCCATGGA GGCGGCCGGGCCGCTGCGCCAACTGACGCCGCATGTCTCCACCGGCTATGGCTTCACCGCGATCATCGTCTGCTTCGTCG GCCGCCTGCATCCGCTGGGCATCGTGTTCTCCGGCGTGCTGCTGTCGATGCTGCTGATTGGCGGCGAGCTCGGCCAGTCG CGCTTGGGCCTGCCGAACGCGCTGACCGGCGTGTTCCAGGGTCTGCTGCTGTTCCTCCTGCTGGCCTGCGACACGCTGAT CCACTATCGCTTGAAATGGACTCCCCCCGTTGCGGCTGCGCCGCTCCCCCCCGGGGGGGAGCCGCTGGCGGGCCGGCGAA GCCGGACCCGCGGCGGCCACTCGGTCGAGGAATCGGCGCCATGA
Upstream 100 bases:
>100_bases CCGAGCGTTGCGACGATGCGGACCACGGTCGAGCTGATCGGTGAGTGGATGAGCGGGCTGTGGCCGAAGGCCGATACCGC CAACGGCGAGGCGCTGCACC
Downstream 100 bases:
>100_bases ACGAAGCCGCGCTGCTGATCGCCGCGACGCTGGCCTCGGGCACGCCGCTGGCCATCGCCGGGTTGGGCCTGTTGCTGAAC GAGAAGGCCGGCGTGCTGAA
Product: putative transmembrane ABC transporter protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVSEVLLKATPLILCALGLAVCY RSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYSPLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVA QQLLNYLVFVPWKDPGGFNFPQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLGIVFSGVLLSMLLIGGELGQS RLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAAPLPPGGEPLAGRRSRTRGGHSVEESAP
Sequences:
>Translated_387_residues MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVSEVLLKATPLILCALGLAVCY RSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYSPLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVA QQLLNYLVFVPWKDPGGFNFPQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLGIVFSGVLLSMLLIGGELGQS RLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAAPLPPGGEPLAGRRSRTRGGHSVEESAP >Mature_387_residues MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVSEVLLKATPLILCALGLAVCY RSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYSPLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVA QQLLNYLVFVPWKDPGGFNFPQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLGIVFSGVLLSMLLIGGELGQS RLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAAPLPPGGEPLAGRRSRTRGGHSVEESAP
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 41037; Mature: 41037
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHEECCCHHHHHHH EVLLKATPLILCALGLAVCYRSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHH PLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVAQQLLNYLVFVPWKDPGGFNF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC PQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLG CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH IVFSGVLLSMLLIGGELGQSRLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC PLPPGGEPLAGRRSRTRGGHSVEESAP CCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHEECCCHHHHHHH EVLLKATPLILCALGLAVCYRSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHH PLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVAQQLLNYLVFVPWKDPGGFNF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC PQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLG CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH IVFSGVLLSMLLIGGELGQSRLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAA HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC PLPPGGEPLAGRRSRTRGGHSVEESAP CCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]