The gene/protein map for NC_008825 is currently unavailable.
Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yufP [H]

Identifier: 124265997

GI number: 124265997

Start: 842509

End: 843672

Strand: Direct

Name: yufP [H]

Synonym: Mpe_A0804

Alternate gene names: 124265997

Gene position: 842509-843672 (Clockwise)

Preceding gene: 124265996

Following gene: 124265998

Centisome position: 20.83

GC content: 69.59

Gene sequence:

>1164_bases
ATGCTTAAGCTCGAGGCCCGCGCCCAGCCCTCGCAGGCGATGTCGCTGGCGTCGCCGCTGATCGCGCTGGCGTTGACGGT
GCTGCTGGCCAGCCTGCTGTTCGTCGCGCTCGGCAAGGACCCGCTGAAGGGCCTGGGCATCTTCTTCCTCGAGCCGCTCA
ACGGCATGCGCTCGGTGTCGGAGGTGCTGTTGAAGGCCACGCCGCTGATCCTGTGCGCGCTGGGTCTCGCGGTCTGCTAC
CGCTCGAACGTCTGGAACATCGGTGCCGAAGGGCAGTTCCTGCTCGGCGCCATCGCCGGCGGCGGGGTTGCACTGTGGCT
CACCAACCTGGGTGTCAGCGGCATGCGCGGCCTGTATTCGCCGCTGGTGCTGCTGGCCGGCGTGGTGGGCGGCATGGCCT
GGGCCGCCCTCACCGCGATGCTGCGCGATCGCTTCAACGCCAGCGAGATCCTGGTGAGCCTGATGCTGGTCTACGTGGCC
CAGCAACTGCTGAACTACCTGGTGTTCGTGCCCTGGAAGGACCCGGGCGGCTTCAATTTCCCGCAGACGAAGACCTTCGA
CGCGTCGACCTGGCTGCCGACGCTGCTGCCGGGCTCGCGGCTGCACTGGGGTTTCGTGCTGGCGCTGGTGATGGTGGCGC
TGTTCTGGGTCTTCCTGTTCCGCTCCTGGCGCGGCTACCAACTGCAGGTCGGCGGCCTGGCGCCGGCAGCGGCGCGCTAT
GCCGGCTTCTCGGCGCGCGCTTCGCTGTGGACCGCGCTGCTGATGTCGGGCGGCATGGCCGGCCTGGCCGGGGCCATGGA
GGCGGCCGGGCCGCTGCGCCAACTGACGCCGCATGTCTCCACCGGCTATGGCTTCACCGCGATCATCGTCTGCTTCGTCG
GCCGCCTGCATCCGCTGGGCATCGTGTTCTCCGGCGTGCTGCTGTCGATGCTGCTGATTGGCGGCGAGCTCGGCCAGTCG
CGCTTGGGCCTGCCGAACGCGCTGACCGGCGTGTTCCAGGGTCTGCTGCTGTTCCTCCTGCTGGCCTGCGACACGCTGAT
CCACTATCGCTTGAAATGGACTCCCCCCGTTGCGGCTGCGCCGCTCCCCCCCGGGGGGGAGCCGCTGGCGGGCCGGCGAA
GCCGGACCCGCGGCGGCCACTCGGTCGAGGAATCGGCGCCATGA

Upstream 100 bases:

>100_bases
CCGAGCGTTGCGACGATGCGGACCACGGTCGAGCTGATCGGTGAGTGGATGAGCGGGCTGTGGCCGAAGGCCGATACCGC
CAACGGCGAGGCGCTGCACC

Downstream 100 bases:

>100_bases
ACGAAGCCGCGCTGCTGATCGCCGCGACGCTGGCCTCGGGCACGCCGCTGGCCATCGCCGGGTTGGGCCTGTTGCTGAAC
GAGAAGGCCGGCGTGCTGAA

Product: putative transmembrane ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVSEVLLKATPLILCALGLAVCY
RSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYSPLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVA
QQLLNYLVFVPWKDPGGFNFPQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY
AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLGIVFSGVLLSMLLIGGELGQS
RLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAAPLPPGGEPLAGRRSRTRGGHSVEESAP

Sequences:

>Translated_387_residues
MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVSEVLLKATPLILCALGLAVCY
RSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYSPLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVA
QQLLNYLVFVPWKDPGGFNFPQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY
AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLGIVFSGVLLSMLLIGGELGQS
RLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAAPLPPGGEPLAGRRSRTRGGHSVEESAP
>Mature_387_residues
MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVSEVLLKATPLILCALGLAVCY
RSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYSPLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVA
QQLLNYLVFVPWKDPGGFNFPQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY
AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLGIVFSGVLLSMLLIGGELGQS
RLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAAPLPPGGEPLAGRRSRTRGGHSVEESAP

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 41037; Mature: 41037

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHEECCCHHHHHHH
EVLLKATPLILCALGLAVCYRSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHH
PLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVAQQLLNYLVFVPWKDPGGFNF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
PQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY
CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
IVFSGVLLSMLLIGGELGQSRLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAA
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
PLPPGGEPLAGRRSRTRGGHSVEESAP
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKLEARAQPSQAMSLASPLIALALTVLLASLLFVALGKDPLKGLGIFFLEPLNGMRSVS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHEECCCHHHHHHH
EVLLKATPLILCALGLAVCYRSNVWNIGAEGQFLLGAIAGGGVALWLTNLGVSGMRGLYS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHH
PLVLLAGVVGGMAWAALTAMLRDRFNASEILVSLMLVYVAQQLLNYLVFVPWKDPGGFNF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
PQTKTFDASTWLPTLLPGSRLHWGFVLALVMVALFWVFLFRSWRGYQLQVGGLAPAAARY
CCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
AGFSARASLWTALLMSGGMAGLAGAMEAAGPLRQLTPHVSTGYGFTAIIVCFVGRLHPLG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
IVFSGVLLSMLLIGGELGQSRLGLPNALTGVFQGLLLFLLLACDTLIHYRLKWTPPVAAA
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
PLPPGGEPLAGRRSRTRGGHSVEESAP
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]