| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265973
Identifier: 124265973
GI number: 124265973
Start: 814443
End: 815642
Strand: Direct
Name: 124265973
Synonym: Mpe_A0780
Alternate gene names: NA
Gene position: 814443-815642 (Clockwise)
Preceding gene: 124265972
Following gene: 124265974
Centisome position: 20.14
GC content: 68.08
Gene sequence:
>1200_bases ATGGACGCCTACCTGCTCGACTGGGCCAACCTGCTGCTGCGCTGGCTGCACGTGGTCACCGCGGTCGCCTGGATCGGTGC CTCGCTGCACTTCGTGCTGCTCGACGACAGTCTCTACAAGCCGGAGGACCCGGAGCTGAAGAAGAAGGGCGTCGACGGCG AGGCCTGGGCGGTGCACGGCGGCGGCTTCTATCACTCGAACAAGTACCTGGTGGCGCCGCCCGACCTGCCCGAGAAGCTG CACTGGTCGTACTGGGAGAGCTACGCGACCTGGCTGTCGGGCTTTGCGCTGCTGTGCGTGCTGTACTTCGTGAACGCCTC GTCCTTCCTGGTCGACAAGGCGGTGTTCGATTGGTCGCCCGGCGCCGCGGTGGCCGGTGCTCTGGCCTATCTGGTGCTGG GCTGGGTGGTCTACGACGGCATCTGCCGCGTGTTCGGCCGCAAGCCCGACGGTTCGGTGGGTGGCGACCTGAAGGTGGGC ATCGGCGTGTTCGTCTACACCTGCGTGGCGGCGTGGATCGCCTGCCACCTGTTCGCTGGCCGCGCCGCCTTCCTGCTGAC CGGCGCGATGCTGGCCACGGTGATGAGCGCCAACGTGCTGATGGTCATCATCCCCGGCCAGCGCAAGGTGGTGGCGGCGT TGCGCGCGAAGCTGCCGGTCGACCCGAACCTCGGCAAGCGGGGCAAGCAGCGCAGCGTGCACAACACCTACTTCACGATG CCGGTGCTGATCGCGATGCTGTCCAACCACTACGGCATGGTCACGCAGCACCGCCTCAACTGGCTGGTGCTGGTGCTGAT GATGCTGGCTGGTGCGCTGATCCGGCTGTTCTTCGTGCTCCGTCACAAGGCGCCGCCGCGCTGGGAGATCGCCGCCGCGG CGATCGCGATCCTGGCCTGCGTGGCGTGGCTGGTCGCGCCGAAGCACGAGCCCGTGGCGTCGGCGCAGGCGGCGGCGCCG GTGAGCTTCGCGCAGGTGCAGGCGGTGGTGGGCGAGCGCTGCGCGATGTGCCACAACGCCCAGGTCGTCAGCAAGAACAT CCAGCTGCACACGCCCGAGCTGATCGCCGGCCATGCGCAGCAGATCTACCAGCAGGCGGTGGTGCTGAAGACCATGCCGA TGAACAACGCCACCCAGATGACCGACGCCGAGCGTGCGCTGCTGGGTCGTTGGTACGAGGCCGGCGCGCCGCCCCGTTAG
Upstream 100 bases:
>100_bases CTGGACTTCGGCCTGGCCGACCCGGCGCTGCACTACCACGTGCCGCTGCTGGTCAGCCCCTGGGCCTATTCCACCTACCG CGGCAGCTGAGCCGACGCCG
Downstream 100 bases:
>100_bases CGGGCAAGGCCTGGGTACGGGCCTTGCAAGGACCCGAGGGCATTCGAGGAGAACGCCATGGCTTCGGGCACACCCCCCAC CGTCCACCCGGTCGACGAGA
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHGGGFYHSNKYLVAPPDLPEKL HWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSPGAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVG IGVFVYTCVAAWIACHLFAGRAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILACVAWLVAPKHEPVASAQAAAP VSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQQIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR
Sequences:
>Translated_399_residues MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHGGGFYHSNKYLVAPPDLPEKL HWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSPGAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVG IGVFVYTCVAAWIACHLFAGRAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILACVAWLVAPKHEPVASAQAAAP VSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQQIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR >Mature_399_residues MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHGGGFYHSNKYLVAPPDLPEKL HWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSPGAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVG IGVFVYTCVAAWIACHLFAGRAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILACVAWLVAPKHEPVASAQAAAP VSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQQIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43709; Mature: 43709
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEC GGFYHSNKYLVAPPDLPEKLHWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSP CCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVGIGVFVYTCVAAWIACHLFAG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILAC HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VAWLVAPKHEPVASAQAAAPVSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQ HHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCHHHHHHHHH QIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDAYLLDWANLLLRWLHVVTAVAWIGASLHFVLLDDSLYKPEDPELKKKGVDGEAWAVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEC GGFYHSNKYLVAPPDLPEKLHWSYWESYATWLSGFALLCVLYFVNASSFLVDKAVFDWSP CCEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GAAVAGALAYLVLGWVVYDGICRVFGRKPDGSVGGDLKVGIGVFVYTCVAAWIACHLFAG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAAFLLTGAMLATVMSANVLMVIIPGQRKVVAALRAKLPVDPNLGKRGKQRSVHNTYFTM HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH PVLIAMLSNHYGMVTQHRLNWLVLVLMMLAGALIRLFFVLRHKAPPRWEIAAAAIAILAC HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VAWLVAPKHEPVASAQAAAPVSFAQVQAVVGERCAMCHNAQVVSKNIQLHTPELIAGHAQ HHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCHHHHHHHHH QIYQQAVVLKTMPMNNATQMTDAERALLGRWYEAGAPPR HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA