Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is yfhC [C]

Identifier: 124265967

GI number: 124265967

Start: 808625

End: 809125

Strand: Reverse

Name: yfhC [C]

Synonym: Mpe_A0774

Alternate gene names: 124265967

Gene position: 809125-808625 (Counterclockwise)

Preceding gene: 124265968

Following gene: 124265966

Centisome position: 20.01

GC content: 73.45

Gene sequence:

>501_bases
ATGCATGCGTTCCGCCACCCCGACCCCAGCGCCGCGCAGATCGCCGCCGCGCTGCACCGTGCCAATGCCGTCGCGCTGAG
CGCGCTGGCGCTTGGCCGGCACCCCTTCGGCGCGCTGCTGCTCGCCCCCGATCACCAGACCGTGCTGGCCGAGCAGGGCA
ACATCGACACCGTGCAGCACGCCGAGGCCACGCTGCTGCGCACCGCCGCCGCGAAGCATGCGCCCGAGTTCCTGTGGGAC
TGCACGCTGGTCACCACCTTCGAGCCCTGCGCGATGTGCGCCGGCACCGCCTACTGGGCGAACATCGGCCGCGTCGTCTA
CGGTGCCAGCGAGGAGGCGCTGCTCGCGCTGACCGGCAACCACGCCGAGAACCCGACGCTGGCGCTGCCCTGCCGCGAGC
TGCTCGCGCGCGGCCAGAAGCCGGTGCGGGTGTTCGGCCCGGTCCCTGAACTCGAAGCCGAGCTGCTGGCCCCGCACCGC
GGCTTCTGGGCCACCCGCTGA

Upstream 100 bases:

>100_bases
GAGAGCAACGCCAAGCGTGCCGACGAGCACATCGTGCTCGACGACCTGCGGCGCGCGACCAAGGTCGTCGCACGCACGCT
GTACGAGCTGCTGGGCTGAG

Downstream 100 bases:

>100_bases
ACGGCCCGGCACGCCGGCGGCCCGTGGCCGGCATGGTTCCTGCTGCATCCCATCTGGTACACAAGATAGTGCACCAGCAC
ACACCATGCACGCACCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytosine/Adenosine Deaminase; Deaminase; Cytidine/Deoxycytidine Deaminase; Purine Deaminase Protein; Cytidine/Deoxycytidylate Deaminase; Cytidine And Deoxycytidylate Deaminase

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MHAFRHPDPSAAQIAAALHRANAVALSALALGRHPFGALLLAPDHQTVLAEQGNIDTVQHAEATLLRTAAAKHAPEFLWD
CTLVTTFEPCAMCAGTAYWANIGRVVYGASEEALLALTGNHAENPTLALPCRELLARGQKPVRVFGPVPELEAELLAPHR
GFWATR

Sequences:

>Translated_166_residues
MHAFRHPDPSAAQIAAALHRANAVALSALALGRHPFGALLLAPDHQTVLAEQGNIDTVQHAEATLLRTAAAKHAPEFLWD
CTLVTTFEPCAMCAGTAYWANIGRVVYGASEEALLALTGNHAENPTLALPCRELLARGQKPVRVFGPVPELEAELLAPHR
GFWATR
>Mature_166_residues
MHAFRHPDPSAAQIAAALHRANAVALSALALGRHPFGALLLAPDHQTVLAEQGNIDTVQHAEATLLRTAAAKHAPEFLWD
CTLVTTFEPCAMCAGTAYWANIGRVVYGASEEALLALTGNHAENPTLALPCRELLARGQKPVRVFGPVPELEAELLAPHR
GFWATR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17782; Mature: 17782

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAFRHPDPSAAQIAAALHRANAVALSALALGRHPFGALLLAPDHQTVLAEQGNIDTVQH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCHHH
AEATLLRTAAAKHAPEFLWDCTLVTTFEPCAMCAGTAYWANIGRVVYGASEEALLALTGN
HHHHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHCHHHHHHCCEEEECCCCCEEEEEECC
HAENPTLALPCRELLARGQKPVRVFGPVPELEAELLAPHRGFWATR
CCCCCEEECCHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHAFRHPDPSAAQIAAALHRANAVALSALALGRHPFGALLLAPDHQTVLAEQGNIDTVQH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCHHH
AEATLLRTAAAKHAPEFLWDCTLVTTFEPCAMCAGTAYWANIGRVVYGASEEALLALTGN
HHHHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHCHHHHHHCCEEEECCCCCEEEEEECC
HAENPTLALPCRELLARGQKPVRVFGPVPELEAELLAPHRGFWATR
CCCCCEEECCHHHHHHCCCCCEEEECCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA