| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265962
Identifier: 124265962
GI number: 124265962
Start: 802450
End: 803574
Strand: Reverse
Name: 124265962
Synonym: Mpe_A0769
Alternate gene names: NA
Gene position: 803574-802450 (Counterclockwise)
Preceding gene: 124265963
Following gene: 124265961
Centisome position: 19.87
GC content: 66.67
Gene sequence:
>1125_bases ATGACGCAACACGATTTCCGGGCCTCCCGCCGCCGCGCCCTGGCGCAACTGTCGGCCGCCGGCCTGGCCACCGCCTCGCC GTGGGCACTGCGCGCCGCGCAGGCCCAGACCAAGATGACCATCGGCGTGATCTACGTCGGCCCGAAGGACGACTTCGGCT ACAACCAGGCGCAGGCCGCCGCCGCGGCCGAGGTCAAGAAGCTGCCCGGCATCAAGGTCGTCGAGGAGGAGAACGTCCCT GAGACCACCGCGGTGCAGAAGACCATGACCGGCATGATCGTGCAGGACGGCGCCAAGCTGCTGTTCCCCACCTCGTTCGG CTACTTCGACCCGCACATGCTCGCGCTCGCCGCCAAGTACCCCGACGTGCGCTTCTCGCACTGCGGCGGCATGTGGACCG AGGGCAAGCACCCCAAGAACACCGGCAGCTTCTTCGGCTACATCGACGAGTGCCAGTACCTCAACGGCGTGATCGCCGGC CACATGAGCAAGAGCAAGAAGCTCGGCTTCGTGGCCGCCAAGCCGATCCCGCAGGTGCTGCGCAACATCAACGCCTTCAC GATGGGCGCGCGCTCGGTCGACCCCAAGATCACCTGCACGGTCATCTTTACCGGCGAGTGGTCGATGGCCGTCAAGGAGG CCGAGGCCACCAACAGCCTGGCCGACCAGGGTGCCGACGTGTTCACGATGCACGTCGACGGACCGAAGGTCATCGTCGAG ACCGCCGCCAAGCGCGGCAAGATGGTCTGCGGCTACCACGCCAGCCAGGCCAAGCTCGCGCCCAATGCCTACCTGACCGG CGCCGAGTGGAACTGGCTCACCGCCTACAAGACCATCATCGAGGCGGCGCAGGCCGGCAAGCCGCACCCGAACTTCCTGC GCGGCGGCCTGAAGGAAGGCTACGTGAAGATGTCGGCCTACGGCCCGATGGTGCCGGAGGCCGCGAAGACGGCCGCCGAC GGCATCAAGGCCAAGATGATCGCCGGCTCGTTCGACATCTTCACCGGCGGCCTGAAGGACAACAAGGGCGCGGTGGTCAT CCCGGCCGGCAAGGTGCTGAAGCAGACCGACCTCGAGCTCGAGAAGATGAACTACCTGGTCGAGGGTGTGGTCGGGTCGA TCTGA
Upstream 100 bases:
>100_bases TCCATCTTGTATACCAATGCGTGCACCAAGACCGGCCACGCCGGTTGCGGATGCCCCGCCCCGCTGCTGCCGTGCCATCC ACATCGAGGAAGAAGGAACC
Downstream 100 bases:
>100_bases GGTGGGCGCGGATCATGGGTGCTGATTCGCTCAGGTTCCTGCTCGTGGCGAGCGGCCGGGGCGTGGCCGGCCGGGCCAGG GGGCGCGGGTTCGGCGGCCG
Product: bmp family protein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; Outer Membrane Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Membrane Lipoprotein; Transcriptional Activator Of ComK Gene; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Lipoprotein Family Protein; Basic Membrane Protein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; Med/BMP Family Lipoprotein
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTQHDFRASRRRALAQLSAAGLATASPWALRAAQAQTKMTIGVIYVGPKDDFGYNQAQAAAAAEVKKLPGIKVVEEENVP ETTAVQKTMTGMIVQDGAKLLFPTSFGYFDPHMLALAAKYPDVRFSHCGGMWTEGKHPKNTGSFFGYIDECQYLNGVIAG HMSKSKKLGFVAAKPIPQVLRNINAFTMGARSVDPKITCTVIFTGEWSMAVKEAEATNSLADQGADVFTMHVDGPKVIVE TAAKRGKMVCGYHASQAKLAPNAYLTGAEWNWLTAYKTIIEAAQAGKPHPNFLRGGLKEGYVKMSAYGPMVPEAAKTAAD GIKAKMIAGSFDIFTGGLKDNKGAVVIPAGKVLKQTDLELEKMNYLVEGVVGSI
Sequences:
>Translated_374_residues MTQHDFRASRRRALAQLSAAGLATASPWALRAAQAQTKMTIGVIYVGPKDDFGYNQAQAAAAAEVKKLPGIKVVEEENVP ETTAVQKTMTGMIVQDGAKLLFPTSFGYFDPHMLALAAKYPDVRFSHCGGMWTEGKHPKNTGSFFGYIDECQYLNGVIAG HMSKSKKLGFVAAKPIPQVLRNINAFTMGARSVDPKITCTVIFTGEWSMAVKEAEATNSLADQGADVFTMHVDGPKVIVE TAAKRGKMVCGYHASQAKLAPNAYLTGAEWNWLTAYKTIIEAAQAGKPHPNFLRGGLKEGYVKMSAYGPMVPEAAKTAAD GIKAKMIAGSFDIFTGGLKDNKGAVVIPAGKVLKQTDLELEKMNYLVEGVVGSI >Mature_373_residues TQHDFRASRRRALAQLSAAGLATASPWALRAAQAQTKMTIGVIYVGPKDDFGYNQAQAAAAAEVKKLPGIKVVEEENVPE TTAVQKTMTGMIVQDGAKLLFPTSFGYFDPHMLALAAKYPDVRFSHCGGMWTEGKHPKNTGSFFGYIDECQYLNGVIAGH MSKSKKLGFVAAKPIPQVLRNINAFTMGARSVDPKITCTVIFTGEWSMAVKEAEATNSLADQGADVFTMHVDGPKVIVET AAKRGKMVCGYHASQAKLAPNAYLTGAEWNWLTAYKTIIEAAQAGKPHPNFLRGGLKEGYVKMSAYGPMVPEAAKTAADG IKAKMIAGSFDIFTGGLKDNKGAVVIPAGKVLKQTDLELEKMNYLVEGVVGSI
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40116; Mature: 39985
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHDFRASRRRALAQLSAAGLATASPWALRAAQAQTKMTIGVIYVGPKDDFGYNQAQAA CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHH AAAEVKKLPGIKVVEEENVPETTAVQKTMTGMIVQDGAKLLFPTSFGYFDPHMLALAAKY HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHEEECCC PDVRFSHCGGMWTEGKHPKNTGSFFGYIDECQYLNGVIAGHMSKSKKLGFVAAKPIPQVL CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHH RNINAFTMGARSVDPKITCTVIFTGEWSMAVKEAEATNSLADQGADVFTMHVDGPKVIVE HCCCCEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH TAAKRGKMVCGYHASQAKLAPNAYLTGAEWNWLTAYKTIIEAAQAGKPHPNFLRGGLKEG HHHHCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHC YVKMSAYGPMVPEAAKTAADGIKAKMIAGSFDIFTGGLKDNKGAVVIPAGKVLKQTDLEL EEEEECCCCCCCHHHHHHHCCCEEEEEECCCEEEECCCCCCCCEEEEECCHHHHHHCCHH EKMNYLVEGVVGSI HHHHHHHHHHHCCC >Mature Secondary Structure TQHDFRASRRRALAQLSAAGLATASPWALRAAQAQTKMTIGVIYVGPKDDFGYNQAQAA CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHH AAAEVKKLPGIKVVEEENVPETTAVQKTMTGMIVQDGAKLLFPTSFGYFDPHMLALAAKY HHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHEEECCC PDVRFSHCGGMWTEGKHPKNTGSFFGYIDECQYLNGVIAGHMSKSKKLGFVAAKPIPQVL CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHH RNINAFTMGARSVDPKITCTVIFTGEWSMAVKEAEATNSLADQGADVFTMHVDGPKVIVE HCCCCEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH TAAKRGKMVCGYHASQAKLAPNAYLTGAEWNWLTAYKTIIEAAQAGKPHPNFLRGGLKEG HHHHCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHC YVKMSAYGPMVPEAAKTAADGIKAKMIAGSFDIFTGGLKDNKGAVVIPAGKVLKQTDLEL EEEEECCCCCCCHHHHHHHCCCEEEEEECCCEEEECCCCCCCCEEEEECCHHHHHHCCHH EKMNYLVEGVVGSI HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA