| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is yufP [H]
Identifier: 124265961
GI number: 124265961
Start: 800744
End: 801841
Strand: Reverse
Name: yufP [H]
Synonym: Mpe_A0768
Alternate gene names: 124265961
Gene position: 801841-800744 (Counterclockwise)
Preceding gene: 124265962
Following gene: 124265960
Centisome position: 19.83
GC content: 72.95
Gene sequence:
>1098_bases ATGCGCAGCACCGCCCTCGCCGACATCCTGCTGCCGATCGGCGCGCTGGCCGCCGCGCTGCTGCTGTTCGGCGTGTTCGT GTGGTTCGGTGGCACCGACCCGGTCGAGGTCTGGGTGCTGCTGTTCAAGGGCGCCTTCGGCGACTGGTTCTCGTGGCAGA ACACGCTGCAGCGCGCCGCGCCGCTGATGCTCACTGCGCTGTGCGTCGCGCTGCCGGCGCGTGCCGGCCTGGTGATCATC GGCGGCGAAGGTGCGCTGGTGCTCGGCGGCCTGGCCGCAGCGGCGCTGCCTTACGCGGTGCCGCTGCCGGGCAACGTGAT CGGCACCGTGCTGGTCTGCGCGGCCGGCATGGCGGCCGGCGCCGCGTGGATCGCGCTGGCCGGTGCGCTGCGGCAGTACC GCGGCGTCAACGAGACCATCAGCAGCCTGCTGCTCGCCTACATCGCGATCGCACTGTTCAAGCAGATCGTCGAGGGCCCG CTGCGTGACCCGGCCACGCTGAACAAGCCGTCCACGCGCGCGCTGGACGAAGGCATCCGCATCGGCGGCATGTTCGGCTC CGACGTGCACTGGGGCCTGGTGCTGGGCCTGCTGGCCTGCGCGGTGCTGGGCCTGTGGCTCGCGCTCACCGCGCGCGGCT TCGCGGTGCGCGTGGTCGGCGGCAACCCGCGCACCGCGCAGTTGGTGGGCCTGCCGGCCAGCGGGCTGATCCTGATCGCC TGCGCGATCGGCGGCGCCTGCGCCGGGCTGGCCGGCGCGATCGAGGTGGCCGCGGTGCACACCAATGCCAACGCTTCCAT CATCGCCGGCTACGGCTACGCGGGCATCCTGGTGAGCTTCATCGCACGGCACAACCCGATCGCCGTGATCCCGGTCGCCA TCCTGTTCGGTGGCTTCGGCGCGGCCGGCAGCCTGCTGCAGCGCCGGCTCGATCTGCCCGACGCCTCGGTGCAGGTGCTG CAGGGCATCGCCTTCGTGCTGATCCTCGCCAGCGAGGCGCTGCGCGGCATCGACTGGCGCGCCGCCGCGGTGAAGCTCAG GCCCCCGGCCGGGCCGGCGGCGCCGGTGCAGTTGAAGGTCGAGGGCGGGGGAACGTGA
Upstream 100 bases:
>100_bases CGCAGTCGGCGCAGCGCGCCGACCGCACCCCATCACCGCCCCGGCGCCCACCGCCTGCCGCGCCAGCGCGCACCACTGAC CGCCACAGGAGTCGACCGCC
Downstream 100 bases:
>100_bases TGATGACCATGACGAGGAAGCAGCGGGCGATCGAGCACACGGGAGCCACGTCATGAGCGACACCCTGATCGCCTTCTCCG CCGCCATCCTCGGCGGCGCC
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MRSTALADILLPIGALAAALLLFGVFVWFGGTDPVEVWVLLFKGAFGDWFSWQNTLQRAAPLMLTALCVALPARAGLVII GGEGALVLGGLAAAALPYAVPLPGNVIGTVLVCAAGMAAGAAWIALAGALRQYRGVNETISSLLLAYIAIALFKQIVEGP LRDPATLNKPSTRALDEGIRIGGMFGSDVHWGLVLGLLACAVLGLWLALTARGFAVRVVGGNPRTAQLVGLPASGLILIA CAIGGACAGLAGAIEVAAVHTNANASIIAGYGYAGILVSFIARHNPIAVIPVAILFGGFGAAGSLLQRRLDLPDASVQVL QGIAFVLILASEALRGIDWRAAAVKLRPPAGPAAPVQLKVEGGGT
Sequences:
>Translated_365_residues MRSTALADILLPIGALAAALLLFGVFVWFGGTDPVEVWVLLFKGAFGDWFSWQNTLQRAAPLMLTALCVALPARAGLVII GGEGALVLGGLAAAALPYAVPLPGNVIGTVLVCAAGMAAGAAWIALAGALRQYRGVNETISSLLLAYIAIALFKQIVEGP LRDPATLNKPSTRALDEGIRIGGMFGSDVHWGLVLGLLACAVLGLWLALTARGFAVRVVGGNPRTAQLVGLPASGLILIA CAIGGACAGLAGAIEVAAVHTNANASIIAGYGYAGILVSFIARHNPIAVIPVAILFGGFGAAGSLLQRRLDLPDASVQVL QGIAFVLILASEALRGIDWRAAAVKLRPPAGPAAPVQLKVEGGGT >Mature_365_residues MRSTALADILLPIGALAAALLLFGVFVWFGGTDPVEVWVLLFKGAFGDWFSWQNTLQRAAPLMLTALCVALPARAGLVII GGEGALVLGGLAAAALPYAVPLPGNVIGTVLVCAAGMAAGAAWIALAGALRQYRGVNETISSLLLAYIAIALFKQIVEGP LRDPATLNKPSTRALDEGIRIGGMFGSDVHWGLVLGLLACAVLGLWLALTARGFAVRVVGGNPRTAQLVGLPASGLILIA CAIGGACAGLAGAIEVAAVHTNANASIIAGYGYAGILVSFIARHNPIAVIPVAILFGGFGAAGSLLQRRLDLPDASVQVL QGIAFVLILASEALRGIDWRAAAVKLRPPAGPAAPVQLKVEGGGT
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 37062; Mature: 37062
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTALADILLPIGALAAALLLFGVFVWFGGTDPVEVWVLLFKGAFGDWFSWQNTLQRAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH PLMLTALCVALPARAGLVIIGGEGALVLGGLAAAALPYAVPLPGNVIGTVLVCAAGMAAG HHHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AAWIALAGALRQYRGVNETISSLLLAYIAIALFKQIVEGPLRDPATLNKPSTRALDEGIR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCE IGGMFGSDVHWGLVLGLLACAVLGLWLALTARGFAVRVVGGNPRTAQLVGLPASGLILIA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHH CAIGGACAGLAGAIEVAAVHTNANASIIAGYGYAGILVSFIARHNPIAVIPVAILFGGFG HHHHHHHHHHHHHHEEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCC AAGSLLQRRLDLPDASVQVLQGIAFVLILASEALRGIDWRAAAVKLRPPAGPAAPVQLKV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEE EGGGT CCCCC >Mature Secondary Structure MRSTALADILLPIGALAAALLLFGVFVWFGGTDPVEVWVLLFKGAFGDWFSWQNTLQRAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH PLMLTALCVALPARAGLVIIGGEGALVLGGLAAAALPYAVPLPGNVIGTVLVCAAGMAAG HHHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AAWIALAGALRQYRGVNETISSLLLAYIAIALFKQIVEGPLRDPATLNKPSTRALDEGIR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCE IGGMFGSDVHWGLVLGLLACAVLGLWLALTARGFAVRVVGGNPRTAQLVGLPASGLILIA ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHH CAIGGACAGLAGAIEVAAVHTNANASIIAGYGYAGILVSFIARHNPIAVIPVAILFGGFG HHHHHHHHHHHHHHEEEEEEECCCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCC AAGSLLQRRLDLPDASVQVLQGIAFVLILASEALRGIDWRAAAVKLRPPAGPAAPVQLKV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEE EGGGT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]