| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is rutB [H]
Identifier: 124265957
GI number: 124265957
Start: 796776
End: 797465
Strand: Reverse
Name: rutB [H]
Synonym: Mpe_A0764
Alternate gene names: 124265957
Gene position: 797465-796776 (Counterclockwise)
Preceding gene: 124265958
Following gene: 124265955
Centisome position: 19.72
GC content: 73.19
Gene sequence:
>690_bases ATGAGCACGAGCACCAGCATGAGCATCAGCATCCCCGCCGCCCCGTTCGACTACCGCCTGGCACCCGGCGCCACCGCGCT GGTCGTGATCGACATGCAGCGCGACTTCATCGAGCCCGGCGGCTTCGGCGCCTCGCTCGGCAACGACGTCTCGCTGCTGG TGCCGGCCATCGCGCCGATCGCCGCGCTGCTGGCGGCGTGGCGCGCGCGCGGCTGGCCGGTGGTGCACACCCGCGAGGCG CACAAGGCCGACCTGAGCGACTGCCCGCCGGCCAAGCGCCTGCGCGGCGCGCCCACGCTGCGCATCGGCGACCCGGGGCC GATGGGCCGGCTGCTGATCAGCGGCGAGCCCGGCACCGAGATCATCGCGGCGCTGGCGCCGCAGCCCGGCGAGATCGTGA TCGACAAGCCCGGCAAGGGCATGTTCTGGGCCACCGGCCTGCACGAGCGGCTGCAGGCGCTGGGCGTGAGCCACCTGGTG TTCACCGGCGTGACCACCGAGGTCTGCGTGCAGACCTCGATGCGCGAGGCCAACGACCGCGGCTACGACGGCCTGCTGGT GGAAGACGGCACCGAGAGCTACTTCCCGGCCTACAAGGCCGCGGTACTGGAGATGATCGCGGCGCAGGGCGCCATCGTCG GCTGGCACGCGCCGAGCGCGGCGGTGCTGGCGGCGTTGCCGGAGGCTTGA
Upstream 100 bases:
>100_bases TGTTCGAGACGCCGGCCGCCGACGTGGACCGCCACACCATCGGCGCGCACATGGGCGGCGGCGCCGACCACGGGCACGCC CAGCCGCTGCCGGAGGCCGC
Downstream 100 bases:
>100_bases GTCGTTCGTCGTGACTGGTTCGGTCGACGGGGGGCCGGCCTGTATTGCTGGGGTTCGCTGTCTGCGACGGGGGGTCGGTC GGTGCGGCAAAGGCGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Ureidoacrylate amidohydrolase [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSTSTSMSISIPAAPFDYRLAPGATALVVIDMQRDFIEPGGFGASLGNDVSLLVPAIAPIAALLAAWRARGWPVVHTREA HKADLSDCPPAKRLRGAPTLRIGDPGPMGRLLISGEPGTEIIAALAPQPGEIVIDKPGKGMFWATGLHERLQALGVSHLV FTGVTTEVCVQTSMREANDRGYDGLLVEDGTESYFPAYKAAVLEMIAAQGAIVGWHAPSAAVLAALPEA
Sequences:
>Translated_229_residues MSTSTSMSISIPAAPFDYRLAPGATALVVIDMQRDFIEPGGFGASLGNDVSLLVPAIAPIAALLAAWRARGWPVVHTREA HKADLSDCPPAKRLRGAPTLRIGDPGPMGRLLISGEPGTEIIAALAPQPGEIVIDKPGKGMFWATGLHERLQALGVSHLV FTGVTTEVCVQTSMREANDRGYDGLLVEDGTESYFPAYKAAVLEMIAAQGAIVGWHAPSAAVLAALPEA >Mature_228_residues STSTSMSISIPAAPFDYRLAPGATALVVIDMQRDFIEPGGFGASLGNDVSLLVPAIAPIAALLAAWRARGWPVVHTREAH KADLSDCPPAKRLRGAPTLRIGDPGPMGRLLISGEPGTEIIAALAPQPGEIVIDKPGKGMFWATGLHERLQALGVSHLVF TGVTTEVCVQTSMREANDRGYDGLLVEDGTESYFPAYKAAVLEMIAAQGAIVGWHAPSAAVLAALPEA
Specific function: In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby rele
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family. RutB subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081820, Length=213, Percent_Identity=31.924882629108, Blast_Score=103, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019916 - InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: NA
Molecular weight: Translated: 23959; Mature: 23828
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSTSMSISIPAAPFDYRLAPGATALVVIDMQRDFIEPGGFGASLGNDVSLLVPAIAPI CCCCCCEEEEECCCCCCEEECCCCEEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHH AALLAAWRARGWPVVHTREAHKADLSDCPPAKRLRGAPTLRIGDPGPMGRLLISGEPGTE HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCEEEECCCCCHH IIAALAPQPGEIVIDKPGKGMFWATGLHERLQALGVSHLVFTGVTTEVCVQTSMREANDR HHEEECCCCCEEEEECCCCCCEEECCHHHHHHHHCCHHHEECCCHHHHHHHHHHHHCCCC GYDGLLVEDGTESYFPAYKAAVLEMIAAQGAIVGWHAPSAAVLAALPEA CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHEECCCC >Mature Secondary Structure STSTSMSISIPAAPFDYRLAPGATALVVIDMQRDFIEPGGFGASLGNDVSLLVPAIAPI CCCCCEEEEECCCCCCEEECCCCEEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHH AALLAAWRARGWPVVHTREAHKADLSDCPPAKRLRGAPTLRIGDPGPMGRLLISGEPGTE HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCEEEECCCCCHH IIAALAPQPGEIVIDKPGKGMFWATGLHERLQALGVSHLVFTGVTTEVCVQTSMREANDR HHEEECCCCCEEEEECCCCCCEEECCHHHHHHHHCCHHHEECCCHHHHHHHHHHHHCCCC GYDGLLVEDGTESYFPAYKAAVLEMIAAQGAIVGWHAPSAAVLAALPEA CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA