| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265955
Identifier: 124265955
GI number: 124265955
Start: 792718
End: 793398
Strand: Reverse
Name: 124265955
Synonym: Mpe_A0762
Alternate gene names: NA
Gene position: 793398-792718 (Counterclockwise)
Preceding gene: 124265957
Following gene: 124265954
Centisome position: 19.62
GC content: 72.1
Gene sequence:
>681_bases ATGCGCACCACCCCACCCCGTTTCGACATCTACGCACCCATCCACAAGGCGCTGCGCCTGTTCATGACCGACACGCTGCA GCGCCTGGGCCGGCTGGACCTGGACGACCCGCAGGACCTGGCGGCCGGCCTGGGCCAGCTGGACACGCTGCTGGGCGCCG CGAGCAGCCACCTGCAGCACGAGAACGATTGCATCCACCCGGCCCTCGAGTTGCAGCAGGCCGGCGCCAGCCAGCGCATC GCCGGCGAACACCGCGAGCACCTCGACATCATCGCCACGCTGCGCGCGCACGCCGCCGCGCTGCGTGCCGCGCCCGAAGC CGCGACGGCACACCGGCTGTACCGCCAGCTGGCCGCCTTCGTGGCCGAGAACTTCGAGCACATGGACATGGAGGAGACCC GCCACAACCAGGCGCTGTGGGCCGGCTACAGCGATGCCGAACTGCAGGCGATCGAGCACCGCATCCTGGCCGGCATCGGC CCGCAGGAAATGAGCCTGTGGCTGCGCTGGCTGATCCTGGCGCTCAACCCTACGGAGCGCGCGCAGCTGATCGCCGGCCT GCCGCCCGCGGCCCGCGAGCCGGTGCTGGACTCGGCGCGCGCGCTGCTGGACGATGGGGCGTGGGGCAAGCTCTGCAGGG CGCTGGGGCGGAAGGTGGCGCCGGGCCTGGTGGAGGCTTGA
Upstream 100 bases:
>100_bases CGGCGATGGCGCCATGGCTCTCCGGAGCGATGCCGGCGCGGCGGTGGCTCGCAACACTGGCGGCTCCTTCCTTCATTCCT TCTTCTGACGGACCCCCATC
Downstream 100 bases:
>100_bases GGGAGCGGCAACACCGCGAACCCATGCGCGGGGATCGAGCAGCGAGTCATTGCTGCAGGGCGACGCGATCTTCGAGTAAC CTGAGCGAATGGTTCGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MRTTPPRFDIYAPIHKALRLFMTDTLQRLGRLDLDDPQDLAAGLGQLDTLLGAASSHLQHENDCIHPALELQQAGASQRI AGEHREHLDIIATLRAHAAALRAAPEAATAHRLYRQLAAFVAENFEHMDMEETRHNQALWAGYSDAELQAIEHRILAGIG PQEMSLWLRWLILALNPTERAQLIAGLPPAAREPVLDSARALLDDGAWGKLCRALGRKVAPGLVEA
Sequences:
>Translated_226_residues MRTTPPRFDIYAPIHKALRLFMTDTLQRLGRLDLDDPQDLAAGLGQLDTLLGAASSHLQHENDCIHPALELQQAGASQRI AGEHREHLDIIATLRAHAAALRAAPEAATAHRLYRQLAAFVAENFEHMDMEETRHNQALWAGYSDAELQAIEHRILAGIG PQEMSLWLRWLILALNPTERAQLIAGLPPAAREPVLDSARALLDDGAWGKLCRALGRKVAPGLVEA >Mature_226_residues MRTTPPRFDIYAPIHKALRLFMTDTLQRLGRLDLDDPQDLAAGLGQLDTLLGAASSHLQHENDCIHPALELQQAGASQRI AGEHREHLDIIATLRAHAAALRAAPEAATAHRLYRQLAAFVAENFEHMDMEETRHNQALWAGYSDAELQAIEHRILAGIG PQEMSLWLRWLILALNPTERAQLIAGLPPAAREPVLDSARALLDDGAWGKLCRALGRKVAPGLVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24877; Mature: 24877
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTPPRFDIYAPIHKALRLFMTDTLQRLGRLDLDDPQDLAAGLGQLDTLLGAASSHLQH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC ENDCIHPALELQQAGASQRIAGEHREHLDIIATLRAHAAALRAAPEAATAHRLYRQLAAF CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VAENFEHMDMEETRHNQALWAGYSDAELQAIEHRILAGIGPQEMSLWLRWLILALNPTER HHHCHHHCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH AQLIAGLPPAAREPVLDSARALLDDGAWGKLCRALGRKVAPGLVEA HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRTTPPRFDIYAPIHKALRLFMTDTLQRLGRLDLDDPQDLAAGLGQLDTLLGAASSHLQH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC ENDCIHPALELQQAGASQRIAGEHREHLDIIATLRAHAAALRAAPEAATAHRLYRQLAAF CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VAENFEHMDMEETRHNQALWAGYSDAELQAIEHRILAGIGPQEMSLWLRWLILALNPTER HHHCHHHCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH AQLIAGLPPAAREPVLDSARALLDDGAWGKLCRALGRKVAPGLVEA HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA