| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265951
Identifier: 124265951
GI number: 124265951
Start: 785632
End: 787671
Strand: Direct
Name: 124265951
Synonym: Mpe_A0758
Alternate gene names: NA
Gene position: 785632-787671 (Clockwise)
Preceding gene: 124265950
Following gene: 124265952
Centisome position: 19.43
GC content: 68.04
Gene sequence:
>2040_bases ATGCTCCGCTGGTTCTTCTTGGCCCTGATAGCCGGGTTCATGTCCACGCCGGCCCCCGCCGAGGTGGTCGCGATCGAGGT CACGGACCAGCGGCCTTGGATACCGGGTCGTGCCTTTGGCGCCGGAGAATACGAGCTGCTGACGGGCCGGGTGCGCTACG AAATTGACCCCGCCGCGGCCTCGTCCCGTGATGTCGCCGACATCCATCTCGCGCCGCGCAATGCCCGGGGCAAGGTCGAG TTTCATGGCCCCTTCCTGCTGCTGCGTCCGCGCGACGCCGCCAGGGCCAACGGGACCACCGTCTTCGAGTTCGCCAATCG CGGCCGCGATCAATCGAATGGTCTGCTGTTCCAGGCCGACAGCTTCGCCCTCAGCAGGAACGAGACGCGTGAAGTCTCGC GCTCGACCCTGTTCGACATGGGCTACACCTTGGCATGGGCCGGGTGGCAGGGCGACCTGCAGGCCGACGAATTCGGTCTG ACCGTACCGTCTGTGCCGGTCACGGGATCCGTCCGGGCGGCCGCCTTCCTGGGTTGGGGCCCTGGTCGACGCGATGGCGG CGACTTCGATCAAGAAGCCCCCTGCGTGCTCGAAGGCGCCGAGTCAAGCGCCGTGCTGCGCACCCACCGCAGCCTGGAAG ATCCGGGAGAGGTCATGCCCCGCGCTGCGTGGCGGTTCGCCAGGAGGGCGGCAGATGGTCGCGTCGTTGATGACCGGTGC GCCTTTGTCCTCGCAACCCCGGTCGATCGACCGACGCTGGTGACCATCGTCTTCACCGCCGGGCCGGCCAAGGTGATGGG GCTGGGGCAGGCCGCCTTGCGCGACTTTGCCTCCCACCTGAAGCATGGCGACACCGTCAGCGCGCTGAACCGTCATCCGG CCTATGCGCGCCGAGTGATCGGCTACGGGTACTCGCAAGGCGGGCGGTTGATCCGCGACTTCCTCTACCGGGGCTTCAAT GCCGACGCACGAGGGCGTCGCGTGCTGGATGGTGTGCTCGACACGGCCAGCGGCGCGGGCCGCGGCTCCTTCAACCACCG CTATGCACTGCCAGGAGAGGCAGGTAACTCGGTGAGGAGCCACTTGCGAGCCGTCGACCTTTATCCCTTCGCCGACCTGC CAACGCCGGACATCGCCGGGCCAGGCCCCGCAGAAGGCTTGCTGGACCGCGCGCGTCGGGATGGGGTTCAGCCGCGCCTG TTCCATGTGCTCAACTCGACGGAATACTGGGCGAGGGCGGGCTCTCTGCTTCACACCACCGTGGATGGCCGCCAGCCTGT GCCCGAGGCCGAGGGCACACGCACTTATGCCTTCGCCGGGACCGCGCACGCACCCCAGGCATCGACCTTGTTCCTGGAAA GCAGCGACCGCGCAGCGTTACCCTACAACGACAACGACGATCTGGCGTTGGCGCTGCCCGCCTTGTTGGTGGGCCTCGAC CGGTGGATCTCGGCGGGTGCGGAGCCACCGCCGTCCACGCACCCGCGTTGGGGGTCCACGCTGGTACCGCCCGACAAGCT CAGGTTTCCAGCGATTCCGGGTGTTGTCGTGCCCACCGCCCCGCCGCCGAGGTACCAGCTCGATCTTGGGCGCGATTACC GATCGCAGGGCGTCATCACCGAGCCTCCACAGGTCGGCCCGCCGTATGTGCTGCTGGTGCCGCAGGTCGATGCGGATGGC AATGAACTCGGCGCCTGGTGCGGCCTTGCGCAGTCGGTCCCGCTTGGCACCTACACGGCCTGGAATCCGCGGGATGCGGC GCTGCTGCCCTTCGGCTTCATCTCGGGGCTGAGGGGGGCGTTCATTCCGTTTCCGGCCACGGCCGCAGCAGGTGCCCGCG CCAAGGACCCGCGGCGGTCGATTGCCGAGCGCTACGTTGGGGTGGACGGGTACATGGCGATGGTTGAGCATGCAATCGAG GCGCAAGTCGCCGCTGGCTTCCTGCTCCCGCAGGATCGCGAGCAGGCCCGCACCACCATGCGGACATACTGGGACCGGGT GGCCCGGCTGCGGTTTCATTGGCCTCCGCGTGTGCCATGA
Upstream 100 bases:
>100_bases CGGCTTTTGACGACAATGATGGCCGTTGACGCTCGCCGTCATTGTCCGATGTCGACGTGGTTCTCGGCACCCGCTTGCCG TGCCGTGTTGGAAAGCGCCG
Downstream 100 bases:
>100_bases GGTCCCGAGGGTCCCGAGGCTGCGGCGTCATGGCACCCTTGACCGGGTTGCGGGCCGGCGAACCGCTTCTTGGACGCTGC TGTAGGCACGCAAGCGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MLRWFFLALIAGFMSTPAPAEVVAIEVTDQRPWIPGRAFGAGEYELLTGRVRYEIDPAAASSRDVADIHLAPRNARGKVE FHGPFLLLRPRDAARANGTTVFEFANRGRDQSNGLLFQADSFALSRNETREVSRSTLFDMGYTLAWAGWQGDLQADEFGL TVPSVPVTGSVRAAAFLGWGPGRRDGGDFDQEAPCVLEGAESSAVLRTHRSLEDPGEVMPRAAWRFARRAADGRVVDDRC AFVLATPVDRPTLVTIVFTAGPAKVMGLGQAALRDFASHLKHGDTVSALNRHPAYARRVIGYGYSQGGRLIRDFLYRGFN ADARGRRVLDGVLDTASGAGRGSFNHRYALPGEAGNSVRSHLRAVDLYPFADLPTPDIAGPGPAEGLLDRARRDGVQPRL FHVLNSTEYWARAGSLLHTTVDGRQPVPEAEGTRTYAFAGTAHAPQASTLFLESSDRAALPYNDNDDLALALPALLVGLD RWISAGAEPPPSTHPRWGSTLVPPDKLRFPAIPGVVVPTAPPPRYQLDLGRDYRSQGVITEPPQVGPPYVLLVPQVDADG NELGAWCGLAQSVPLGTYTAWNPRDAALLPFGFISGLRGAFIPFPATAAAGARAKDPRRSIAERYVGVDGYMAMVEHAIE AQVAAGFLLPQDREQARTTMRTYWDRVARLRFHWPPRVP
Sequences:
>Translated_679_residues MLRWFFLALIAGFMSTPAPAEVVAIEVTDQRPWIPGRAFGAGEYELLTGRVRYEIDPAAASSRDVADIHLAPRNARGKVE FHGPFLLLRPRDAARANGTTVFEFANRGRDQSNGLLFQADSFALSRNETREVSRSTLFDMGYTLAWAGWQGDLQADEFGL TVPSVPVTGSVRAAAFLGWGPGRRDGGDFDQEAPCVLEGAESSAVLRTHRSLEDPGEVMPRAAWRFARRAADGRVVDDRC AFVLATPVDRPTLVTIVFTAGPAKVMGLGQAALRDFASHLKHGDTVSALNRHPAYARRVIGYGYSQGGRLIRDFLYRGFN ADARGRRVLDGVLDTASGAGRGSFNHRYALPGEAGNSVRSHLRAVDLYPFADLPTPDIAGPGPAEGLLDRARRDGVQPRL FHVLNSTEYWARAGSLLHTTVDGRQPVPEAEGTRTYAFAGTAHAPQASTLFLESSDRAALPYNDNDDLALALPALLVGLD RWISAGAEPPPSTHPRWGSTLVPPDKLRFPAIPGVVVPTAPPPRYQLDLGRDYRSQGVITEPPQVGPPYVLLVPQVDADG NELGAWCGLAQSVPLGTYTAWNPRDAALLPFGFISGLRGAFIPFPATAAAGARAKDPRRSIAERYVGVDGYMAMVEHAIE AQVAAGFLLPQDREQARTTMRTYWDRVARLRFHWPPRVP >Mature_679_residues MLRWFFLALIAGFMSTPAPAEVVAIEVTDQRPWIPGRAFGAGEYELLTGRVRYEIDPAAASSRDVADIHLAPRNARGKVE FHGPFLLLRPRDAARANGTTVFEFANRGRDQSNGLLFQADSFALSRNETREVSRSTLFDMGYTLAWAGWQGDLQADEFGL TVPSVPVTGSVRAAAFLGWGPGRRDGGDFDQEAPCVLEGAESSAVLRTHRSLEDPGEVMPRAAWRFARRAADGRVVDDRC AFVLATPVDRPTLVTIVFTAGPAKVMGLGQAALRDFASHLKHGDTVSALNRHPAYARRVIGYGYSQGGRLIRDFLYRGFN ADARGRRVLDGVLDTASGAGRGSFNHRYALPGEAGNSVRSHLRAVDLYPFADLPTPDIAGPGPAEGLLDRARRDGVQPRL FHVLNSTEYWARAGSLLHTTVDGRQPVPEAEGTRTYAFAGTAHAPQASTLFLESSDRAALPYNDNDDLALALPALLVGLD RWISAGAEPPPSTHPRWGSTLVPPDKLRFPAIPGVVVPTAPPPRYQLDLGRDYRSQGVITEPPQVGPPYVLLVPQVDADG NELGAWCGLAQSVPLGTYTAWNPRDAALLPFGFISGLRGAFIPFPATAAAGARAKDPRRSIAERYVGVDGYMAMVEHAIE AQVAAGFLLPQDREQARTTMRTYWDRVARLRFHWPPRVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73791; Mature: 73791
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRWFFLALIAGFMSTPAPAEVVAIEVTDQRPWIPGRAFGAGEYELLTGRVRYEIDPAAA CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECEEEEEECCCCC SSRDVADIHLAPRNARGKVEFHGPFLLLRPRDAARANGTTVFEFANRGRDQSNGLLFQAD CCCCCEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCEEEEHHHCCCCCCCCEEEEEC SFALSRNETREVSRSTLFDMGYTLAWAGWQGDLQADEFGLTVPSVPVTGSVRAAAFLGWG CCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC PGRRDGGDFDQEAPCVLEGAESSAVLRTHRSLEDPGEVMPRAAWRFARRAADGRVVDDRC CCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCC AFVLATPVDRPTLVTIVFTAGPAKVMGLGQAALRDFASHLKHGDTVSALNRHPAYARRVI EEEEECCCCCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH GYGYSQGGRLIRDFLYRGFNADARGRRVLDGVLDTASGAGRGSFNHRYALPGEAGNSVRS HCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHH HLRAVDLYPFADLPTPDIAGPGPAEGLLDRARRDGVQPRLFHVLNSTEYWARAGSLLHTT HHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCEEEEE VDGRQPVPEAEGTRTYAFAGTAHAPQASTLFLESSDRAALPYNDNDDLALALPALLVGLD CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHH RWISAGAEPPPSTHPRWGSTLVPPDKLRFPAIPGVVVPTAPPPRYQLDLGRDYRSQGVIT HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCHHCCCCCC EPPQVGPPYVLLVPQVDADGNELGAWCGLAQSVPLGTYTAWNPRDAALLPFGFISGLRGA CCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCEEECHHHHHCCCCC FIPFPATAAAGARAKDPRRSIAERYVGVDGYMAMVEHAIEAQVAAGFLLPQDREQARTTM CCCCCCHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RTYWDRVARLRFHWPPRVP HHHHHHHHHEEECCCCCCC >Mature Secondary Structure MLRWFFLALIAGFMSTPAPAEVVAIEVTDQRPWIPGRAFGAGEYELLTGRVRYEIDPAAA CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECEEEEEECCCCC SSRDVADIHLAPRNARGKVEFHGPFLLLRPRDAARANGTTVFEFANRGRDQSNGLLFQAD CCCCCEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCEEEEHHHCCCCCCCCEEEEEC SFALSRNETREVSRSTLFDMGYTLAWAGWQGDLQADEFGLTVPSVPVTGSVRAAAFLGWG CCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC PGRRDGGDFDQEAPCVLEGAESSAVLRTHRSLEDPGEVMPRAAWRFARRAADGRVVDDRC CCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCC AFVLATPVDRPTLVTIVFTAGPAKVMGLGQAALRDFASHLKHGDTVSALNRHPAYARRVI EEEEECCCCCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHH GYGYSQGGRLIRDFLYRGFNADARGRRVLDGVLDTASGAGRGSFNHRYALPGEAGNSVRS HCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHH HLRAVDLYPFADLPTPDIAGPGPAEGLLDRARRDGVQPRLFHVLNSTEYWARAGSLLHTT HHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCEEEEE VDGRQPVPEAEGTRTYAFAGTAHAPQASTLFLESSDRAALPYNDNDDLALALPALLVGLD CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHH RWISAGAEPPPSTHPRWGSTLVPPDKLRFPAIPGVVVPTAPPPRYQLDLGRDYRSQGVIT HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCHHCCCCCC EPPQVGPPYVLLVPQVDADGNELGAWCGLAQSVPLGTYTAWNPRDAALLPFGFISGLRGA CCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCEECCCCCCCEEECHHHHHCCCCC FIPFPATAAAGARAKDPRRSIAERYVGVDGYMAMVEHAIEAQVAAGFLLPQDREQARTTM CCCCCCHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RTYWDRVARLRFHWPPRVP HHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA