| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is flp [H]
Identifier: 124265952
GI number: 124265952
Start: 788366
End: 789862
Strand: Direct
Name: flp [H]
Synonym: Mpe_A0759
Alternate gene names: 124265952
Gene position: 788366-789862 (Clockwise)
Preceding gene: 124265951
Following gene: 124265956
Centisome position: 19.49
GC content: 69.21
Gene sequence:
>1497_bases ATGTTCGACACAGATCAGGCTGCGGGCGCAGTGACCAGAGGCGCCGCGCGGCCCGCGTTGCTGCTGGCAGCAGCTGTGCT GGCCTTCTTCACATCGGCCGCGCAGCCGCAGCCGCAGACTTCAGCCGCGTCGACCTTCGAGACAGACACTGAGCTGCAGG CCGCGACACGGCTCTTCTCCGCTTGGCTGGAAGGCCACATGGCCCAGCGCGGCACGCCGGGTGTCATGGTCGGCGTCGTG CATGACCAGCAGCTGGTCTGGCACAAAGGCTTCGGCTTTGCCGATGTCGCGTCTCAGCGGCCCATGACCGCGCAGACCCG CTTCCGCATGGCCTCGCACTCCAAGATGCTCACCGCCATCGCCGTCATGCAACTGCGTGAAGAGGGCCGGCTGCGGCTGG ACGACCCGGTGGCCCAGCACCTGCCGTGGTTCAAGCTGAAGCCGGCGGGCGACGACGACGGGCCTGTCACGATCGAACAG CTGCTGTCGCACAGCTCGGGCTTGCCGCGCGAAGCCAGCGACCACTGGACCTCGCTGCAGTTCCCCAGCCGCAGCGAGTT GCAGGCGCTGATGGCGCAGAGACAGTCGACCTTCGCGCCGCAGGTGCGCTGGAAGTACTCGAATCTGGCCTACGGCGTGG CCGGCCAGGTGGTGGAGCAGCTCAGCGGACAACCGTTCGCCAGCTACGCGCAGGCCCACATCCTGGGCCCGCTGGGCATG CAGGACTCCAGCTACGACCAGGACGTGCCGGGCCTGGCCACGCCCTACGGCCGGCGCCTGCCGGACGGCACGCGTGTGAG CTTCCCCTTCGTCGATGCGCGTGGCCTGGCTGCTGCCACCGGCCTGACCTCGACGCTCGACGACATGGTGAAGTTCGTCT CGGCCCAGTTCCGGCGCGGCCCGCGTGGCGGCACGCAGATCATCAGCAGCGGCTCCCTCCGTGAGATGCACCGCGTGCGG TCCGTGGACGAGAATTGGTCCGTTGGCACCGGCCTGGGCTTTCTGACCACGCGCATCAACAACAAGAGCTACGTCGGCCA CGGCGGCGGCTACCCCGGCTACACGACGCAGACGCTGTTCCACCTTGGCGACAAGCTCGGCGTCATCGTGCTCACCAACA GCGCCGATTCGGGCGTGAACGACATCGCCCGCCAGGCGATTGCGGCCTTTGGCCCGCCGGTGGCGAAAGTCGCCGCCGCA GGCGCGACCACCCCCGCCTGGGACCCGGCCTGGGCGCGTTTCCAGGGCATGTACCGCAGCCGCGGCGGCGACACCTTTGT GGTCATGCTGAACAAGCGGCTGGTGCTGCTGGGCGCGTCGGCGGCGGGCATCGATGCCGCCACCCGGCTGGAGCCGCTCG GCAACGGCCACTTCCGGCTCGACAGCGCCACAGGGGGGCCGCCGGTCGGCGAGGTGGTGTACTTTCAGGAGGGCAGCGGC AAGCCCATGCGCATGGTCGTGGGCGACAACACGTCGGAGCGCATCGCGGCGCCTTAG
Upstream 100 bases:
>100_bases CGACGACTCGTACGGGGCTCGTGCGCTTGCGGCAGCCGATCGGAAACGCGTCGTATACGCTCCGTGCCTGTCGCATGCCG GGCATGCATCTGGGGACCAC
Downstream 100 bases:
>100_bases TCCGGCTGTTAACTGAGCGGCGCCGGCATCCGGCAGGTGACTTCCGAAGGATGAAATGCCGGTCAGCCGGCTCAGCCGGC TCAGCCGCCGTACGGCTGCC
Product: putative beta-lactamase class C penicillin binding protein
Products: NA
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MFDTDQAAGAVTRGAARPALLLAAAVLAFFTSAAQPQPQTSAASTFETDTELQAATRLFSAWLEGHMAQRGTPGVMVGVV HDQQLVWHKGFGFADVASQRPMTAQTRFRMASHSKMLTAIAVMQLREEGRLRLDDPVAQHLPWFKLKPAGDDDGPVTIEQ LLSHSSGLPREASDHWTSLQFPSRSELQALMAQRQSTFAPQVRWKYSNLAYGVAGQVVEQLSGQPFASYAQAHILGPLGM QDSSYDQDVPGLATPYGRRLPDGTRVSFPFVDARGLAAATGLTSTLDDMVKFVSAQFRRGPRGGTQIISSGSLREMHRVR SVDENWSVGTGLGFLTTRINNKSYVGHGGGYPGYTTQTLFHLGDKLGVIVLTNSADSGVNDIARQAIAAFGPPVAKVAAA GATTPAWDPAWARFQGMYRSRGGDTFVVMLNKRLVLLGASAAGIDAATRLEPLGNGHFRLDSATGGPPVGEVVYFQEGSG KPMRMVVGDNTSERIAAP
Sequences:
>Translated_498_residues MFDTDQAAGAVTRGAARPALLLAAAVLAFFTSAAQPQPQTSAASTFETDTELQAATRLFSAWLEGHMAQRGTPGVMVGVV HDQQLVWHKGFGFADVASQRPMTAQTRFRMASHSKMLTAIAVMQLREEGRLRLDDPVAQHLPWFKLKPAGDDDGPVTIEQ LLSHSSGLPREASDHWTSLQFPSRSELQALMAQRQSTFAPQVRWKYSNLAYGVAGQVVEQLSGQPFASYAQAHILGPLGM QDSSYDQDVPGLATPYGRRLPDGTRVSFPFVDARGLAAATGLTSTLDDMVKFVSAQFRRGPRGGTQIISSGSLREMHRVR SVDENWSVGTGLGFLTTRINNKSYVGHGGGYPGYTTQTLFHLGDKLGVIVLTNSADSGVNDIARQAIAAFGPPVAKVAAA GATTPAWDPAWARFQGMYRSRGGDTFVVMLNKRLVLLGASAAGIDAATRLEPLGNGHFRLDSATGGPPVGEVVYFQEGSG KPMRMVVGDNTSERIAAP >Mature_498_residues MFDTDQAAGAVTRGAARPALLLAAAVLAFFTSAAQPQPQTSAASTFETDTELQAATRLFSAWLEGHMAQRGTPGVMVGVV HDQQLVWHKGFGFADVASQRPMTAQTRFRMASHSKMLTAIAVMQLREEGRLRLDDPVAQHLPWFKLKPAGDDDGPVTIEQ LLSHSSGLPREASDHWTSLQFPSRSELQALMAQRQSTFAPQVRWKYSNLAYGVAGQVVEQLSGQPFASYAQAHILGPLGM QDSSYDQDVPGLATPYGRRLPDGTRVSFPFVDARGLAAATGLTSTLDDMVKFVSAQFRRGPRGGTQIISSGSLREMHRVR SVDENWSVGTGLGFLTTRINNKSYVGHGGGYPGYTTQTLFHLGDKLGVIVLTNSADSGVNDIARQAIAAFGPPVAKVAAA GATTPAWDPAWARFQGMYRSRGGDTFVVMLNKRLVLLGASAAGIDAATRLEPLGNGHFRLDSATGGPPVGEVVYFQEGSG KPMRMVVGDNTSERIAAP
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI26051231, Length=148, Percent_Identity=34.4594594594595, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI26051233, Length=142, Percent_Identity=35.2112676056338, Blast_Score=81, Evalue=3e-15, Organism=Escherichia coli, GI87082101, Length=390, Percent_Identity=24.8717948717949, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786574, Length=282, Percent_Identity=26.241134751773, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790593, Length=263, Percent_Identity=25.8555133079848, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533026, Length=399, Percent_Identity=26.8170426065163, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17550934, Length=189, Percent_Identity=25.9259259259259, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17565630, Length=327, Percent_Identity=25.0764525993884, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 53315; Mature: 53315
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDTDQAAGAVTRGAARPALLLAAAVLAFFTSAAQPQPQTSAASTFETDTELQAATRLFS CCCCCHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH AWLEGHMAQRGTPGVMVGVVHDQQLVWHKGFGFADVASQRPMTAQTRFRMASHSKMLTAI HHHHHHHHCCCCCCEEEEEEECCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH AVMQLREEGRLRLDDPVAQHLPWFKLKPAGDDDGPVTIEQLLSHSSGLPREASDHWTSLQ HHHHHHHCCCCEECCHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC FPSRSELQALMAQRQSTFAPQVRWKYSNLAYGVAGQVVEQLSGQPFASYAQAHILGPLGM CCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC QDSSYDQDVPGLATPYGRRLPDGTRVSFPFVDARGLAAATGLTSTLDDMVKFVSAQFRRG CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PRGGTQIISSGSLREMHRVRSVDENWSVGTGLGFLTTRINNKSYVGHGGGYPGYTTQTLF CCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCHHHHHHH HLGDKLGVIVLTNSADSGVNDIARQAIAAFGPPVAKVAAAGATTPAWDPAWARFQGMYRS HCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC RGGDTFVVMLNKRLVLLGASAAGIDAATRLEPLGNGHFRLDSATGGPPVGEVVYFQEGSG CCCCEEEEEECCEEEEEECCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCC KPMRMVVGDNTSERIAAP CEEEEEECCCCCCCCCCC >Mature Secondary Structure MFDTDQAAGAVTRGAARPALLLAAAVLAFFTSAAQPQPQTSAASTFETDTELQAATRLFS CCCCCHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH AWLEGHMAQRGTPGVMVGVVHDQQLVWHKGFGFADVASQRPMTAQTRFRMASHSKMLTAI HHHHHHHHCCCCCCEEEEEEECCEEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH AVMQLREEGRLRLDDPVAQHLPWFKLKPAGDDDGPVTIEQLLSHSSGLPREASDHWTSLQ HHHHHHHCCCCEECCHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC FPSRSELQALMAQRQSTFAPQVRWKYSNLAYGVAGQVVEQLSGQPFASYAQAHILGPLGM CCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC QDSSYDQDVPGLATPYGRRLPDGTRVSFPFVDARGLAAATGLTSTLDDMVKFVSAQFRRG CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PRGGTQIISSGSLREMHRVRSVDENWSVGTGLGFLTTRINNKSYVGHGGGYPGYTTQTLF CCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCHHHHHHH HLGDKLGVIVLTNSADSGVNDIARQAIAAFGPPVAKVAAAGATTPAWDPAWARFQGMYRS HCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHC RGGDTFVVMLNKRLVLLGASAAGIDAATRLEPLGNGHFRLDSATGGPPVGEVVYFQEGSG CCCCEEEEEECCEEEEEECCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCC KPMRMVVGDNTSERIAAP CEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA