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The map label for this gene is ygiD [H]

Identifier: 124265949

GI number: 124265949

Start: 784298

End: 785176

Strand: Reverse

Name: ygiD [H]

Synonym: Mpe_A0756

Alternate gene names: 124265949

Gene position: 785176-784298 (Counterclockwise)

Preceding gene: 124265953

Following gene: 124265945

Centisome position: 19.41

GC content: 76.68

Gene sequence:

>879_bases
ATGGCAGGCATGAGCACCACCGCACCTGCCACTCCCCTGCCCGCCCTGTTCGTCTCGCACGGCTCGCCGATGCTGGCGCT
GGAGCCGGGCCGCACCGGGCCGTTCTTCCGGCGCCTGGGCCAGACCATCGACACGCGCTTCGGCCGGCCCAAGGCCATCG
TGGTGGTGTCGCCGCACACCGCCGCGCGCCTGCCGCTGGTGCTGGGCAGCGCCCAGCACCACGCGGTGCACGACTTCGGC
GGCTTTCCGCCCGCGCTGTACGAGCTGCAGTACGGCCCGCCCGGCGCGCCGACGCTGGCCACGCGCGTGAGTGCGCTGCT
GGCCGCGGCCGGCATCGCCGCGCACCCCAGCGACGAGGCGGGGCTGGACCACGGCATCTGGGCGGTGCTGCGCTTCGCGT
GGCCCGACGCCGACGTGCCGGTGCTGCCGGTGGCGCTGGCGCCGCATCAGCCGCCCGCGGCGCAGTGGGCGTTGGGCGAG
GCGCTGGCGCCGCTGCTGGCCGAGGGCGTGCTGGTGCTGGGCAGCGGCAGCCTCACGCACAACCTGCAGCTGGTGTTCGG
CCGGCGCCGGGTCGACGCGCTCGGCGCCGAGGACGGCGAAGAAATGGCCGAGAGCCGGGCCTTCCGCGACTGGGTGGCCG
GCCGCAGCGCCGCGCGCGACCGCGACGCGCTGCTGGCCTACCGCACGCAGGCGCCGCACGCGGCGCTGATGCACCCGACC
GACGAGCACTGGCTGCCGTTCTACATCGCCGCCGGGGCCGGCGGGCTGGCGGCGCCCGGGCTGCGGCTGCACGACGCGGT
GACCTACGGCTGCCTGGCGATGGATGCCTATGCCTTCGGGGCGGGCGCGCAGCCGCTGGCGGAGGCGCTGGCGGCTTGA

Upstream 100 bases:

>100_bases
AACGACCGGTAACCGCCGCCGCGGTCGTTCGCCCTCCCTCACCCCCACCGAACGCTGCATGCAAACCCGCTGAACCCCGC
CCCGCCGCGGCGGTGATGCA

Downstream 100 bases:

>100_bases
CCCCGCCGCCCTCACCTCACCGCAGCGCCCCCGGCCTCAGCCTCAGCACTTCCAGCGGCGTGACCGGCGCCGCGTCGTTG
CCCCAGGCACCGCGCACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAGMSTTAPATPLPALFVSHGSPMLALEPGRTGPFFRRLGQTIDTRFGRPKAIVVVSPHTAARLPLVLGSAQHHAVHDFG
GFPPALYELQYGPPGAPTLATRVSALLAAAGIAAHPSDEAGLDHGIWAVLRFAWPDADVPVLPVALAPHQPPAAQWALGE
ALAPLLAEGVLVLGSGSLTHNLQLVFGRRRVDALGAEDGEEMAESRAFRDWVAGRSAARDRDALLAYRTQAPHAALMHPT
DEHWLPFYIAAGAGGLAAPGLRLHDAVTYGCLAMDAYAFGAGAQPLAEALAA

Sequences:

>Translated_292_residues
MAGMSTTAPATPLPALFVSHGSPMLALEPGRTGPFFRRLGQTIDTRFGRPKAIVVVSPHTAARLPLVLGSAQHHAVHDFG
GFPPALYELQYGPPGAPTLATRVSALLAAAGIAAHPSDEAGLDHGIWAVLRFAWPDADVPVLPVALAPHQPPAAQWALGE
ALAPLLAEGVLVLGSGSLTHNLQLVFGRRRVDALGAEDGEEMAESRAFRDWVAGRSAARDRDALLAYRTQAPHAALMHPT
DEHWLPFYIAAGAGGLAAPGLRLHDAVTYGCLAMDAYAFGAGAQPLAEALAA
>Mature_291_residues
AGMSTTAPATPLPALFVSHGSPMLALEPGRTGPFFRRLGQTIDTRFGRPKAIVVVSPHTAARLPLVLGSAQHHAVHDFGG
FPPALYELQYGPPGAPTLATRVSALLAAAGIAAHPSDEAGLDHGIWAVLRFAWPDADVPVLPVALAPHQPPAAQWALGEA
LAPLLAEGVLVLGSGSLTHNLQLVFGRRRVDALGAEDGEEMAESRAFRDWVAGRSAARDRDALLAYRTQAPHAALMHPTD
EHWLPFYIAAGAGGLAAPGLRLHDAVTYGCLAMDAYAFGAGAQPLAEALAA

Specific function: Unknown

COG id: COG3384

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DODA-type extradiol aromatic ring- opening dioxygenase family [H]

Homologues:

Organism=Escherichia coli, GI226510974, Length=274, Percent_Identity=33.9416058394161, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014436
- InterPro:   IPR004183 [H]

Pfam domain/function: PF02900 LigB [H]

EC number: NA

Molecular weight: Translated: 30440; Mature: 30309

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGMSTTAPATPLPALFVSHGSPMLALEPGRTGPFFRRLGQTIDTRFGRPKAIVVVSPHT
CCCCCCCCCCCCCCHHEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
AARLPLVLGSAQHHAVHDFGGFPPALYELQYGPPGAPTLATRVSALLAAAGIAAHPSDEA
HHHCCEEECCCCHHHHHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
GLDHGIWAVLRFAWPDADVPVLPVALAPHQPPAAQWALGEALAPLLAEGVLVLGSGSLTH
CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCE
NLQLVFGRRRVDALGAEDGEEMAESRAFRDWVAGRSAARDRDALLAYRTQAPHAALMHPT
EEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCEEEECCC
DEHWLPFYIAAGAGGLAAPGLRLHDAVTYGCLAMDAYAFGAGAQPLAEALAA
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
AGMSTTAPATPLPALFVSHGSPMLALEPGRTGPFFRRLGQTIDTRFGRPKAIVVVSPHT
CCCCCCCCCCCCCHHEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
AARLPLVLGSAQHHAVHDFGGFPPALYELQYGPPGAPTLATRVSALLAAAGIAAHPSDEA
HHHCCEEECCCCHHHHHHCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
GLDHGIWAVLRFAWPDADVPVLPVALAPHQPPAAQWALGEALAPLLAEGVLVLGSGSLTH
CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCE
NLQLVFGRRRVDALGAEDGEEMAESRAFRDWVAGRSAARDRDALLAYRTQAPHAALMHPT
EEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCEEEECCC
DEHWLPFYIAAGAGGLAAPGLRLHDAVTYGCLAMDAYAFGAGAQPLAEALAA
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1314093; 9278503 [H]