| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265953
Identifier: 124265953
GI number: 124265953
Start: 790245
End: 791084
Strand: Reverse
Name: 124265953
Synonym: Mpe_A0760
Alternate gene names: NA
Gene position: 791084-790245 (Counterclockwise)
Preceding gene: 124265954
Following gene: 124265949
Centisome position: 19.56
GC content: 69.29
Gene sequence:
>840_bases GTGACCGGTCAGGCGCCGCAGGGCTGGAAAAGGGCCTTCTCCATCGAAGTGCGTCACGCCGGCTTCGATGAGGCGGGGGC CTCCGTGCCCGTCGCGTGGCAACTGGTGGAGCCGCCTCCGGCACGGCTTTCAGCGTTGGGGCTGATCTGCCGCGCTGAGC ACCAGGGACTGTCTGTCTTCGGGTCCGAGGGTTCGGGCGGCGACACCACGGTCGACCTGCTGTTTCAACTCACCGCGACG GACCCCGCGTTCTTCGCGTACACCGACATCGACCGCGCGGACGGGGACTCCACGCTGTGGTTCGACAGCACCACGGCTCC TGCCCCTGACGGCGGCAGCGGCAGCGCTCGCAGGCTGCATGAGGGCGCGACCGTCTCCGCGGCCGACCGGGCCGCACGGG ACGCGCTGCCCCTGCAGCGCTCGATCACGCAGCACGTCCCGAGTTCGCTCCTCGGCTACGTGCGCATCCGGTGGTCGTCG GCCGACCCCCTGGCTACGGCCTGGTTCATCGCCTTCGATGCCCGCGCGGTCGTCTGGAGGTATTCGGTGCATGGCGCTGC GGGCCGCGCCCTCTTCATCCGCGACGCGGAGGGCCAGGTCGATTTCGAGCCGGCCACCGCCACGCTGGCGCCGGGCCCCA CCGACACCGTGATCCTGCGCTCCACGGCGGCGATTCCGTTGACGCAACATGCGCTGCGCCACTTCCAGCTCATGGAGGTG ACTCCTCACGGTGAGCGGTTGCTGATCCATCGTCTGCCCGCCCCATCGCCGAGCGCCTTGGTCAAGGAAACGGTGAATGG CCGTGTGCTCACGGTGGCCGAGATCGATGTCGATCTCTGA
Upstream 100 bases:
>100_bases TGACCCACTGAACAAGGGGCTTGGCGGCGGGCTCCAGCACCCGCCACCGCTTCGCCGATGGTTTCCGGTGCAGCCCCGAG CACACATCCGAGGAGTCAGC
Downstream 100 bases:
>100_bases GGGCGAGCGTGCGATTGCCGGGCAGCGATGTGGATGAAGGCTTGGAGACCTCGGGACAGGCAGAAATCTGATCGACGGGC GCTGCGGACGAGGACAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTGQAPQGWKRAFSIEVRHAGFDEAGASVPVAWQLVEPPPARLSALGLICRAEHQGLSVFGSEGSGGDTTVDLLFQLTAT DPAFFAYTDIDRADGDSTLWFDSTTAPAPDGGSGSARRLHEGATVSAADRAARDALPLQRSITQHVPSSLLGYVRIRWSS ADPLATAWFIAFDARAVVWRYSVHGAAGRALFIRDAEGQVDFEPATATLAPGPTDTVILRSTAAIPLTQHALRHFQLMEV TPHGERLLIHRLPAPSPSALVKETVNGRVLTVAEIDVDL
Sequences:
>Translated_279_residues MTGQAPQGWKRAFSIEVRHAGFDEAGASVPVAWQLVEPPPARLSALGLICRAEHQGLSVFGSEGSGGDTTVDLLFQLTAT DPAFFAYTDIDRADGDSTLWFDSTTAPAPDGGSGSARRLHEGATVSAADRAARDALPLQRSITQHVPSSLLGYVRIRWSS ADPLATAWFIAFDARAVVWRYSVHGAAGRALFIRDAEGQVDFEPATATLAPGPTDTVILRSTAAIPLTQHALRHFQLMEV TPHGERLLIHRLPAPSPSALVKETVNGRVLTVAEIDVDL >Mature_278_residues TGQAPQGWKRAFSIEVRHAGFDEAGASVPVAWQLVEPPPARLSALGLICRAEHQGLSVFGSEGSGGDTTVDLLFQLTATD PAFFAYTDIDRADGDSTLWFDSTTAPAPDGGSGSARRLHEGATVSAADRAARDALPLQRSITQHVPSSLLGYVRIRWSSA DPLATAWFIAFDARAVVWRYSVHGAAGRALFIRDAEGQVDFEPATATLAPGPTDTVILRSTAAIPLTQHALRHFQLMEVT PHGERLLIHRLPAPSPSALVKETVNGRVLTVAEIDVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29821; Mature: 29690
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQAPQGWKRAFSIEVRHAGFDEAGASVPVAWQLVEPPPARLSALGLICRAEHQGLSVF CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHEEEECCCCEEEE GSEGSGGDTTVDLLFQLTATDPAFFAYTDIDRADGDSTLWFDSTTAPAPDGGSGSARRLH ECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH EGATVSAADRAARDALPLQRSITQHVPSSLLGYVRIRWSSADPLATAWFIAFDARAVVWR CCCEECHHHHHHHHCCCHHHHHHHHCHHHHEEEEEEEECCCCCCCEEEEEEECCEEEEEE YSVHGAAGRALFIRDAEGQVDFEPATATLAPGPTDTVILRSTAAIPLTQHALRHFQLMEV EEECCCCCCEEEEECCCCCEEECCCEEEECCCCCCEEEEEECCCCCHHHHHHHCEEEEEE TPHGERLLIHRLPAPSPSALVKETVNGRVLTVAEIDVDL CCCCCEEEEEECCCCCHHHHHHHCCCCEEEEEEEEEECC >Mature Secondary Structure TGQAPQGWKRAFSIEVRHAGFDEAGASVPVAWQLVEPPPARLSALGLICRAEHQGLSVF CCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHEEEECCCCEEEE GSEGSGGDTTVDLLFQLTATDPAFFAYTDIDRADGDSTLWFDSTTAPAPDGGSGSARRLH ECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH EGATVSAADRAARDALPLQRSITQHVPSSLLGYVRIRWSSADPLATAWFIAFDARAVVWR CCCEECHHHHHHHHCCCHHHHHHHHCHHHHEEEEEEEECCCCCCCEEEEEEECCEEEEEE YSVHGAAGRALFIRDAEGQVDFEPATATLAPGPTDTVILRSTAAIPLTQHALRHFQLMEV EEECCCCCCEEEEECCCCCEEECCCEEEECCCCCCEEEEEECCCCCHHHHHHHCEEEEEE TPHGERLLIHRLPAPSPSALVKETVNGRVLTVAEIDVDL CCCCCEEEEEECCCCCHHHHHHHCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA